Author details

Full Name

Sung-Hou Kim

Affiliation

University of California berkeley

ORCID

Career Start Year

1967

Papers

272

H Index

Expertise

CM4AI Collaborator

Andrej Sali (CM4AI)

PMID	Paper Title	Journal Title	Published Year
33234566	Reply to Li et al.: Organism tree of life: Gene phylogeny vs. whole-proteome phylogeny.	Proc Natl Acad Sci U S A	2020
32019884	Whole-proteome tree of life suggests a deep burst of organism diversity.	Proc Natl Acad Sci U S A	2020
29358382	Prediction of inherited genomic susceptibility to 20 common cancer types by a supervised machine-learning method.	Proc Natl Acad Sci U S A	2018
28808018	A genome Tree of Life for the Fungi kingdom.	Proc Natl Acad Sci U S A	2017
24449885	Empirical prediction of genomic susceptibilities for multiple cancer classes.	Proc Natl Acad Sci U S A	2014
24434556	Inhibition of master transcription factors in pluripotent cells induces early stage differentiation.	Proc Natl Acad Sci U S A	2014
21173226	Cardiomyocytes from phorbol myristate acetate-activated mesenchymal stem cells restore electromechanical function in infarcted rat hearts.	Proc Natl Acad Sci U S A	2011
21536867	Whole-genome phylogeny of Escherichia coli/Shigella group by feature frequency profiles (FFPs).	Proc Natl Acad Sci U S A	2011
20018669	Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution.	Proc Natl Acad Sci U S A	2010
18824233	High-throughput T7 LIC vector for introducing C-terminal poly-histidine tags with variable lengths without extra sequences.	Protein Expr Purif	2009
19805074	Whole-genome phylogeny of mammals: evolutionary information in genic and nongenic regions.	Proc Natl Acad Sci U S A	2009
19427902	Purification of human transcription factors Nanog and Sox2, each in complex with Skp, an Escherichia coli periplasmic chaperone.	Protein Expr Purif	2009
19553209	Whole-proteome phylogeny of large dsDNA virus families by an alignment-free method.	Proc Natl Acad Sci U S A	2009
19551896	Water polygons in high-resolution protein crystal structures.	Protein Sci	2009
19450691	Structure of human Brn-5 transcription factor in complex with CRH gene promoter.	J Struct Biol	2009
19188606	Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions.	Proc Natl Acad Sci U S A	2009
19307724	PDB Editor: a user-friendly Java-based Protein Data Bank file editor with a GUI.	Acta Crystallogr D Biol Crystallogr	2009
17847097	Structural and enzymatic characterization of DR1281: A calcineurin-like phosphoesterase from Deinococcus radiodurans.	Proteins	2008
18834200	Capturing hammerhead ribozyme structures in action by modulating general base catalysis.	PLoS Biol	2008
18952098	Structural and molecular genetic insight into a widespread sulfur oxidation pathway.	J Mol Biol	2008
18542885	Structural genomics of minimal organisms: pipeline and results.	Methods Mol Biol	2008
18480249	Chemicals that modulate stem cell differentiation.	Proc Natl Acad Sci U S A	2008
18323601	Crystallization and preliminary X-ray analysis of human Brn-5 transcription factor in complex with DNA.	Acta Crystallogr Sect F Struct Biol Cryst Commun	2008
18287029	Discovery of a selective inhibitor of oncogenic B-Raf kinase with potent antimelanoma activity.	Proc Natl Acad Sci U S A	2008
18235434	Protein production and purification.	Nat Methods	2008
17126029	Effect of osmotic stress and heat shock in recombinant protein overexpression and crystallization.	Protein Expr Purif	2007
17636568	Crystal structure of a transcriptional activator of comK gene from Bacillus halodurans.	Proteins	2007
17565173	Structure of O67745_AQUAE, a hypothetical protein from Aquifex aeolicus.	Acta Crystallogr Sect F Struct Biol Cryst Commun	2007
17764033	Structure-based inference of molecular functions of proteins of unknown function from Berkeley Structural Genomics Center.	J Struct Funct Genomics	2007
17348019	Crystal structure of a novel single-stranded DNA binding protein from Mycoplasma pneumoniae.	Proteins	2007
17275331	Crystal structure of the multidrug efflux transporter AcrB at 3.1A resolution reveals the N-terminal region with conserved amino acids.	J Struct Biol	2007
17360551	Global extent of horizontal gene transfer.	Proc Natl Acad Sci U S A	2007
16276528	Target selection and deselection at the Berkeley Structural Genomics Center.	Proteins	2006
16959887	Evolution of protein structural classes and protein sequence families.	Proc Natl Acad Sci U S A	2006
16522803	Crystal structure of the DUF16 domain of MPN010 from Mycoplasma pneumoniae.	Protein Sci	2006
16537409	A method for evaluating the structural quality of protein models by using higher-order phi-psi pairs scoring.	Proc Natl Acad Sci U S A	2006
16566839	Structural proteomics of minimal organisms: conservation of protein fold usage and evolutionary implications.	BMC Struct Biol	2006
16294331	Crystal structure of ScpB from Chlorobium tepidum, a protein involved in chromosome partitioning.	Proteins	2006
15468322	Crystal structure of flavin binding to FAD synthetase of Thermotoga maritima.	Proteins	2005
16511117	Structure of a NAD kinase from Thermotoga maritima at 2.3 A resolution.	Acta Crystallogr Sect F Struct Biol Cryst Commun	2005
16204885	Structure of the hypothetical Mycoplasma protein MPN555 suggests a chaperone function.	Acta Crystallogr D Biol Crystallogr	2005
16211516	On-column protein refolding for crystallization.	J Struct Funct Genomics	2005
16211501	Structural genomics of minimal organisms and protein fold space.	J Struct Funct Genomics	2005
16242963	Crystal structure of TM1457 from Thermotoga maritima.	J Struct Biol	2005
16242716	Crystal structures of an NAD kinase from Archaeoglobus fulgidus in complex with ATP, NAD, or NADP.	J Mol Biol	2005
16283428	Crystal structures of a phosphotransacetylase from Bacillus subtilis and its complex with acetyl phosphate.	J Struct Funct Genomics	2005
15937186	Crystal structure of the "PhoU-like" phosphate uptake regulator from Aquifex aeolicus.	J Bacteriol	2005
15815978	Structural characterization of an iron-sulfur cluster assembly protein IscU in a zinc-bound form.	Proteins	2005
15979091	Crystal structure of a heat-inducible transcriptional repressor HrcA from Thermotoga maritima: structural insight into DNA binding and dimerization.	J Mol Biol	2005
16104022	Structural and functional characterization of a 5,10-methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087).	Proteins	2005

1 - 50 of 272

Lester G Carter

Stanford University

Career Start Year 2004

Number of shared co-authors 13

Heath E Klock

Merck & Co., Inc.

Career Start Year 2002

Number of shared co-authors 5

Marc C Deller

Incyte Corporation

Career Start Year 2000

Number of shared co-authors 3

Stephen A McMahon

University of St Andrews

Career Start Year 1998

Number of shared co-authors 1

Sergey M Vorobiev

Columbia University

Career Start Year 1998

Number of shared co-authors 13

Hsiu-Ju Chiu

Joint Center for Structural Genomics

Career Start Year 1997

Number of shared co-authors 4

Qingping Xu

Argonne National Laboratory

Career Start Year 1996

Number of shared co-authors 4

Ashley M Deacon

Accelero Biostructures Inc., USA XPose Therapeutics Inc.

Career Start Year 1996

Number of shared co-authors 6

Lukasz Jaroszewski

University of California Riverside School of Medicine

Career Start Year 1995

Number of shared co-authors 12

Clemens Vonrhein

Global Phasing Ltd

Career Start Year 1995

Number of shared co-authors 4

Diana R Tomchick

University of Texas Southwestern Medical Center

Career Start Year 1993

Number of shared co-authors 1

Gye Won Han

Bridge Institute, University of Southern California

Career Start Year 1991

Number of shared co-authors 5

Dietlind L Gerloff

Foundation for Applied Molecular Evolution (FfAME)

Career Start Year 1991

Number of shared co-authors 0

Subbiah Parthasarathy

New York University Grossman School of Medicine

Career Start Year 1990

Number of shared co-authors 14

Wladek Minor

University of Virginia

Career Start Year 1989

Number of shared co-authors 26

Mitchell D Miller

Rice University

Career Start Year 1989

Number of shared co-authors 9

Marc-Andr?? Elsliger

Joint Center for Structural Genomics

Career Start Year 1989

Number of shared co-authors 5

Mark W Knuth

Joint Center for Structural Genomics

Career Start Year 1988

Number of shared co-authors 5

Adam Godzik

University of California Riverside

Career Start Year 1987

Number of shared co-authors 15

Mamoru Sato

Yokohama City University

Career Start Year 1982

Number of shared co-authors 2

Enrique Querol

Institut de Biotecnologia i Biomedicina, Universitat Autonoma de Barcelona

Career Start Year 1980

Number of shared co-authors 2

Tom Alber

University of California berkeley

Career Start Year 1976

Number of shared co-authors 7

Ivan Rayment

College of Agricultural and Life Sciences, University of Wisconsin-Madison

Career Start Year 1976

Number of shared co-authors 1

George N Phillips

Rice University

Career Start Year 1974

Number of shared co-authors 9

Dino Moras

Laboratory IGBMC (Institute of Genetics and of Molecular and Cellular Biology)

Career Start Year 1973

Number of shared co-authors 9

Tom L Blundell

Heartand Lung Research Institute, University of Cambridge

Career Start Year 1971

Number of shared co-authors 4

Wayne A Hendrickson

Columbia University

Career Start Year 1968

Number of shared co-authors 10

Helen M Berman

The State University of New Jersey

Career Start Year 1967

Number of shared co-authors 20

Robert M Stroud

University of California San Francisco

Career Start Year 1965

Number of shared co-authors 5

David Eisenberg

university of california los angeles

Career Start Year 1963

Number of shared co-authors 8

row(s) 1 - 30 of 30

Rosalind Kim

Lawrence Berkeley National Laboratory

Co-authored papers 80

Ursula Schulze-Gahmen

Gladstone Institute of Virology, Gladstone Institutes San Francisco CA USA .

Co-authored papers 11

Li-Wei Hung

Los Alamos National Laboratory

Co-authored papers 11

Liang Tong

Columbia University

Co-authored papers 11

Paul D Adams

Lawrence Berkeley National Laboratory

Co-authored papers 10

Joel L Sussman

Weizmann Institute of Science

Co-authored papers 7

Inna Dubchak

Lawrence Berkeley National Laboratory

Co-authored papers 7

Debanu Das

Accelero Biostructures Inc., USA XPose Therapeutics Inc.

Co-authored papers 5

John-Marc Chandonia

Lawrence Berkeley National Laboratory

Co-authored papers 5

Jasper Rine

University of California berkeley

Co-authored papers 4

Lan Huang

University of California Irvine

Co-authored papers 4

George M Church

Harvard Medical School

Co-authored papers 2

Fan Jiang

Co-authored papers 2

Steven E Brenner

University of California berkeley

Co-authored papers 2

Rong Xiao

School of Public Health, Capital Medical University

Co-authored papers 1

Mei Jiang

The University of Texas MD Anderson Cancer Center

Co-authored papers 1

Kristin C Gunsalus

Center for Genomics and Systems Biology, New York University Abu Dhabi (NYUAD)

Co-authored papers 1

Masayori Inouye

Robert Wood Johnson Medical School, Rutgers University

Co-authored papers 1

Gaetano T Montelione

Rensselaer Polytechnic Institute

Co-authored papers 1

Ritu Shastry

Co-authored papers 1

C. Dale Poulter

University of Utah

Co-authored papers 1

Opher Gileadi

Structural Genomics Consortium Karolinska Institute Stockholm Sweden.

Co-authored papers 1

Zihe Rao

Nankai University

Co-authored papers 1

Ian A Wilson

The Scripps Research Institute, USA The Skaggs Institute for Chemical Biology

Co-authored papers 1

Kellie Cunningham

Co-authored papers 1

F W Studier

Brookhaven National Laboratory

Co-authored papers 1

Thea Norman

Bill & Melinda Gates Foundation

Co-authored papers 1

P??r Nordlund

Karolinska Institutet, BioClinicum J6

Co-authored papers 1

Geoffrey S Waldo

Los Alamos National Laboratory

Co-authored papers 1

Yunyu Shi

University of Science & Technology of China

Co-authored papers 1

1 - 30

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