Skip to Main Content

Paper Details

The ProteomeXchange consortium at 10 years: 2023 update.
Nucleic Acids Res
129
2023
Universal Spectrum Identifiers, human
Author NameAffiliation
Eric W DeutschInstitute for Systems Biology
Eric W DeutschInstitute for Systems Biology
Nuno BandeiraCenter for Computational Mass Spectrometry, University of California, San Diego (university of california san diego)
Nuno BandeiraSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego (university of california san diego)
Nuno BandeiraUniversity of California, San Diego (university of california san diego)
Nuno BandeiraCenter for Computational Mass Spectrometry, University of California, San Diego (university of california san diego)
Nuno BandeiraUniversity of California, San Diego (university of california san diego)
Nuno BandeiraSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego (university of california san diego)
Yasset Perez-RiverolEuropean Bioinformatics Institute (EMBL-EBI)
Yasset Perez-RiverolEuropean Bioinformatics Institute (EMBL-EBI)
Vagisha SharmaUniversity of Washington
Brendan MacLeanUniversity of Washington
Michael J MacCossUniversity of Washington
Michael J MacCossUniversity of Washington
Yasushi IshihamaGraduate School of Pharmaceutical Sciences, Kyoto University
Juan Antonio Vizca??noEuropean Bioinformatics Institute (EMBL-EBI)
Juan Antonio Vizca??noEuropean Bioinformatics Institute (EMBL-EBI)
  • 1 - 17

Datasets

PeptideAtlasPeptides identified in LC-MS/MS proteomics experimentsLink
PeptideAtlasPeptideAtlas is a multi-organism, publicly accessible compendium of peptides identified in a large set of tandem mass spectrometry proteomics experiments. Mass spectrometer output files are collected for human, mouse, yeast, and several other organisms, and searched using the latest search engines and protein sequences. All results of sequence and spectral library searching are subsequently processed through the Trans Proteomic Pipeline to derive a probability of correct identification for all results in a uniform manner to insure a high-quality database, along with false discovery rates at the whole atlas level. Results may be queried and browsed at the PeptideAtlas web site. The raw data, search results, and full builds can also be downloaded for other uses.Link
PeptideAtlasPeptides identified in LC-MS/MS proteomics experimentsLink
PeptideAtlasPeptideAtlas is a multi-organism, publicly accessible compendium of peptides identified in a large set of tandem mass spectrometry proteomics experiments. Mass spectrometer output files are collected for human, mouse, yeast, and several other organisms, and searched using the latest search engines and protein sequences. All results of sequence and spectral library searching are subsequently processed through the Trans Proteomic Pipeline to derive a probability of correct identification for all results in a uniform manner to insure a high-quality database, along with false discovery rates at the whole atlas level. Results may be queried and browsed at the PeptideAtlas web site. The raw data, search results, and full builds can also be downloaded for other uses.Link
PeptideAtlasPeptides identified in LC-MS/MS proteomics experimentsLink
PeptideAtlasPeptides identified in LC-MS/MS proteomics experimentsLink
PeptideAtlasPeptideAtlas is a multi-organism, publicly accessible compendium of peptides identified in a large set of tandem mass spectrometry proteomics experiments. Mass spectrometer output files are collected for human, mouse, yeast, and several other organisms, and searched using the latest search engines and protein sequences. All results of sequence and spectral library searching are subsequently processed through the Trans Proteomic Pipeline to derive a probability of correct identification for all results in a uniform manner to insure a high-quality database, along with false discovery rates at the whole atlas level. Results may be queried and browsed at the PeptideAtlas web site. The raw data, search results, and full builds can also be downloaded for other uses.Link
PeptideAtlasPeptides identified in LC-MS/MS proteomics experimentsLink
PeptideAtlasPeptideAtlas is a multi-organism, publicly accessible compendium of peptides identified in a large set of tandem mass spectrometry proteomics experiments. Mass spectrometer output files are collected for human, mouse, yeast, and several other organisms, and searched using the latest search engines and protein sequences. All results of sequence and spectral library searching are subsequently processed through the Trans Proteomic Pipeline to derive a probability of correct identification for all results in a uniform manner to insure a high-quality database, along with false discovery rates at the whole atlas level. Results may be queried and browsed at the PeptideAtlas web site. The raw data, search results, and full builds can also be downloaded for other uses.Link
PeptideAtlasPeptides identified in LC-MS/MS proteomics experimentsLink
PeptideAtlasPeptides identified in LC-MS/MS proteomics experimentsLink
PeptideAtlasPeptides identified in LC-MS/MS proteomics experimentsLink
PeptideAtlasPeptides identified in LC-MS/MS proteomics experimentsLink
PeptideAtlasPeptideAtlas is a multi-organism, publicly accessible compendium of peptides identified in a large set of tandem mass spectrometry proteomics experiments. Mass spectrometer output files are collected for human, mouse, yeast, and several other organisms, and searched using the latest search engines and protein sequences. All results of sequence and spectral library searching are subsequently processed through the Trans Proteomic Pipeline to derive a probability of correct identification for all results in a uniform manner to insure a high-quality database, along with false discovery rates at the whole atlas level. Results may be queried and browsed at the PeptideAtlas web site. The raw data, search results, and full builds can also be downloaded for other uses.Link
PeptideAtlasPeptides identified in LC-MS/MS proteomics experimentsLink