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Author Details

Lucy J Colwell
Google Research
2009
37
22
Gloria M Sheynkman (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36350672InterPro in 2022.Nucleic Acids Res2023
36350672InterPro in 2022.Nucleic Acids Res2023
36705898Nucleic Acid Structure Prediction Including Pseudoknots Through Direct Enumeration of States: A User's Guide to the LandscapeFold Algorithm.Methods Mol Biol2023
36702894Hallucinating functional protein sequences.Nat Biotechnol2023
36477304MGnify: the microbiome sequence data analysis resource in 2023.Nucleic Acids Res2023
36847334ProteInfer, deep neural networks for protein functional inference.Elife2023
36477304MGnify: the microbiome sequence data analysis resource in 2023.Nucleic Acids Res2023
36847334ProteInfer, deep neural networks for protein functional inference.Elife2023
36705898Nucleic Acid Structure Prediction Including Pseudoknots Through Direct Enumeration of States: A User's Guide to the LandscapeFold Algorithm.Methods Mol Biol2023
36702894Hallucinating functional protein sequences.Nat Biotechnol2023
35190689Using deep learning to annotate the protein universe.Nat Biotechnol2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
35859421Using sequence data to predict the self-assembly of supramolecular collagen structures.Biophys J2022
35190689Using deep learning to annotate the protein universe.Nat Biotechnol2022
35859421Using sequence data to predict the self-assembly of supramolecular collagen structures.Biophys J2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
34793698Minding the gaps: The importance of navigating holes in protein fitness landscapes.Cell Syst2021
33574611Deep diversification of an AAV capsid protein by machine learning.Nat Biotechnol2021
34793698Minding the gaps: The importance of navigating holes in protein fitness landscapes.Cell Syst2021
33574611Deep diversification of an AAV capsid protein by machine learning.Nat Biotechnol2021
31626279Computational approaches to therapeutic antibody design: established methods and emerging trends.Brief Bioinform2020
31626279Computational approaches to therapeutic antibody design: established methods and emerging trends.Brief Bioinform2020
31825609The Effect of Debiasing Protein-Ligand Binding Data on Generalization.J Chem Inf Model2020
31874057Critiquing Protein Family Classification Models Using Sufficient Input Subsets.J Comput Biol2020
32284585Rapid discovery and evolution of orthogonal aminoacyl-tRNA synthetase-tRNA pairs.Nat Biotechnol2020
32099005Glycation changes molecular organization and charge distribution in type I collagen fibrils.Sci Rep2020
31874057Critiquing Protein Family Classification Models Using Sufficient Input Subsets.J Comput Biol2020
32099005Glycation changes molecular organization and charge distribution in type I collagen fibrils.Sci Rep2020
31825609The Effect of Debiasing Protein-Ligand Binding Data on Generalization.J Chem Inf Model2020
32284585Rapid discovery and evolution of orthogonal aminoacyl-tRNA synthetase-tRNA pairs.Nat Biotechnol2020
31127041Using attribution to decode binding mechanism in neural network models for chemistry.Proc Natl Acad Sci U S A2019
31868483Collagen-Inspired Self-Assembly of Twisted Filaments.Phys Rev Lett2019
31127041Using attribution to decode binding mechanism in neural network models for chemistry.Proc Natl Acad Sci U S A2019
31353036A Polymer Physics Framework for the Entropy of Arbitrary Pseudoknots.Biophys J2019
31868483Collagen-Inspired Self-Assembly of Twisted Filaments.Phys Rev Lett2019
31353036A Polymer Physics Framework for the Entropy of Arbitrary Pseudoknots.Biophys J2019
29311320Power law tails in phylogenetic systems.Proc Natl Acad Sci U S A2018
30218106Proline provides site-specific flexibility for in vivo collagen.Sci Rep2018
30053276Analysis of nanobody paratopes reveals greater diversity than classical antibodies.Protein Eng Des Sel2018
29311320Power law tails in phylogenetic systems.Proc Natl Acad Sci U S A2018
29569425Comparative analysis of nanobody sequence and structure data.Proteins2018
29452923Statistical and machine learning approaches to predicting protein-ligand interactions.Curr Opin Struct Biol2018
30218106Proline provides site-specific flexibility for in vivo collagen.Sci Rep2018
30053276Analysis of nanobody paratopes reveals greater diversity than classical antibodies.Protein Eng Des Sel2018
29569425Comparative analysis of nanobody sequence and structure data.Proteins2018
29452923Statistical and machine learning approaches to predicting protein-ligand interactions.Curr Opin Struct Biol2018
29219382Optimal Design of Experiments by Combining Coarse and Fine Measurements.Phys Rev Lett2017
29219382Optimal Design of Experiments by Combining Coarse and Fine Measurements.Phys Rev Lett2017
27856761Predicting protein-ligand affinity with a random matrix framework.Proc Natl Acad Sci U S A2016
27856761Predicting protein-ligand affinity with a random matrix framework.Proc Natl Acad Sci U S A2016
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Collaborators

Maxwell L Bileschi
Co-authored papers 5
Alex Bateman
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 3
Debora S Marks
Blavatnik Institute, Harvard Medical School
Co-authored papers 2
Sarah A Teichmann
Wellcome Sanger Institute
Co-authored papers 2
Christine Orengo
University College London, Institute of Structural and Molecular Biology
Co-authored papers 2
Darren A Natale
Georgetown University Medical Center
Co-authored papers 2
Tina Perica
University of California, USA Quantitative Biosciences Institute san francisco
Co-authored papers 2
Paul D Thomas
University of Southern California
Co-authored papers 2
Aron Marchler-Bauer
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 2
Chris Sander
Broad Institute of MIT and Harvard
Co-authored papers 2
Alan Bridge
carnegie mellon university
Co-authored papers 2
Mark Gorelik
University of Florida
Co-authored papers 1
Maria J Martin
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 1
Shriya Raj
Co-authored papers 1
Christian J A Sigrist
Co-authored papers 1
Narmada Thanki
Co-authored papers 1
Lorna Richardson
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 1
Antoine Danchin
University of Hong Kong
Co-authored papers 1
Paul Monaghan
University of Florida
Co-authored papers 1
Ana Conesa
Institute for Integrative Systems Biology, Spanish National Research Council (CSIC)
Co-authored papers 1
Erica Watson Carter
University of Florida Citrus Research and Education Center
Co-authored papers 1
Matthias Blum
Co-authored papers 1
Cathy H Wu
Georgetown University Medical Center
Co-authored papers 1
Burkhard Rost
Technical University of Munich (TUM)
Co-authored papers 1
David Vallenet
Institut Francois Jacob, CNRS, Universite d'Evry, Universite Paris-Saclay
Co-authored papers 1
Shamil R Sunyaev
Harvard Medical School
Co-authored papers 1
Catherine Rivoire
carnegie mellon university
Co-authored papers 1
Richard J Roberts
Co-authored papers 1
Kimmen Sj??lander
University of California berkeley
Co-authored papers 1
Liudmyla Kondratova
Genetics Institute, University of Florida
Co-authored papers 1
Release 1.2