Author details

Full Name

Jorg Drenkow

Affiliation

ORCID

Career Start Year

1998

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
33400914	Single-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery.	Dev Cell	2021
32759341	A limited set of transcriptional programs define major cell types.	Genome Res	2020
32296450	Management, Analyses, and Distribution of the MaizeCODE Data on the Cloud.	Front Plant Sci	2020
31645363	Dynamics of microRNA expression during mouse prenatal development.	Genome Res	2019
25582907	Enhanced transcriptome maps from multiple mouse tissues reveal evolutionary constraint in gene expression.	Nat Commun	2015
25164755	Comparative analysis of the transcriptome across distant species.	Nature	2014
25409824	A comparative encyclopedia of DNA elements in the mouse genome.	Nature	2014
23104886	STAR: ultrafast universal RNA-seq aligner.	Bioinformatics	2013
22238572	Evidence for transcript networks composed of chimeric RNAs in human cells.	PLoS One	2012
22955620	Landscape of transcription in human cells.	Nature	2012
19562714	Variation in novel exons (RACEfrags) of the MECP2 gene in Rett syndrome patients and controls.	Hum Mutat	2009
18500348	Efficient targeted transcript discovery via array-based normalization of RACE libraries.	Nat Methods	2008
17571346	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.	Nature	2007
17568003	Structured RNAs in the ENCODE selected regions of the human genome.	Genome Res	2007
17567994	Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions.	Genome Res	2007
17510325	RNA maps reveal new RNA classes and a possible function for pervasive transcription.	Science	2007
16614257	HIV regulation of the IL-7R: a viral mechanism for enhancing HIV-1 replication in human macrophages in vitro.	J Leukoc Biol	2006
17480199	Transcriptional landscape of the human and fly genomes: nonlinear and multifunctional modular model of transcriptomes.	Cold Spring Harb Symp Quant Biol	2006
15998911	Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays.	Genome Res	2005
15790807	Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution.	Science	2005
14980218	Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs.	Cell	2004
14993201	Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22.	Genome Res	2004
14517275	MyD88 primes macrophages for full-scale activation by interferon-gamma yet mediates few responses to Mycobacterium tuberculosis.	J Exp Med	2003
11988577	Large-scale transcriptional activity in chromosomes 21 and 22.	Science	2002
11282970	Comparing genomes within the species Mycobacterium tuberculosis.	Genome Res	2001
11602641	Reprogramming of the macrophage transcriptome in response to interferon-gamma and Mycobacterium tuberculosis: signaling roles of nitric oxide synthase-2 and phagocyte oxidase.	J Exp Med	2001
11435401	Temporal gene regulation during HIV-1 infection of human CD4+ T cells.	Genome Res	2001
11116098	Detection of deleted genomic DNA using a semiautomated computational analysis of GeneChip data.	Genome Res	2000
11087813	The transcriptional responses of respiratory epithelial cells to Bordetella pertussis reveal host defensive and pathogen counter-defensive strategies.	Proc Natl Acad Sci U S A	2000
9582189	Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic Mycobacterium DNA arrays.	Genome Res	1998