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Paper Details

Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS.
Nat Protoc
1
2023
CoGAPS, learned, single, single-cell RNA
Author NameAffiliation
Ted LiefeldMoores Cancer Center, University of California San Diego
Ted LiefeldMoores Cancer Center, University of California San Diego
Loyal A GoffJohns Hopkins University
Loyal A GoffJohns Hopkins University
Loyal A GoffKavli Neurodiscovery Institute, Johns Hopkins University
Loyal A GoffJohns Hopkins University
Jill P MesirovMoores Cancer Center, University of California San Diego
Jill P MesirovMoores Cancer Center, University of California San Diego
Elana J FertigSidney Kimmel Comprehensive Cancer Center, Johns Hopkins University
Elana J FertigConvergence Institute, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University
Elana J FertigJohns Hopkins University
Elana J FertigJohns Hopkins University
Elana J FertigJohns Hopkins University
Genevieve L Stein-O'BrienSidney Kimmel Comprehensive Cancer Center, Johns Hopkins University
Genevieve L Stein-O'BrienConvergence Institute, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University
Genevieve L Stein-O'BrienJohns Hopkins University
Genevieve L Stein-O'BrienJohns Hopkins University
Genevieve L Stein-O'BrienKavli Neurodiscovery Institute, Johns Hopkins University
Genevieve L Stein-O'BrienJohns Hopkins University
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