Author details

Full Name

Sangsoo Kim

Affiliation

ORCID

Career Start Year

1998

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37512838	Potential Oral Microbial Markers for Differential Diagnosis of Crohn's Disease and Ulcerative Colitis Using Machine Learning Models.		2023
37835545	RNA-Seq-Based Molecular Classification Analyses in Colorectal Cancer and Synchronous Adenoma.		2023
37834250	Enrichment of Activated Fibroblasts as a Potential Biomarker for a Non-Durable Response to Anti-Tumor Necrosis Factor Therapy in Patients with Crohn's Disease.		2023
37813636	A streamlined pipeline based on HmmUFOtu for microbial community profiling using 16S rRNA amplicon sequencing.		2023
37523193	Regulatory Variants on the Leukocyte Immunoglobulin-Like Receptor Gene Cluster are Associated with Crohn's Disease and Interact with Regulatory Variants for TAP2.		2023
35101736	The association of genetic alterations with response rate in newly diagnosed chronic myeloid leukemia patients.	Leukemia Research	2022
35697726	Retraction Note: Computational Drug Repositioning for Gastric Cancer using Reversal Gene Expression Profiles.	Scientific Reports	2022
35743732	Development of a Machine Learning Model to Predict Non-Durable Response to Anti-TNF Therapy in Crohn's Disease Using Transcriptome Imputed from Genotypes.	Journal of Personalized Medicine	2022
36547492	Fully Automated Segmentation Models of Supratentorial Meningiomas Assisted by Inclusion of Normal Brain Images.		2022
34329170	Identification of Functional Microbial Modules Through Network-Based Analysis of Meta-Microbial Features Using Matrix Factorization.	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2022
34943601	Development of a Machine Learning Model to Distinguish between Ulcerative Colitis and Crohn's Disease Using RNA Sequencing Data.	Diagnostics	2021
33562363	Development of a Clinical and Genetic Prediction Model for Early Intestinal Resection in Patients with Crohn's Disease: Results from the IMPACT Study.	Journal of Clinical Medicine	2021
33602986	Characterization of HIV-1 recombinant and subtype B near full-length genome among men who have sex with men in South Korea.	Scientific Reports	2021
33376229	Deep Neural Network-Based Prediction of the Risk of Advanced Colorectal Neoplasia.	Gut and Liver	2021
33431871	The histone H3-lysine 4-methyltransferase Mll4 regulates the development of growth hormone-releasing hormone-producing neurons in the mouse hypothalamus.	Nat Commun	2021
33017870	A semi-automatic cell type annotation method for single-cell RNA sequencing dataset.		2020
32157096	Author Correction: Single cell transcriptome analysis of developing arcuate nucleus neurons uncovers their key developmental regulators.	Nat Commun	2020
32937136	PRC2 Acts as a Critical Timer That Drives Oligodendrocyte Fate over Astrocyte Identity by Repressing the Notch Pathway.	Cell Reports	2020
31399077	Accuracy of machine learning for differentiation between optic neuropathies and pseudopapilledema.	BMC Ophthalmology	2019
30804389	Computational Drug Repositioning for Gastric Cancer using Reversal Gene Expression Profiles.	Scientific Reports	2019
31420539	Single cell transcriptome analysis of developing arcuate nucleus neurons uncovers their key developmental regulators.	Nat Commun	2019
30682186	Correction: A deep learning model for the detection of both advanced and early glaucoma using fundus photography.	PLoS ONE	2019
30955190	Genetic risk score raises the risk of incidence of chronic kidney disease in Korean general population-based cohort.	Clin Exp Nephrol	2019
29795232	Dlx1/2 and Otp coordinate the production of hypothalamic GHRH- and AgRP-neurons.	Nat Commun	2018
30066908	Gene expression profiles for predicting antibodyâ¿¿mediated kidney allograft rejection: Analysis of GEO datasets.	International Journal of Molecular Medicine	2018
30481205	A deep learning model for the detection of both advanced and early glaucoma using fundus photography.	PLoS ONE	2018
29562348	Efficient pathway enrichment and network analysis of GWAS summary data using GSA-SNP2.	Nucleic Acids Research	2018
29307138	misMM: An Integrated Pipeline for Misassembly Detection Using Genotyping-by-Sequencing and Its Validation with BAC End Library Sequences and Gene Synteny.		2017
28991236	Corrigendum: An ethnically relevant consensus Korean reference genome is a step towards personal reference genomes.	Nat Commun	2017
29307145	IVAG: An Integrative Visualization Application for Various Types of Genomic Data Based on R-Shiny and the Docker Platform.		2017
28105934	ChARM: Discovery of combinatorial chromatin modification patterns in hepatitis B virus X-transformed mouse liver cancer using association rule mining.	BMC Bioinformatics	2016
27103888	Compiling Multicopy Single-Stranded DNA Sequences from Bacterial Genome Sequences.		2016
27802837	Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly.	Genome Biol	2016
27882922	An ethnically relevant consensus Korean reference genome is a step towards personal reference genomes.	Nat Commun	2016
28154513	Investigation of Splicing Quantitative Trait Loci in .		2016
27729838	Analysis of Nuclear Mitochondrial DNA Segments of Nine Plant Species: Size, Distribution, and Insertion Loci.		2016
26523131	The Construction of Regulatory Network for Insulin-Mediated Genes by Integrating Methods Based on Transcription Factor Binding Motifs and Gene Expression Variations.		2015
24509480	Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility.	Nat Genet	2014
25705155	In silico Identification of SFRP1 as a Hypermethylated Gene in Colorectal Cancers.		2014
25705154	Short reads phasing to construct haplotypes in genomic regions that are associated with body mass index in korean individuals.		2014
24270359	Minke whale genome and aquatic adaptation in cetaceans.	Nat Genet	2014
24286325	Gene-set based genome-wide association analysis for the speed of sound in two skeletal sites of Korean women.	BMB Reports	2014
24323136	DNA methylation analysis of CD4+ T cells in patients with psoriasis.	Archives of Dermatological Research	2014
23613675	Editor's Introduction to This Issue.		2013
24124409	Gene set analyses of genome-wide association studies on 49 quantitative traits measured in a single genetic epidemiology dataset.		2013
24124404	Editor's Introduction to This Issue.		2013
24045858	The tiger genome and comparative analysis with lion and snow leopard genomes.	Nat Commun	2013
23843770	Editor's Introduction to This Issue.		2013
24141358	Whole genome comparison of donor and cloned dogs.	Scientific Reports	2013
24465225	Editor's Introduction to This Issue.		2013