Author details

Full Name

Johan Trygg

Affiliation

ORCID

Career Start Year

2004

Papers

123

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37641350	Near-infrared hyperspectral image analysis for monitoring the cheese-ripening process.		2023
38015079	Feasibility and performance of cross-clone Raman calibration models in CHO cultivation.		2023
34731954	Towards better process management in wastewater treatment plants: Process analytics based on SHAP values for tree-based machine learning methods.	Journal of Environmental Management	2022
35397189	Perinatal risk factors for mortality in very preterm infants-A nationwide, population-based discriminant analysis.	Acta Paediatrica, International Journal of Paediatrics	2022
35532162	Serine Protease Inhibitors Restrict Host Susceptibility to SARS-CoV-2 Infections.	mBio	2022
35947255	BoT-Net: a lightweight bag of tricks-based neural network for efficient LncRNA-miRNA interaction prediction.	Interdisciplinary Sciences - Computational Life Sciences	2022
36072286	Model-based intensification of CHO cell cultures: One-step strategy from fed-batch to perfusion.	Frontiers in Bioengineering and Biotechnology	2022
36266999	Hierarchical time-series analysis of dynamic bioprocess systems.	Biotechnology Journal	2022
35983235	EL-RMLocNet: An explainable LSTM network for RNA-associated multi-compartment localization prediction.	Comput Struct Biotechnol J	2022
34462594	LIVECell-A large-scale dataset for label-free live cell segmentation.	Nature Methods	2021
33812384	Multiblock variable influence on orthogonal projections (MB-VIOP) for enhanced interpretation of total, global, local and unique variations in OnPLS models.	BMC Bioinformatics	2021
33593413	Overexpression of vesicle-associated membrane protein PttVAP27-17 as a tool to improve biomass production and the overall saccharification yields in Populus trees.	Biotechnology for Biofuels	2021
33874798	A Machine Vision Approach for Bioreactor Foam Sensing.	SLAS Technology	2021
34088065	A machine learning framework to improve effluent quality control in wastewater treatment plants.	Science of the Total Environment	2021
34321638	Statistical analysis in metabolic phenotyping.		2021
32617943	Analysis of Plant Cell Walls Using High-Throughput Profiling Techniques with Multivariate Methods.	Methods in Molecular Biology	2020
33316943	MirLocPredictor: A ConvNet-Based Multi-Label MicroRNA Subcellular Localization Predictor by Incorporating k-Mer Positional Information.	Genes (Basel)	2020
32709053	Application of Multiblock Analysis on Small Metabolomic Multi-Tissue Dataset.	Metabolites	2020
32915809	A whole-genome sequenced control population in northern Sweden reveals subregional genetic differences.	PLoS ONE	2020
32679889	Overexpression of VviPGIP1 and NtCAD14 in Tobacco Screened Using Glycan Microarrays Reveals Cell Wall Reorganisation in the Absence of Fungal Infection.	Vaccines	2020
31548564	Ultrasound imaging of dorsal neck muscles with speckle tracking analyses - the relationship between muscle deformation and force.	Scientific Reports	2019
31615395	doepipeline: a systematic approach to optimizing multi-level and multi-step data processing workflows.	BMC Bioinformatics	2019
31086370	Metabolic profiling of zebrafish embryo development from blastula period to early larval stages.	PLoS ONE	2019
30758178	Joint and Unique Multiblock Analysis for Integration and Calibration Transfer of NIR Instruments.	Analytical Chemistry	2019
30917156	A geographically matched control population efficiently limits the number of candidate disease-causing variants in an unbiased whole-genome analysis.	PLoS One	2019
30742448	Cytokine Profiles in Autoantibody Defined Subgroups of Systemic Lupus Erythematosus.	Journal of Proteome Research	2019
31120463	Joint and unique multiblock analysis of biological data - multiomics malaria study.	Faraday Discussions	2019
31373341	Data mining and visualisation: general discussion.	Faraday Discuss	2019
29298676	A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation ofâ¿¿ â¿¿â¿¿Populusâ¿¿â¿¿ â¿¿trees.	BMC Genomics	2018
29016400	Alterations in the Mechanical Response of Deep Dorsal Neck Muscles in Individuals Experiencing Whiplash-Associated Disorders Compared to Healthy Controls: An Ultrasound Study.	American Journal of Physical Medicine and Rehabilitation	2018
29873499	Metabolic Profiling of Multiorgan Samples: Evaluation of MODY5/RCAD Mutant Mice.	Journal of Proteome Research	2018
30007791	Quantification of run order effect on chromatography - mass spectrometry profiling data.	Journal of Chromatography A	2018
29868176	Kynurenine pathway is altered in patients with SLE and associated with severe fatigue.	Lupus Science and Medicine	2018
30335973	OnPLS-Based Multi-Block Data Integration: A Multivariate Approach to Interrogating Biological Interactions in Asthma.	Analytical Chemistry	2018
29941911	Neck-specific exercise improves impaired interactions between ventral neck muscles in chronic whiplash: A randomized controlled ultrasound study.	Scientific Reports	2018
28134039	Dysregulations in circulating sphingolipids associate with disease activity indices in female patients with systemic lupus erythematosus: a cross-sectional study.	Lupus	2017
28642480	Haralick texture features from apparent diffusion coefficient (ADC) MRI images depend on imaging and pre-processing parameters.	Scientific Reports	2017
28633298	Protein expression in tension wood formation monitored at high tissue resolution in Populus.	Journal of Experimental Botany	2017
28497952	Generalized Subset Designs in Analytical Chemistry.	Analytical Chemistry	2017
28890672	Multivariate strategy for the sample selection and integration of multi-batch data in metabolomics.	Metabolomics	2017
28886714	The oxylipin and endocannabidome responses in acute phase Plasmodium falciparum malaria in children.	Malaria Journal	2017
28837046	Association between pathology and texture features of multi parametric MRI of the prostate.	Physics in Medicine and Biology	2017
28473743	The effects of thawing on the plasma metabolome: evaluating differences between thawed plasma and multi-organ samples.	Metabolomics	2017
28286460	Lipid response patterns in acute phase paediatric malaria.	Metabolomics	2017
27755546	Metabolite and Lipid Profiling of Biobank Plasma Samples Collected Prior to Onset of Rheumatoid Arthritis.	PLoS ONE	2016
27441838	Metabolic Profiling of Systemic Lupus Erythematosus and Comparison with Primary SjÃ¶gren's Syndrome and Systemic Sclerosis.	PLoS ONE	2016
27113461	Multi-platform metabolomics assays for human lung lavage fluids in an air pollution exposure study.	Analytical and Bioanalytical Chemistry	2016
26887814	Quantitative proteomics reveals protein profiles underlying major transitions in aspen wood development.	BMC Genomics	2016
26803313	Metabolomics study of fatigue in patients with rheumatoid arthritis naÃ¯ve to biological treatment.	Rheumatology International	2016
27337563	Chemometric Analysis of Bacterial Peptidoglycan Reveals Atypical Modifications That Empower the Cell Wall against Predatory Enzymes and Fly Innate Immunity.	J Am Chem Soc	2016