Author details

Full Name

Umit Topaloglu

Affiliation

Wake Forest School of Medicine

ORCID

Career Start Year

1996

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36799548	NIH HEAL Clinical Data Elements (CDE) implementation: NIH HEAL Initiative IMPOWR network IDEA-CC.	Pain Med	2023
38023147	Use of comprehensive genomic profiling for biomarker discovery for the management of non-small cell lung cancer brain metastases.	Front Oncol	2023
38057320	Sample average treatment effect on the treated (SATT) analysis using counterfactual explanation identifies BMT and SARS-CoV-2 vaccination as protective risk factors associated with COVID-19 severity and survival in patients with multiple myeloma.	Blood Cancer J	2023
38055914	Cancer Informatics for Cancer Centers: Sharing Ideas on How to Build an Artificial Intelligence-Ready Informatics Ecosystem for Radiation Oncology.	JCO Clin Cancer Inform	2023
37345039	Transfer Learning Approach to Vascular Permeability Changes in Brain Metastasis Post-Whole-Brain Radiotherapy.	Cancers (Basel)	2023
36973365	Prognostic Mutational Signatures of NSCLC Patients treated with chemotherapy, immunotherapy and chemoimmunotherapy.	NPJ Precis Oncol	2023
36773459	Modulation of oxidative phosphorylation and mitochondrial biogenesis by cigarette smoke influence the response to immune therapy in NSCLC patients.	Lung Cancer	2023
36626203	Adaptation of a Personalized Electronic Care Planning Tool for Cancer Follow-up Care: Formative Study.	JMIR Form Res	2023
36799548	NIH HEAL Clinical Data Elements (CDE) implementation: NIH HEAL Initiative IMPOWR network IDEA-CC.	Pain Med	2023
36847455	Michigan body map: connecting the NIH HEAL IMPOWR network to the HEAL ecosystem.	Pain Med	2023
38023147	Use of comprehensive genomic profiling for biomarker discovery for the management of non-small cell lung cancer brain metastases.	Front Oncol	2023
38057320	Sample average treatment effect on the treated (SATT) analysis using counterfactual explanation identifies BMT and SARS-CoV-2 vaccination as protective risk factors associated with COVID-19 severity and survival in patients with multiple myeloma.	Blood Cancer J	2023
38055914	Cancer Informatics for Cancer Centers: Sharing Ideas on How to Build an Artificial Intelligence-Ready Informatics Ecosystem for Radiation Oncology.	JCO Clin Cancer Inform	2023
37345039	Transfer Learning Approach to Vascular Permeability Changes in Brain Metastasis Post-Whole-Brain Radiotherapy.	Cancers (Basel)	2023
36973365	Prognostic Mutational Signatures of NSCLC Patients treated with chemotherapy, immunotherapy and chemoimmunotherapy.	NPJ Precis Oncol	2023
36626203	Adaptation of a Personalized Electronic Care Planning Tool for Cancer Follow-up Care: Formative Study.	JMIR Form Res	2023
36847455	Michigan body map: connecting the NIH HEAL IMPOWR network to the HEAL ecosystem.	Pain Med	2023
36773459	Modulation of oxidative phosphorylation and mitochondrial biogenesis by cigarette smoke influence the response to immune therapy in NSCLC patients.	Lung Cancer	2023
34962505	Association Between Immune Dysfunction and COVID-19 Breakthrough Infection After SARS-CoV-2 Vaccination in the US.	JAMA Intern Med	2022
36247085	Patient-reported outcomes via electronic health record portal versus telephone: a pragmatic randomized pilot trial of anxiety or depression symptoms in epilepsy.	JAMIA Open	2022
35461327	Exosomal miR-4466 from nicotine-activated neutrophils promotes tumor cell stemness and metabolism in lung cancer metastasis.	Oncogene	2022
35640977	VOC-alarm: mutation-based prediction of SARS-CoV-2 variants of concern.	Bioinformatics	2022
35854733	Applying FHIR Genomics for Research - From Sequencing to Database.	AMIA Jt Summits Transl Sci Proc	2022
36419451	A transformer-based deep-learning approach for classifying brain metastases into primary organ sites using clinical whole-brain MRI images.	Patterns (N Y)	2022
37448456	Guiding principles for technical infrastructure to support computable biomedical knowledge.	Learn Health Syst	2022
34962505	Association Between Immune Dysfunction and COVID-19 Breakthrough Infection After SARS-CoV-2 Vaccination in the US.	JAMA Intern Med	2022
35286152	Risk and Outcome of Breakthrough COVID-19 Infections in Vaccinated Patients With Cancer: Real-World Evidence From the National COVID Cohort Collaborative.	J Clin Oncol	2022
35640977	VOC-alarm: mutation-based prediction of SARS-CoV-2 variants of concern.	Bioinformatics	2022
35461327	Exosomal miR-4466 from nicotine-activated neutrophils promotes tumor cell stemness and metabolism in lung cancer metastasis.	Oncogene	2022
35854733	Applying FHIR Genomics for Research - From Sequencing to Database.	AMIA Jt Summits Transl Sci Proc	2022
37448456	Guiding principles for technical infrastructure to support computable biomedical knowledge.	Learn Health Syst	2022
36419451	A transformer-based deep-learning approach for classifying brain metastases into primary organ sites using clinical whole-brain MRI images.	Patterns (N Y)	2022
36247085	Patient-reported outcomes via electronic health record portal versus telephone: a pragmatic randomized pilot trial of anxiety or depression symptoms in epilepsy.	JAMIA Open	2022
35286152	Risk and Outcome of Breakthrough COVID-19 Infections in Vaccinated Patients With Cancer: Real-World Evidence From the National COVID Cohort Collaborative.	J Clin Oncol	2022
33411624	Cloud-Based Federated Learning Implementation Across Medical Centers.	JCO Clin Cancer Inform	2021
33791733	Challenges in defining Long COVID: Striking differences across literature, Electronic Health Records, and patient-reported information.	medRxiv	2021
34206538	Prevalence of DNA Repair Gene Mutations in Blood and Tumor Tissue and Impact on Prognosis and Treatment in HNSCC.	Cancers (Basel)	2021
34042773	Evaluating Site-Level Implementations of the HL7 FHIR Standard to Support eSource Data Exchange in Clinical Research.	Stud Health Technol Inform	2021
33989015	What Oncologists Want: Identifying Challenges and Preferences on Diagnosis Data Entry to Reduce EHR-Induced Burden and Improve Clinical Data Quality.	JCO Clin Cancer Inform	2021
33936420	Evaluating the Coverage of the HL7 <sup><i>Â®</i></sup> FHIR <sup><i>Â®</i></sup> Standard to Support eSource Data Exchange Implementations for use in Multi-Site Clinical Research Studies.	AMIA Annu Symp Proc	2021
34085538	Outcomes of COVID-19 in Patients With Cancer: Report From the National COVID Cohort Collaborative (N3C).	J Clin Oncol	2021
33098199	The Prognostic and Therapeutic Value of the Mutational Profile of Blood and Tumor Tissue in Head and Neck Squamous Cell Carcinoma.	Oncologist	2021
33411624	Cloud-Based Federated Learning Implementation Across Medical Centers.	JCO Clin Cancer Inform	2021
33107184	SMARCA4 mutations in KRAS-mutant lung adenocarcinoma: a multi-cohort analysis.	Mol Oncol	2021
34623872	Reply to K. Takada et al.	J Clin Oncol	2021
35036547	Creating learning health systems and the emerging role of biomedical informatics.	Learn Health Syst	2021
34830888	Relationship between Tumor Mutational Burden, PD-L1, Patient Characteristics, and Response to Immune Checkpoint Inhibitors in Head and Neck Squamous Cell Carcinoma.	Cancers (Basel)	2021
34693280	In the Pursuit of Privacy: The Promises and Predicaments of Federated Learning in Healthcare.	Front Artif Intell	2021
33791733	Challenges in defining Long COVID: Striking differences across literature, Electronic Health Records, and patient-reported information.	medRxiv	2021
35036547	Creating learning health systems and the emerging role of biomedical informatics.	Learn Health Syst	2021

1 - 50 of 160

Matthew R Buras

Mayo Clinic

Career Start Year 2017

Number of shared co-authors 0

Brian Tsui

David Geffen School of Medicine at university of california los angeles

Career Start Year 2016

Number of shared co-authors 0

Swathikan Chidambaram

Imperial College London

Career Start Year 2016

Number of shared co-authors 0

Eyal Klang

Sheba Medical Center

Career Start Year 2014

Number of shared co-authors 0

Matthew A Hathcock

Mayo Clinic

Career Start Year 2013

Number of shared co-authors 1

Tristan Grogan

University of California Los Angeles

Career Start Year 2013

Number of shared co-authors 1

Yue Yu

Health Sciences Mayo Clinic

Career Start Year 2012

Number of shared co-authors 2

Irbaz Bin Riaz

Mayo Clinic

Career Start Year 2012

Number of shared co-authors 0

Christopher Louden

University of Texas Health Science Center at San Antonio

Career Start Year 2011

Number of shared co-authors 1

Casey N Ta

Columbia University Irving Medical Center

Career Start Year 2011

Number of shared co-authors 3

Kun-Hsing Yu

Harvard Medical School

Career Start Year 2011

Number of shared co-authors 0

Christopher M Sauer

Amsterdam Institute for Infection and Immunity (AII), Vrije Universiteit

Career Start Year 2009

Number of shared co-authors 0

Jeremy L Warner

Vanderbilt University Medical Center

Career Start Year 2009

Number of shared co-authors 12

Sunita Ghosh

Cross Cancer Institute

Career Start Year 2006

Number of shared co-authors 0

Travis Osterman

Vanderbilt University Medical Center

Career Start Year 2004

Number of shared co-authors 1

Griffin M Weber

Harvard Medical School

Career Start Year 2001

Number of shared co-authors 9

Dexiang Gao

University of Colorado Anschutz Medical Campus

Career Start Year 2001

Number of shared co-authors 0

Rae Woong Park

Ajou University Graduate School of Medicine

Career Start Year 2000

Number of shared co-authors 1

Yi-Hsin Elsa Hsu

Taipei Medical University

Career Start Year 1999

Number of shared co-authors 0

Thomas J George

UF Health Cancer Center

Career Start Year 1998

Number of shared co-authors 4

Tina Hernandez-Boussard

Stanford University

Career Start Year 1998

Number of shared co-authors 4

David Elashoff

David Geffen School of Medicine at University of California los angeles

Career Start Year 1997

Number of shared co-authors 2

Elizabeth Garrett-Mayer

Center for Research and Analytics, American Society of Clinical Oncology

Career Start Year 1997

Number of shared co-authors 0

Guo-Qiang Zhang

China-Japan Friendship Hospital

Career Start Year 1997

Number of shared co-authors 1

Shu-Xia Li

Center for Outcomes Research and Evaluation, Yale University School of Medicine

Career Start Year 1996

Number of shared co-authors 0

Lucila Ohno-Machado

Escola de Administracao de Empresas - FGV, Stanford University, University of California San Diego, University of Sao Paulo, Yale School of Medicine

Career Start Year 1993

Number of shared co-authors 1

Yu-Chuan Jack Li

Graduate Institute of Biomedical Informatics, Taipei Medical University

Career Start Year 1993

Number of shared co-authors 0

Madhu Mazumdar

Icahn School of Medicine at Mount Sinai

Career Start Year 1992

Number of shared co-authors 1

Felicity T Enders

Mayo Clinic

Career Start Year 1985

Number of shared co-authors 0

row(s) 1 - 29 of 29

Ralph B D'Agostino

Co-authored papers 8

Lance D Miller

Co-authored papers 6

Jiang Bian

College of Medicine, University of Florida

Co-authored papers 6

William R Hogan

College of Medicine, University of Florida

Co-authored papers 4

Timothy Bergquist

University of Washington School of Medicine

Co-authored papers 4

Mengjun Xie

University of Arkansas at Little Rock

Co-authored papers 3

Benjamin Bates

Rutgers Robert Wood Johnson Medical School

Co-authored papers 3

Laura D Wandner

Co-authored papers 2

Meredith Zozus

University of Texas Health

Co-authored papers 2

Matti Nykter

Prostate Cancer Research Center, Tampere University and Tays Cancer Center

Co-authored papers 2

Reginald F Munden

Co-authored papers 2

Matvey B Palchuk

Harvard Medical School

Co-authored papers 2

Christopher G Chute

Brown University, Brown University Warren Alpert Medical School, Dartmouth-Hitchcock Medical Center, Harvard School of Public Health, Johns Hopkins Medicine, Mayo Clinic Minnesota

Co-authored papers 2

Michael Rutherford

University of Arkansas for Medical Sciences

Co-authored papers 2

Amanda J Vinson

Dalhousie University

Co-authored papers 1

David P Miller

Co-authored papers 1

Tellen D Bennett

Adult and Child Center for Outcomes Research and Delivery Science

Co-authored papers 1