Author details

Full Name

Kara Dolinski

Affiliation

Lewis-Sigler Institute for Integrative Genomics, Princeton University

ORCID

Career Start Year

1994

Papers

H Index

Expertise

CM4AI Collaborator

Trey Ideker (CM4AI)

PMID	Paper Title	Journal Title	Published Year
37235661	Global analysis of the yeast knockout phenome.	Sci Adv	2023
37703883	Atlas of primary cell-type-specific sequence models of gene expression and variant effects.	Cell Rep Methods	2023
37235661	Global analysis of the yeast knockout phenome.	Sci Adv	2023
37703883	Atlas of primary cell-type-specific sequence models of gene expression and variant effects.	Cell Rep Methods	2023
36197453	Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII.	Database (Oxford)	2022
36197453	Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII.	Database (Oxford)	2022
33070389	The BioGRID database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions.	Protein Sci	2021
33070389	The BioGRID database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions.	Protein Sci	2021
30685436	A Computational Framework for Genome-wide Characterization of the Human Disease Landscape.	Cell Syst	2019
30476227	The BioGRID interaction database: 2019 update.	Nucleic Acids Res	2019
30685436	A Computational Framework for Genome-wide Characterization of the Human Disease Landscape.	Cell Syst	2019
30679268	Proteome-wide, Structure-Based Prediction of Protein-Protein Interactions/New Molecular Interactions Viewer.	Plant Physiol	2019
30679268	Proteome-wide, Structure-Based Prediction of Protein-Protein Interactions/New Molecular Interactions Viewer.	Plant Physiol	2019
30476227	The BioGRID interaction database: 2019 update.	Nucleic Acids Res	2019
27980099	The BioGRID interaction database: 2017 update.	Nucleic Acids Res	2017
28077563	The BioC-BioGRID corpus: full text articles annotated for curation of protein-protein and genetic interactions.	Database (Oxford)	2017
27980099	The BioGRID interaction database: 2017 update.	Nucleic Acids Res	2017
28077563	The BioC-BioGRID corpus: full text articles annotated for curation of protein-protein and genetic interactions.	Database (Oxford)	2017
26729909	Use of the BioGRID Database for Analysis of Yeast Protein and Genetic Interactions.	Cold Spring Harb Protoc	2016
26975778	An extended set of yeast-based functional assays accurately identifies human disease mutations.	Genome Res	2016
26729913	BioGRID: A Resource for Studying Biological Interactions in Yeast.	Cold Spring Harb Protoc	2016
26729909	Use of the BioGRID Database for Analysis of Yeast Protein and Genetic Interactions.	Cold Spring Harb Protoc	2016
27589962	BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.	Database (Oxford)	2016
27589962	BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.	Database (Oxford)	2016
26975778	An extended set of yeast-based functional assays accurately identifies human disease mutations.	Genome Res	2016
26729913	BioGRID: A Resource for Studying Biological Interactions in Yeast.	Cold Spring Harb Protoc	2016
25428363	The BioGRID interaction database: 2015 update.	Nucleic Acids Res	2015
25915600	Understanding multicellular function and disease with human tissue-specific networks.	Nat Genet	2015
25428363	The BioGRID interaction database: 2015 update.	Nucleic Acids Res	2015
26174066	Implications of Big Data for cell biology.	Mol Biol Cell	2015
26174066	Implications of Big Data for cell biology.	Mol Biol Cell	2015
25915600	Understanding multicellular function and disease with human tissue-specific networks.	Nat Genet	2015
23302932	Automating the construction of gene ontologies.	Nat Biotechnol	2013
23674503	The PhosphoGRID Saccharomyces cerevisiae protein phosphorylation site database: version 2.0 update.	Database (Oxford)	2013
23587305	Systematic curation of protein and genetic interaction data for computable biology.	BMC Biol	2013
23302932	Automating the construction of gene ontologies.	Nat Biotechnol	2013
23203989	The BioGRID interaction database: 2013 update.	Nucleic Acids Res	2013
23674503	The PhosphoGRID Saccharomyces cerevisiae protein phosphorylation site database: version 2.0 update.	Database (Oxford)	2013
23587305	Systematic curation of protein and genetic interaction data for computable biology.	BMC Biol	2013
23203989	The BioGRID interaction database: 2013 update.	Nucleic Acids Res	2013
23270647	A yeast phenomic model for the gene interaction network modulating CFTR-Î¿F508 protein biogenesis.	Genome Med	2012
23270647	A yeast phenomic model for the gene interaction network modulating CFTR-Î¿F508 protein biogenesis.	Genome Med	2012
21071413	The BioGRID Interaction Database: 2011 update.	Nucleic Acids Res	2011
21071413	The BioGRID Interaction Database: 2011 update.	Nucleic Acids Res	2011
21400696	Inferring protein function from homology using the Princeton Protein Orthology Database (P-POD).	Curr Protoc Bioinformatics	2011
21400696	Inferring protein function from homology using the Princeton Protein Orthology Database (P-POD).	Curr Protoc Bioinformatics	2011
19906697	Saccharomyces Genome Database provides mutant phenotype data.	Nucleic Acids Res	2010
19906697	Saccharomyces Genome Database provides mutant phenotype data.	Nucleic Acids Res	2010
19935838	Recurated protein interaction datasets.	Nat Methods	2009
19935838	Recurated protein interaction datasets.	Nat Methods	2009

1 - 50 of 120

Daniel Burnside

Ottawa Institute of Systems Biology, University of Ottawa, Carleton University

Career Start Year 2013

Number of shared co-authors 0

John Harry Caufield

American Heart Association, American Society for Microbiology, International Society for Computational Biology, Lawrence Berkeley National Laboratory, University of California Los Angeles, University of Delaware, Virginia Commonwealth University

Career Start Year 2012

Number of shared co-authors 2

Kalpana Karra

Stanford University

Career Start Year 2010

Number of shared co-authors 41

James Vlasblom

University of Regina

Career Start Year 2006

Number of shared co-authors 3

Matthew Jessulat

University of Regina

Career Start Year 2006

Number of shared co-authors 1

Mohan Babu

University of Regina

Career Start Year 2004

Number of shared co-authors 4

Michael Riffle

University of Washington

Career Start Year 2003

Number of shared co-authors 1

Vera van Noort

Leiden University, Institute of Biology Leiden

Career Start Year 2003

Number of shared co-authors 0

Patrick Kemmeren

Princess Maxima Center for Pediatric Oncology

Career Start Year 2002

Number of shared co-authors 0

Yunchen Gong

University of Toronto

Career Start Year 2000

Number of shared co-authors 0

Gerard Cagney

Conway Institute of Biomedical and Biomolecular Sciences, University College Dublin

Career Start Year 2000

Number of shared co-authors 5

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 11

Alan Bridge

carnegie mellon university

Career Start Year 1998

Number of shared co-authors 48

Nevan J Krogan (CM4AI)

University of California San Francisco

Career Start Year 1998

Number of shared co-authors 13

Ashkan Golshani

Ottawa Institute of Systems Biology, Carleton University

Career Start Year 1997

Number of shared co-authors 2

Patrice Menard

Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark

Career Start Year 1996

Number of shared co-authors 7

Christopher T Workman

Technical University of Denmark

Career Start Year 1995

Number of shared co-authors 3

Peter Uetz

Center for the Study of Biological Complexity, Virginia Commonwealth University

Career Start Year 1994

Number of shared co-authors 13

Ioannis Xenarios

University of Lausanne

Career Start Year 1994

Number of shared co-authors 47

Marc Feuermann

carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4

Career Start Year 1994

Number of shared co-authors 43

Edward M Marcotte

University of Texas

Career Start Year 1993

Number of shared co-authors 12

Bianca Habermann

Aix Marseille University, CNRS, Turing Center for Living Systems

Career Start Year 1993

Number of shared co-authors 2

Marc R Wilkins

University of New South Wales

Career Start Year 1992

Number of shared co-authors 2

Paul D Thomas

University of Southern California

Career Start Year 1991

Number of shared co-authors 49

Alfonso Valencia

Josep Carreras Leukaemia Research Institute (IJC)

Career Start Year 1986

Number of shared co-authors 30

Stanley Fields

University of Washington

Career Start Year 1985

Number of shared co-authors 11

Darren A Natale

Georgetown University Medical Center

Career Start Year 1982

Number of shared co-authors 15

Michael Snyder

Stanford University

Career Start Year 1981

Number of shared co-authors 28

Chris Sander

Broad Institute of MIT and Harvard

Career Start Year 1979

Number of shared co-authors 16

Stephen G Oliver

University of Cambridge

Career Start Year 1976

Number of shared co-authors 43

row(s) 1 - 30 of 30

David Botstein

Calico Life Sciences LLC

Co-authored papers 28

Rose Oughtred

Lewis-Sigler Institute for Integrative Genomics, Princeton University

Co-authored papers 26

Selina S Dwight

Stanford University School of Medicine

Co-authored papers 17

Mike Tyers

Institute for Research in Immunology and Cancer (IRIC), Universite de Montreal

Co-authored papers 17

J Michael Cherry

Stanford University

Co-authored papers 17

Chandra L Theesfeld

Lewis-Sigler Institute for Integrative Genomics, Princeton University

Co-authored papers 15

Shuai Weng

Stanford University

Co-authored papers 14

Andrew Chatr-Aryamontri

Institute for Research in Immunology and Cancer (IRIC), University of Montreal

Co-authored papers 13

Dianna G Fisk

Stanford Medicine Clinical Genomics Program

Co-authored papers 12

Jennifer Rust

Co-authored papers 12

Gail Binkley

Stanford University

Co-authored papers 12

Jodi E Hirschman

Broad Institute of MIT and Harvard

Co-authored papers 12

Mark Schroeder

Co-authored papers 11

Christie S Chang

Co-authored papers 11

Chris Stark

The Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital

Co-authored papers 11

Bobby-Joe Breitkreutz

The Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital

Co-authored papers 11

Lorrie Boucher

The Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital

Co-authored papers 11

Karen R Christie

Stanford University Medical School

Co-authored papers 11

Anand Sethuraman

Stanford University School of Medicine

Co-authored papers 10

Stacia R Engel

Stanford University

Co-authored papers 10

Eurie L Hong

Stanford University School of Medicine

Co-authored papers 10

Rama Balakrishnan

Genentech Inc.

Co-authored papers 10

Catherine A Ball

Co-authored papers 9

Midori A Harris

University of Cambridge

Co-authored papers 9

Maria C Costanzo

The Broad Institute of Harvard and MIT

Co-authored papers 9

Robert S Nash

Stanford University

Co-authored papers 8

Teresa Reguly

Samuel Lunenfeld Research Institute, Mount Sinai Hospital

Co-authored papers 7

Olga G Troyanskaya

Lewis-Sigler Institute for Integrative Genomics, Princeton University

Co-authored papers 6

Ashton Breitkreutz

Samuel Lunenfeld Research Institute, Mount Sinai Hospital

Co-authored papers 6

Andrew Winter

University of Edinburgh

Co-authored papers 6

1 - 30

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