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Paper Details

Benchmarking causal reasoning algorithms for gene expression-based compound mechanism of action analysis.
BMC Bioinformatics
4
2023
978 'landmark' genes, DEGs, LINCS L1000, MetaBase, Omnipath, SigNet
Author NameAffiliation
David A Collier
David A CollierKings's College London
David A CollierGenetic and Genomic Consulting Ltd
David A Collier
David A CollierKings's College London
David A CollierGenetic and Genomic Consulting Ltd
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Datasets

MetaBaseWiki database of biological databasesLink
MetaBaseWiki database of biological databasesLink
MetaBaseWiki database of biological databasesLink
MetaBaseWiki database of biological databasesLink
ReactomeA manually curated, peer-reviewed database of biomolecular pathways.Link
ReactomeA database of metabolic and signaling pathwaysLink
ReactomeA manually curated, peer-reviewed database of biomolecular pathways.Link
ReactomeA database of metabolic and signaling pathwaysLink
ReactomeA database of metabolic and signaling pathwaysLink
ReactomeA database of metabolic and signaling pathwaysLink
ReactomeA database of metabolic and signaling pathwaysLink
ReactomeA database of metabolic and signaling pathwaysLink
ReactomeA database of metabolic and signaling pathwaysLink
ReactomeA database of metabolic and signaling pathwaysLink
ReactomeA database of metabolic and signaling pathwaysLink