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Author Details

Charles Plessy
Okinawa Institute of Science and Technology
2001
55
25
PMIDPaper TitleJournal TitlePublished Year
37074130Correction: Speed variations of bacterial replisomes.Elife2023
37074130Correction: Speed variations of bacterial replisomes.Elife2023
35877175Speed variations of bacterial replisomes.Elife2022
35961773Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs.Genome Res2022
35877175Speed variations of bacterial replisomes.Elife2022
35350547Automated phenol-chloroform extraction of high molecular weight genomic DNA for use in long-read single-molecule sequencing.F1000Res2022
35350547Automated phenol-chloroform extraction of high molecular weight genomic DNA for use in long-read single-molecule sequencing.F1000Res2022
35961773Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs.Genome Res2022
33404112Multi-omics analysis of hiPSCs-derived HLCs matured on-chip revealed patterns typical of liver regeneration.Biotechnol Bioeng2021
34011993Author Correction: RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions.Nat Commun2021
33781200Telomere-to-telomere assembly of the genome of an individual Oikopleura dioica from Okinawa using Nanopore-based sequencing.BMC Genomics2021
34027283Investigation of the hepatic development in the coculture of hiPSCs-derived LSECs and HLCs in a fluidic microenvironment.APL Bioeng2021
33711266Decoding Neuronal Diversification by Multiplexed Single-cell RNA-Seq.Stem Cell Reports2021
33404112Multi-omics analysis of hiPSCs-derived HLCs matured on-chip revealed patterns typical of liver regeneration.Biotechnol Bioeng2021
33711266Decoding Neuronal Diversification by Multiplexed Single-cell RNA-Seq.Stem Cell Reports2021
33781200Telomere-to-telomere assembly of the genome of an individual Oikopleura dioica from Okinawa using Nanopore-based sequencing.BMC Genomics2021
34011993Author Correction: RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions.Nat Commun2021
34027283Investigation of the hepatic development in the coculture of hiPSCs-derived LSECs and HLCs in a fluidic microenvironment.APL Bioeng2021
32563741Analysis of hiPSCs differentiation toward hepatocyte-like cells upon extended exposition to oncostatin.Differentiation2020
32025730Machine-driven parameter screen of biochemical reactions.Nucleic Acids Res2020
32364651Characterization of liver zonation-like transcriptomic patterns in HLCs derived from hiPSCs in a microfluidic biochip environment.Biotechnol Prog2020
31989141Transcriptome profiling of hiPSC-derived LSECs with nanoCAGE.Mol Omics2020
32094342RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions.Nat Commun2020
33093512Use of Cap Analysis Gene Expression to detect human papillomavirus promoter activity patterns at different disease stages.Sci Rep2020
32677034A genome database for a Japanese population of the larvacean Oikopleura dioica.Dev Growth Differ2020
32563741Analysis of hiPSCs differentiation toward hepatocyte-like cells upon extended exposition to oncostatin.Differentiation2020
32025730Machine-driven parameter screen of biochemical reactions.Nucleic Acids Res2020
31989141Transcriptome profiling of hiPSC-derived LSECs with nanoCAGE.Mol Omics2020
32094342RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions.Nat Commun2020
33093512Use of Cap Analysis Gene Expression to detect human papillomavirus promoter activity patterns at different disease stages.Sci Rep2020
32677034A genome database for a Japanese population of the larvacean Oikopleura dioica.Dev Growth Differ2020
32364651Characterization of liver zonation-like transcriptomic patterns in HLCs derived from hiPSCs in a microfluidic biochip environment.Biotechnol Prog2020
30664627C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution.Nat Commun2019
31612883Analysis of the transcription factors and their regulatory roles during a step-by-step differentiation of induced pluripotent stem cells into hepatocyte-like cells.Mol Omics2019
30664627C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution.Nat Commun2019
30883676Optimized protocol for the hepatic differentiation of induced pluripotent stem cells in a fluidic microenvironment.Biotechnol Bioeng2019
31612883Analysis of the transcription factors and their regulatory roles during a step-by-step differentiation of induced pluripotent stem cells into hepatocyte-like cells.Mol Omics2019
30883676Optimized protocol for the hepatic differentiation of induced pluripotent stem cells in a fluidic microenvironment.Biotechnol Bioeng2019
29045713SCPortalen: human and mouse single-cell centric database.Nucleic Acids Res2018
29045713SCPortalen: human and mouse single-cell centric database.Nucleic Acids Res2018
28791671Erratum to: NanoCAGE: A Method for the Analysis of Coding and Noncoding 5'-Capped Transcriptomes.Methods Mol Biol2017
28349422NanoCAGE: A Method for the Analysis of Coding and Noncoding 5'-Capped Transcriptomes.Methods Mol Biol2017
28972578Linking FANTOM5 CAGE peaks to annotations with CAGEscan.Sci Data2017
28791671Erratum to: NanoCAGE: A Method for the Analysis of Coding and Noncoding 5'-Capped Transcriptomes.Methods Mol Biol2017
28349422NanoCAGE: A Method for the Analysis of Coding and Noncoding 5'-Capped Transcriptomes.Methods Mol Biol2017
28972578Linking FANTOM5 CAGE peaks to annotations with CAGEscan.Sci Data2017
27071605Targeted reduction of highly abundant transcripts using pseudo-random primers.Biotechniques2016
27071605Targeted reduction of highly abundant transcripts using pseudo-random primers.Biotechniques2016
25505068Characterization of novel transcripts of human papillomavirus type 16 using cap analysis gene expression technology.J Virol2015
25505068Characterization of novel transcripts of human papillomavirus type 16 using cap analysis gene expression technology.J Virol2015
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Collaborators

Piero Carninci
RIKEN Center for Integrative Medical Sciences
Co-authored papers 31
Sachi Kato
RIKEN Center for Life Science Technologies
Co-authored papers 15
Yoshihide Hayashizaki
Center for Integrative Medical Sciences
Co-authored papers 14
Stefano Gustincich
Istituto Italiano di Tecnologia
Co-authored papers 10
Boris Lenhard
MRC London Institute of Medical Sciences
Co-authored papers 9
Alistair R R Forrest
RIKEN Center for Integrative Medical Sciences
Co-authored papers 8
Jun Kawai
RIKEN Center for Integrative Medical Sciences
Co-authored papers 8
Valerio Orlando
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 8
Nicolas Bertin
University Bordeaux, CNRS
Co-authored papers 8
Takeya Kasukawa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 8
Timo Lassmann
Telethon Kids Institute, University of Western Australia
Co-authored papers 7
Dejan Lazarevic
Co-authored papers 7
Dave S B Hoon
Saint John's Cancer Institute at Saint John's Health Center
Co-authored papers 7
Carsten O Daub
International Institute of Molecular and Cell Biology in Warsaw
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Matthias Harbers
CellFree Sciences Co.
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Jessica Severin
Center for Integrative Medical Sciences
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Harukazu Suzuki
RIKEN Center for Integrative Medical Sciences
Co-authored papers 6
Geoffrey J Faulkner
Mater Research Institute - University of Queensland
Co-authored papers 6
Hideya Kawaji
RIKEN Center for Integrative Medical Sciences
Co-authored papers 5
Takahiro Arakawa
Tokyo University of Technology
Co-authored papers 5
Erik Arner
RIKEN Center for Integrative Medical Sciences (IMS)
Co-authored papers 5
Shintaro Katayama
Folkhalsan Research Center
Co-authored papers 5
Thomas R Gingeras
Stanley Institute for Cognitive Genomics
Co-authored papers 5
David A Hume
Mater Research Institute-UQ, Translational Research Institute
Co-authored papers 5
Albin Sandelin
University of Copenhagen
Co-authored papers 5
Jay W Shin
Genome Institute of Singapore (GIS)
Co-authored papers 5
Alessandro Bonetti
RIKEN Center for Integrative Medical Sciences
Co-authored papers 5
Colin A Semple
Institute of Genetics and Cancer, University of Edinburgh
Co-authored papers 4
Altuna Akalin
Berlin Institute for Medical Systems Biology
Co-authored papers 4
Martin S Taylor
Institute of Genetics and Cancer, University of Edinburgh
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