Author details

Full Name

Michael J Pazin

Affiliation

ORCID

Career Start Year

1991

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36640770	Elucidating the structure and function of the nucleus-The NIH Common Fund 4D Nucleome program.	Mol Cell	2023
25762420	Using the ENCODE Resource for Functional Annotation of Genetic Variants.	Cold Spring Harbor Protocols	2015
25164755	Comparative analysis of the transcriptome across distant species.	Nature	2014
25409824	A comparative encyclopedia of DNA elements in the mouse genome.	Nature	2014
25275169	Reply to Brunet and Doolittle: Both selected effect and causal role elements can influence human biology and disease.	Proc Natl Acad Sci U S A	2014
24753594	Defining functional DNA elements in the human genome.	Proc Natl Acad Sci U S A	2014
25164756	Comparative analysis of metazoan chromatin organization.	Nature	2014
25164757	Comparative analysis of regulatory information and circuits across distant species.	Nature	2014
21999456	ATP-dependent chromatin remodeling in T cells.	Biochemistry and Cell Biology	2012
22889292	An encyclopedia of mouse DNA elements (Mouse ENCODE).	Genome Biol	2012
22336179	IL-10 transcription is negatively regulated by BAF180, a component of the SWI/SNF chromatin remodeling enzyme.	BMC Immunol	2012
22955991	ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia.	Genome Res	2012
20947216	Molecular changes in brain aging and Alzheimer's disease are mirrored in experimentally silenced cortical neuron networks.	Neurobiol Aging	2012
21931736	CHD5, a brain-specific paralog of Mi2 chromatin remodeling enzymes, regulates expression of neuronal genes.	PLoS One	2011
21262765	Dynamic BRG1 recruitment during T helper differentiation and activation reveals distal regulatory elements.	Mol Cell Biol	2011
21831442	NF-ÎºB and BRG1 bind a distal regulatory element in the IL-3/GM-CSF locus.	Molecular Immunology	2011
21903926	Nontelomeric splice variant of telomere repeat-binding factor 2 maintains neuronal traits by sequestering repressor element 1-silencing transcription factor.	Proceedings of the National Academy of Sciences of the United States of America	2011
20471682	The SNF2H chromatin remodeling enzyme has opposing effects on cytokine gene expression.	Molecular Immunology	2010
20692357	Activation of heat shock factor 1 plays a role in pyrrolidine dithiocarbamate-mediated expression of the co-chaperone BAG3.	International Journal of Biochemistry and Cell Biology	2010
18988672	S-glutathionylation impairs signal transducer and activator of transcription 3 activation and signaling.	Endocrinology	2009
19158090	Mi2beta shows chromatin enzyme specificity by erasing a DNase I-hypersensitive site established by ACF.	Journal of Biological Chemistry	2009
18775324	Activation of 12/23-RSS-dependent RAG cleavage by hSWI/SNF complex in the absence of transcription.	Molecular Cell	2008
18818083	Nontelomeric TRF2-REST interaction modulates neuronal gene silencing and fate of tumor and stem cells.	Curr Biol	2008
18852284	BRG1-mediated chromatin remodeling regulates differentiation and gene expression of T helper cells.	Molecular and Cellular Biology	2008
17986852	Regulation of the CLDN3 gene in ovarian cancer cells.	Cancer Biology and Therapy	2007
21357044	In vitro transcription using Drosophila nuclear extracts.		2007
21357043	Preparation of nuclear extracts from Drosophila embryos.		2007
16469925	Histone H4-K16 acetylation controls chromatin structure and protein interactions.	Science	2006
16714763	Crucial roles of Sp1 and epigenetic modifications in the regulation of the CLDN4 promoter in ovarian cancer cells.	Journal of Biological Chemistry	2006
16024782	hnRNP K binds a core polypyrimidine element in the eukaryotic translation initiation factor 4E (eIF4E) promoter, and its regulation of eIF4E contributes to neoplastic transformation.	Molecular and Cellular Biology	2005
14660676	Combinatorial control of DNase I-hypersensitive site formation and erasure by immunoglobulin heavy chain enhancer-binding proteins.	Journal of Biological Chemistry	2004
14673175	Properties of ets-1 binding to chromatin and its effect on platelet factor 4 gene expression.	Molecular and Cellular Biology	2004
9852139	Promoter structure and transcriptional activation with chromatin templates assembled in vitro. A single Gal4-VP16 dimer binds to chromatin or to DNA with comparable affinity.	J Biol Chem	1998
9150131	What's up and down with histone deacetylation and transcription?	Cell	1997
9118215	SWI2/SNF2 and related proteins: ATP-driven motors that disrupt protein-DNA interactions?	Cell	1997
9115208	Nucleosome mobility and the maintenance of nucleosome positioning.	Science	1997
9230310	ACF, an ISWI-containing and ATP-utilizing chromatin assembly and remodeling factor.	Cell	1997
8557193	NF-kappa B-mediated chromatin reconfiguration and transcriptional activation of the HIV-1 enhancer in vitro.	Genes Dev	1996
7657162	Activation of the HIV-1 enhancer by the LEF-1 HMG protein on nucleosome-assembled DNA in vitro.	Genes Dev	1995
7801129	ATP-dependent nucleosome reconfiguration and transcriptional activation from preassembled chromatin templates.	Science	1994
1455504	Triggering signaling cascades by receptor tyrosine kinases.	Trends in Biochemical Sciences	1992
1845970	A functional soluble extracellular region of the platelet-derived growth factor (PDGF) beta-receptor antagonizes PDGF-stimulated responses.	Journal of Biological Chemistry	1991