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Author Details

Christiane Hertz-Fowler
Institute of Integrative Biology, University of Liverpool
2001
67
32
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36804636Genome-wide subcellular protein map for the flagellate parasite Trypanosoma brucei.Nat Microbiol2023
34718728VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center.Nucleic Acids Res2022
34472979Genome Assemblies across the Diverse Evolutionary Spectrum of <i>Leishmania</i> Protozoan Parasites.Microbiol Resour Announc2021
32272904Copy number variation in human genomes from three major ethno-linguistic groups in Africa.BMC Genomics2020
31999701Increasing prevalence of a fluoroquinolone resistance mutation amongst Campylobacter jejuni isolates from four human infectious intestinal disease studies in the United Kingdom.PLoS One2020
32340176Targeted Next-Generation Sequencing of 117 Routine Clinical Samples Provides Further Insights into the Molecular Landscape of Uveal Melanoma.Cancers (Basel)2020
30908482Association between IL1 gene polymorphism and human African trypanosomiasis in populations of sleeping sickness foci of southern Cameroon.PLoS Negl Trop Dis2019
30943202Application of long read sequencing to determine expressed antigen diversity in Trypanosoma brucei infections.PLoS Negl Trop Dis2019
30914286Macrophage migrating inhibitory factor expression is associated with Trypanosoma brucei gambiense infection and is controlled by trans-acting expression quantitative trait loci in the Guinean population.Infect Genet Evol2019
29470556No evidence for association between APOL1 kidney disease risk alleles and Human African Trypanosomiasis in two Ugandan populations.PLoS Negl Trop Dis2018
30165630The Structure of a Conserved Telomeric Region Associated with Variant Antigen Loci in the Blood Parasite Trypanosoma congolense.Genome Biol Evol2018
30152809FungiDB: An Integrated Bioinformatic Resource for Fungi and Oomycetes.J Fungi (Basel)2018
27903906EuPathDB: the eukaryotic pathogen genomics database resource.Nucleic Acids Res2017
29059176Candidate genes-based investigation of susceptibility to Human African Trypanosomiasis in Côte d'Ivoire.PLoS Negl Trop Dis2017
29077717A polymorphism in the haptoglobin, haptoglobin related protein locus is associated with risk of human sleeping sickness within Cameroonian populations.PLoS Negl Trop Dis2017
28570558Introducing the TrypanoGEN biobank: A valuable resource for the elimination of human African trypanosomiasis.PLoS Negl Trop Dis2017
28701143SMRT Gate: A method for validation of synthetic constructs on Pacific Biosciences sequencing platforms.Biotechniques2017
28877583Leaf LIMS: A Flexible Laboratory Information Management System with a Synthetic Biology Focus.ACS Synth Biol2017
28827791Candidate gene polymorphisms study between human African trypanosomiasis clinical phenotypes in Guinea.PLoS Negl Trop Dis2017
27105845Companion: a web server for annotation and analysis of parasite genomes.Nucleic Acids Res2016
28955465Current challenges of research on filamentous fungi in relation to human welfare and a sustainable bio-economy: a white paper.Fungal Biol Biotechnol2016
26656699Investigating the Influence of Ribavirin on Human Respiratory Syncytial Virus RNA Synthesis by Using a High-Resolution Transcriptome Sequencing Approach.J Virol2016
27284025GeneMill: A 21st century platform for innovation.Biochem Soc Trans2016
25300491TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei.Nucleic Acids Res2015
25855049Corrigendum: Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes.Nat Commun2015
25502887Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes.Nat Protoc2015
25568942Genome and phylogenetic analyses of Trypanosoma evansi reveal extensive similarity to T. brucei and multiple independent origins for dyskinetoplasty.PLoS Negl Trop Dis2015
24909122Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes.Nat Commun2014
25416632Elucidating variations in the nucleotide sequence of Ebola virus associated with increasing pathogenicity.Genome Biol2014
23556014A cell-surface phylome for African trypanosomes.PLoS Negl Trop Dis2013
22116062GeneDB--an annotation database for pathogens.Nucleic Acids Res2012
22331916Antigenic diversity is generated by distinct evolutionary mechanisms in African trypanosome species.Proc Natl Acad Sci U S A2012
22074189Expression of chemosensory proteins in the tsetse fly Glossina morsitans morsitans is related to female host-seeking behaviour.Insect Mol Biol2012
21354217Differential protein expression throughout the life cycle of Trypanosoma congolense, a major parasite of cattle in Africa.Mol Biochem Parasitol2011
22038252Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.Genome Res2011
22038251Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance.Genome Res2011
21664383TSIDER1, a short and non-autonomous Salivarian trypanosome-specific retroposon related to the ingi6 subclade.Mol Biochem Parasitol2011
21363968High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome.Genome Res2011
20012146Characterisations of odorant-binding proteins in the tsetse fly Glossina morsitans morsitans.Cell Mol Life Sci2010
20808766Identification of attractive drug targets in neglected-disease pathogens using an in silico approach.PLoS Negl Trop Dis2010
20706279Plant killers on the spot.Nat Rev Microbiol2010
20404998The genome sequence of Trypanosoma brucei gambiense, causative agent of chronic human african trypanosomiasis.PLoS Negl Trop Dis2010
19843604TriTrypDB: a functional genomic resource for the Trypanosomatidae.Nucleic Acids Res2010
19966032Multiple genetic mechanisms lead to loss of functional TbAT1 expression in drug-resistant trypanosomes.Eukaryot Cell2010
19219050Plasmodium genomics: latest milestone.Nat Rev Microbiol2009
19666780Trypanosomatid genomes contain several subfamilies of ingi-related retroposons.Eukaryot Cell2009
19606141The genome of the blood fluke Schistosoma mansoni.Nature2009
19834478Unity in diversity: lessons from Candida.Nat Rev Microbiol2009
19440370Discovery of mating in the major African livestock pathogen Trypanosoma congolense.PLoS One2009
19559733Analysis of expressed sequence tags from the four main developmental stages of Trypanosoma congolense.Mol Biochem Parasitol2009
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Collaborators

Matthew Berriman
Wellcome Sanger Institute
Co-authored papers 29
Neil Hall
Earlham Institute
Co-authored papers 13
Martin Aslett
The Wellcome Trust Sanger Institute
Co-authored papers 10
Arnab Pain
King Abdullah University of Science and Technology
Co-authored papers 8
Alasdair Ivens
University of Washington School of Medicine
Co-authored papers 7
David S Roos
University of Pennsylvania
Co-authored papers 7
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Co-authored papers 6
Bart Barrell
Wellcome Trust Sanger Institute
Co-authored papers 6
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University of Pennsylvania
Co-authored papers 5
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Perelman School of Medicine, University of Pennsylvania
Co-authored papers 4
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University of Georgia
Co-authored papers 4
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Co-authored papers 4
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Broad Institute of MIT and Harvard
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Seattle Children's Research Institute
Co-authored papers 3
Elodie Ghedin
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University of Dundee
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University of Pennsylvania
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Bindu Gajria
University of Pennsylvania
Co-authored papers 3
Sascha Steinbiss
Wellcome Sanger Institute
Co-authored papers 3
Jennifer R Wortman
Broad Institute of MIT and Harvard
Co-authored papers 3
Wesley C Van Voorhis
Center for Emerging and Re-emerging Infectious Diseases, University of Washington
Co-authored papers 2
Kim Rutherford
University of Cambridge
Co-authored papers 2
Valerie Wood
University of Cambridge
Co-authored papers 2
Santiago J Carmona
AGORA Cancer Research Center
Co-authored papers 2
Bissan Al-Lazikani
The University of Texas MD Anderson Cancer Center
Co-authored papers 2
Alejandro Sanchez-Flores
Co-authored papers 2
Deborah F Pinney
University of Pennsylvania
Co-authored papers 2
Maria A Doyle
Peter MacCallum Cancer Centre
Co-authored papers 2
Dhanasekaran Shanmugam
CSIR - National Chemical Laboratory
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Release 1.2