Author details

Full Name

Yiqun Zhang

Affiliation

ORCID

Career Start Year

2006

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37292999	Longitudinal host transcriptional responses to SARS-CoV-2 infection in adults with extremely high viral load.	bioRxiv	2023
37704602	Global impact of somatic structural variation on the cancer proteome.	Nat Commun	2023
37279148	Comparative and integrative analysis of transcriptomic and epigenomic-wide DNA methylation changes in African American prostate cancer.		2023
37207808	Clinicopathologic Features and Prognosis of Melanoma in Northeast China: A Region-Based Cohort Study of 229 Consecutive Cases.		2023
37333115	Longitudinal host transcriptional responses to SARS-CoV-2 infection in adults with extremely high viral load.	Res Sq	2023
37172086	Efficient cancer modeling through CRISPR-Cas9/HDR-based somatic precision gene editing in mice.	Sci Adv	2023
36731467	Pan-cancer molecular subtypes of metastasis reveal distinct and evolving transcriptional programs.		2023
34999736	Elevated expression of the colony-stimulating factor 1 (CSF1) induces prostatic intraepithelial neoplasia dependent of epithelial-Gp130.	Oncogene	2022
36369237	Stromal FOXF2 suppresses prostate cancer progression and metastasis by enhancing antitumor immunity.	Nat Commun	2022
35948570	Author Correction: Proteogenomic characterization of 2002 human cancers reveals pan-cancer molecular subtypes and associated pathways.	Nat Commun	2022
35562349	Proteogenomic characterization of 2002 human cancers reveals pan-cancer molecular subtypes and associated pathways.	Nat Commun	2022
36070687	Ablating Lgr5-expressing prostatic stromal cells activates the ERK-mediated mechanosensory signaling and disrupts prostate tissue homeostasis.	Cell Rep	2022
36125617	Advanced Acral Melanoma Therapies: Current Status and Future Directions.	Current Treatment Options in Oncology	2022
36481652	Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations.	Nat Commun	2022
34788622	Rearrangement-mediated cis-regulatory alterations in advanced patient tumors reveal interactions with therapy.	Cell Rep	2021
33743584	SVExpress: identifying gene features altered recurrently in expression with nearby structural variant breakpoints.	BMC Bioinformatics	2021
33627787	Mass-spectrometry-based proteomic correlates of grade and stage reveal pathways and kinases associated with aggressive human cancers.	Oncogene	2021
33568653	A pediatric brain tumor atlas of genes deregulated by somatic genomic rearrangement.	Nat Commun	2021
33510359	Meta-analysis of host transcriptional responses to SARS-CoV-2 infection reveals their manifestation in human tumors.	Scientific Reports	2021
33554123	Systematic identification of non-coding somatic single nucleotide variants associated with altered transcription and DNA methylation in adult and pediatric cancers.		2021
33367832	Identification of diverse tumor endothelial cell populations in malignant glioma.	Neuro Oncol	2021
32627901	The Sca-1 and Sca-1 mouse prostatic luminal cell lineages are independently sustained.	Stem Cells	2020
31996845	PIK3CA variants selectively initiate brain hyperactivity during gliomagenesis.	Nature	2020
30878879	Functional Heterogeneity of Mouse Prostate Stromal Cells Revealed by Single-Cell RNA-Seq.	iScience	2019
31610796	Global impact of somatic structural variation on the DNA methylome of human cancers.	Genome Biol	2019
30401717	Molecular Correlates of Metastasis by Systematic Pan-Cancer Analysis Across The Cancer Genome Atlas.	Mol Cancer Res	2019
30982770	Spatially Restricted Stromal Wnt Signaling Restrains Prostate Epithelial Progenitor Growth through Direct and Indirect Mechanisms.	Cell Stem Cell	2019
31437244	Correction: Crosstalk from Non-Cancerous Mitochondria Can Inhibit Tumor Properties of Metastatic Cells by Suppressing Oncogenic Pathways.	PLoS ONE	2019
29581856	Fibroblast growth factor receptor signaling plays a key role in transformation induced by the TMPRSS2/ERG fusion gene and decreased PTEN.	Oncotarget	2018
29996110	A Pan-Cancer Compendium of Genes Deregulated by Somatic Genomic Rearrangement across More Than 1,400 Cases.	Cell Rep	2018
29229606	Coactivation of Estrogen Receptor and IKKÎ² Induces a Dormant Metastatic Phenotype in ER-Positive Breast Cancer.	Cancer Research	2018
29440175	Pan-Cancer Molecular Classes Transcending Tumor Lineage Across 32 Cancer Types, Multiple Data Platforms, and over 10,000 Cases.	Clinical Cancer Research	2018
28166219	Identification of diverse astrocyte populations and their malignant analogs.	Nat Neurosci	2017
28775315	Pan-urologic cancer genomic subtypes that transcend tissue of origin.	Nat Commun	2017
28947967	miR-33a is a tumor suppressor microRNA that is decreased in prostate cancer.	Oncotarget	2017
28528867	A Pan-Cancer Proteogenomic Atlas of PI3K/AKT/mTOR Pathway Alterations.	Cancer Cell	2017
28881599	Macrophages promote the progression of premalignant mammary lesions to invasive cancer.	Oncotarget	2017
28744021	Thy-1<sup>+</sup> Cancer-associated Fibroblasts Adversely Impact Lung Cancer Prognosis.	Sci Rep	2017
28611045	RGS12 Is a Novel Tumor-Suppressor Gene in African American Prostate Cancer That Represses AKT and MNX1 Expression.	Cancer Research	2017
27594448	Non-Cell-Autonomous Regulation of Prostate Epithelial Homeostasis by Androgen Receptor.	Mol Cell	2016
26923594	Fatty Acid Oxidation-Driven Src Links Mitochondrial Energy Reprogramming and Oncogenic Properties in Triple-Negative Breast Cancer.	Cell Rep	2016
26947078	Multilevel Genomics-Based Taxonomy of Renal Cell Carcinoma.	Cell Rep	2016
27578002	MNX1 Is Oncogenically Upregulated in African-American Prostate Cancer.	Cancer Research	2016
26019137	FGF23 promotes prostate cancer progression.	Oncotarget	2015
25753424	ErbB2 Pathway Activation upon Smad4 Loss Promotes Lung Tumor Growth and Metastasis.	Cell Rep	2015
25749044	Function of phosphorylation of NF-kB p65 ser536 in prostate cancer oncogenesis.	Oncotarget	2015
25701100	Ex vivo four-dimensional lung cancer model mimics metastasis.	Annals of Thoracic Surgery	2015
24569375	Agonistic induction of PPARÎ³ reverses cigarette smoke-induced emphysema.	Journal of Clinical Investigation	2014
25333263	Stromal TGF-Î² signaling induces AR activation in prostate cancer.	Oncotarget	2014
24305876	FGFR1-WNT-TGF-Î² signaling in prostate cancer mouse models recapitulates human reactive stroma.	Cancer Research	2014