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Author Details

Tyler Alioto
Universitat de Barcelona (UB)
2001
54
25
PMIDPaper TitleJournal TitlePublished Year
36210755Contrasting transcriptomic patterns reveal a genomic basis for drought resilience in the relict fir Abies pinsapo Boiss.Tree Physiol2023
36210755Contrasting transcriptomic patterns reveal a genomic basis for drought resilience in the relict fir Abies pinsapo Boiss.Tree Physiol2023
37850903A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797).G3 (Bethesda)2023
38010338Development of a novel streamlined workflow (AACRE) and database (inCREDBle) for genomic analysis of carbapenem-resistant Enterobacterales.Microb Genom2023
37797305Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome.DNA Res2023
37152146<i>De novo</i> transcriptome sequencing and gene co-expression reveal a genomic basis for drought sensitivity and evidence of a rapid local adaptation on Atlas cedar (<i>Cedrus atlantica</i>).Front Plant Sci2023
36587276A chromosome-level genome assembly enables the identification of the follicule stimulating hormone receptor as the master sex-determining gene in the flatfish Solea senegalensis.Mol Ecol Resour2023
37137526Chromosome-level genome assembly of Lilford's wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain).DNA Res2023
38010338Development of a novel streamlined workflow (AACRE) and database (inCREDBle) for genomic analysis of carbapenem-resistant Enterobacterales.Microb Genom2023
37797305Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome.DNA Res2023
37850903A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797).G3 (Bethesda)2023
37152146<i>De novo</i> transcriptome sequencing and gene co-expression reveal a genomic basis for drought sensitivity and evidence of a rapid local adaptation on Atlas cedar (<i>Cedrus atlantica</i>).Front Plant Sci2023
37137526Chromosome-level genome assembly of Lilford's wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain).DNA Res2023
36587276A chromosome-level genome assembly enables the identification of the follicule stimulating hormone receptor as the master sex-determining gene in the flatfish Solea senegalensis.Mol Ecol Resour2023
34688835Emergence of 16S rRNA methyltransferases among carbapenemase-producing Enterobacterales in Spain studied by whole-genome sequencing.Int J Antimicrob Agents2022
35453217A New Variant of the <i>aadE-sat4-aphA-3</i> Gene Cluster Found in a Conjugative Plasmid from a MDR <i>Campylobacter jejuni</i> Isolate.Antibiotics (Basel)2022
35583263Chromosome-level assembly, annotation and phylome of Pelobates cultripes, the western spadefoot toad.DNA Res2022
35986060Developmental RNA-Seq transcriptomics of haploid germ cells and spermatozoa uncovers novel pathways associated with teleost spermiogenesis.Sci Rep2022
34688835Emergence of 16S rRNA methyltransferases among carbapenemase-producing Enterobacterales in Spain studied by whole-genome sequencing.Int J Antimicrob Agents2022
35216838Corrigendum to "Tetracycline resistance transmission in Campylobacter is promoted at temperatures resembling the avian reservoir" [Vet. Microbiol. (2020) 108652].Vet Microbiol2022
35583263Chromosome-level assembly, annotation and phylome of Pelobates cultripes, the western spadefoot toad.DNA Res2022
35453217A New Variant of the <i>aadE-sat4-aphA-3</i> Gene Cluster Found in a Conjugative Plasmid from a MDR <i>Campylobacter jejuni</i> Isolate.Antibiotics (Basel)2022
35986060Developmental RNA-Seq transcriptomics of haploid germ cells and spermatozoa uncovers novel pathways associated with teleost spermiogenesis.Sci Rep2022
35216838Corrigendum to "Tetracycline resistance transmission in Campylobacter is promoted at temperatures resembling the avian reservoir" [Vet. Microbiol. (2020) 108652].Vet Microbiol2022
33952594An Improved Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Data Analysis Pipeline for the Identification of Carbapenemase-Producing Klebsiella pneumoniae.J Clin Microbiol2021
33802698Combining Nanopore and Illumina Sequencing Permits Detailed Analysis of Insertion Mutations and Structural Variations Produced by PEG-Mediated Transformation in <i>Ostreococcus tauri</i>.Cells2021
33952594An Improved Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Data Analysis Pipeline for the Identification of Carbapenemase-Producing Klebsiella pneumoniae.J Clin Microbiol2021
33980650Occurrence of the <i>p019</i> Gene in the <i>bla</i><sub>KPC</sub>-Harboring Plasmids: Adverse Clinical Impact for Direct Tracking of KPC-Producing <i>Klebsiella pneumoniae</i> by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.J Clin Microbiol2021
34188074Chromosome anchoring in Senegalese sole (Solea senegalensis) reveals sex-associated markers and genome rearrangements in flatfish.Sci Rep2021
33802698Combining Nanopore and Illumina Sequencing Permits Detailed Analysis of Insertion Mutations and Structural Variations Produced by PEG-Mediated Transformation in <i>Ostreococcus tauri</i>.Cells2021
34188074Chromosome anchoring in Senegalese sole (Solea senegalensis) reveals sex-associated markers and genome rearrangements in flatfish.Sci Rep2021
33980650Occurrence of the <i>p019</i> Gene in the <i>bla</i><sub>KPC</sub>-Harboring Plasmids: Adverse Clinical Impact for Direct Tracking of KPC-Producing <i>Klebsiella pneumoniae</i> by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.J Clin Microbiol2021
31529539Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence.Plant J2020
32402330Tetracycline resistance transmission in Campylobacter is promoted at temperatures resembling the avian reservoir.Vet Microbiol2020
32457347Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings.Nat Commun2020
31702774Phylogenomics Identifies an Ancestral Burst of Gene Duplications Predating the Diversification of Aphidomorpha.Mol Biol Evol2020
33100219Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.).BMC Biol2020
33301456Alteration in the Culex pipiens transcriptome reveals diverse mechanisms of the mosquito immune system implicated upon Rift Valley fever phlebovirus exposure.PLoS Negl Trop Dis2020
33007407Linking omics and ecology to dissect interactions between the apple proliferation phytoplasma and its psyllid vector Cacopsylla melanoneura.Insect Biochem Mol Biol2020
33168033Massive gene presence-absence variation shapes an open pan-genome in the Mediterranean mussel.Genome Biol2020
31529539Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence.Plant J2020
31702774Phylogenomics Identifies an Ancestral Burst of Gene Duplications Predating the Diversification of Aphidomorpha.Mol Biol Evol2020
33168033Massive gene presence-absence variation shapes an open pan-genome in the Mediterranean mussel.Genome Biol2020
33301456Alteration in the Culex pipiens transcriptome reveals diverse mechanisms of the mosquito immune system implicated upon Rift Valley fever phlebovirus exposure.PLoS Negl Trop Dis2020
33100219Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.).BMC Biol2020
33007407Linking omics and ecology to dissect interactions between the apple proliferation phytoplasma and its psyllid vector Cacopsylla melanoneura.Insect Biochem Mol Biol2020
32402330Tetracycline resistance transmission in Campylobacter is promoted at temperatures resembling the avian reservoir.Vet Microbiol2020
32457347Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings.Nat Commun2020
30512195Epigenetic regulation of gene expression in Chinese Hamster Ovary cells in response to the changing environment of a batch culture.Biotechnol Bioeng2019
31645421The Genome Sequence of the Eastern Woodchuck (<i>Marmota monax</i>) - A Preclinical Animal Model for Chronic Hepatitis B.G3 (Bethesda)2019
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Collaborators

Universitat de Barcelona (UB)
Co-authored papers 23
Spain Universitat de Barcelona (UB)
Co-authored papers 12
Barcelona Institute of Science and Technology
Co-authored papers 11
Universitat de Barcelona (UB)
Co-authored papers 10
Catalan Institution for Research and Advanced Studies
Co-authored papers 10
Institute for Research in Biomedicine (IRB)
Co-authored papers 6
Co-authored papers 6
The James Hutton Institute
Co-authored papers 6
Co-authored papers 6
Co-authored papers 5
Co-authored papers 4
Co-authored papers 4
University of California san francisco
Co-authored papers 4
Co-authored papers 3
Co-authored papers 3
Medical University of Vienna
Co-authored papers 3
Baylor College of Medicine
Co-authored papers 3
Co-authored papers 3
Co-authored papers 3
Co-authored papers 3
Co-authored papers 3
Co-authored papers 3
Stanley Institute for Cognitive Genomics
Co-authored papers 3
Co-authored papers 3
Spanish National Bioinformatics Institute (INB/ELIXIR-ES)
Co-authored papers 3
Yale University
Co-authored papers 2
Instituto Universitario de Oncologia, Universidad de Oviedo
Co-authored papers 2
Co-authored papers 2
University of Washington
Co-authored papers 2
Barcelona Institute of Science and Technology (BIST)
Co-authored papers 2