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Author Details

Vladimir Vacic
Stanley Institute for Cognitive Genomics
2005
41
29
PMIDPaper TitleJournal TitlePublished Year
36732511Author Correction: Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism.Nat Commun2023
33748968Advancing drug discovery using the power of the human genome.J Pathol2021
33888516Genome-wide analysis of 944 133 individuals provides insights into the etiology of haemorrhoidal disease.Gut2021
31023376Sequencing and curation strategies for identifying candidate glioblastoma treatments.BMC Med Genomics2019
31375115Correction to: Sequencing and curation strategies for identifying candidate glioblastoma treatments.BMC Med Genomics2019
30804565Genome-wide analysis of insomnia in 1,331,010 individuals identifies new risk loci and functional pathways.Nat Genet2019
29563502Placenta and appetite genes GDF15 and IGFBP7 are associated with hyperemesis gravidarum.Nat Commun2018
30271907Genome-wide somatic variant calling using localized colored de Bruijn graphs.Commun Biol2018
28740869Comparing sequencing assays and human-machine analyses in actionable genomics for glioblastoma.Neurol Genet2017
27260402Differential burden of rare protein truncating variants in Alzheimer's disease patients compared to centenarians.Hum Mol Genet2016
26666262Integrative genetic analysis of mouse and human AML identifies cooperating disease alleles.J Exp Med2016
27854363Indel variant analysis of short-read sequencing data with Scalpel.Nat Protoc2016
27646943Genetic Determinants of Cisplatin Resistance in Patients With Advanced Germ Cell Tumors.J Clin Oncol2016
27354699Conpair: concordance and contamination estimator for matched tumor-normal pairs.Bioinformatics2016
26198764Genome-wide association study of schizophrenia in Ashkenazi Jews.Am J Med Genet B Neuropsychiatr Genet2015
26391891The Influence of Microdeletions and Microduplications of 16p11.2 on Global Transcription Profiles.J Child Neurol2015
26181256Whole-Exome Sequencing of Metastatic Cancer and Biomarkers of Treatment Response.JAMA Oncol2015
24722188Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism.Nat Commun2014
25333069Disease variants in genomes of 44 centenarians.Mol Genet Genomic Med2014
25164765Comparative sequencing analysis reveals high genomic concordance between matched primary and metastatic colorectal cancer lesions.Genome Biol2014
24842889Genome-wide mapping of IBD segments in an Ashkenazi PD cohort identifies associated haplotypes.Hum Mol Genet2014
24578576Detection of a recurrent DNAJB1-PRKACA chimeric transcript in fibrolamellar hepatocellular carcinoma.Science2014
23267057The variance of identity-by-descent sharing in the Wright-Fisher model.Genetics2013
22080206Disease mutations in disordered regions--exception to the rule?Mol Biosyst2012
23055912Disease-associated mutations disrupt functionally important regions of intrinsic protein disorder.PLoS Comput Biol2012
21346763Duplications of the neuropeptide receptor gene VIPR2 confer significant risk for schizophrenia.Nature2011
22196331High frequencies of de novo CNVs in bipolar disorder and schizophrenia.Neuron2011
19722269Identification, analysis, and prediction of protein ubiquitination sites.Proteins2010
20078397Graphlet kernels for prediction of functional residues in protein structures.J Comput Biol2010
19915147Immune profile and mitotic index of metastatic melanoma lesions enhance clinical staging in predicting patient survival.Proc Natl Acad Sci U S A2009
19855392Microduplications of 16p11.2 are associated with schizophrenia.Nat Genet2009
18194570Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis.BMC Mol Biol2008
18831774The unfoldomics decade: an update on intrinsically disordered proteins.BMC Genomics2008
18229677A probabilistic method for small RNA flowgram matching.Pac Symp Biocomput2008
17145717DisProt: the Database of Disordered Proteins.Nucleic Acids Res2007
17990975MSOAR: a high-throughput ortholog assignment system based on genome rearrangement.J Comput Biol2007
17578581Composition Profiler: a tool for discovery and visualization of amino acid composition differences.BMC Bioinformatics2007
17488107Characterization of molecular recognition features, MoRFs, and their binding partners.J Proteome Res2007
16632492Two Sample Logo: a graphical representation of the differences between two sets of sequence alignments.Bioinformatics2006
16935303Analysis of molecular recognition features (MoRFs).J Mol Biol2006
15310560DisProt: a database of protein disorder.Bioinformatics2005
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Collaborators

Anne-Katrin Emde
Variant Bio Inc.
Co-authored papers 8
Kanika Arora
Co-authored papers 8
Vladimir N Uversky
Morsani College of Medicine, University of South Florida
Co-authored papers 6
Predrag Radivojac
Indiana University
Co-authored papers 6
Alan Keith Dunker
Center for Computational Biology, Indiana University School of Medicine
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Michael C Zody
Broad Institute of Harvard and MIT
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Dheeraj Malhotra
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Jonathan Sebat
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Co-authored papers 6
Robert B Darnell
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Nicolas Robine
Sloan-Kettering Institute
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Dayna M Oschwald
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Michael Gill
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Nir Barzilai
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Shane McCarthy
Wellcome Sanger Institute
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Gil Atzmon
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Cecilia Esteves
Harvard Medical School
Co-authored papers 2
John R Kelsoe
University of California
Co-authored papers 2
Michael F Berger
Co-authored papers 2
John A Boockvar
Lenox Hill Hospital
Co-authored papers 2
Alexis Demopoulos
Co-authored papers 2
Markus M N??then
Institute of Human Genetics, University Hospital Bonn
Co-authored papers 2
Release 1.2