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Author Details

Stephenie D Prokopec
University Health Network
2011
42
16
PMIDPaper TitleJournal TitlePublished Year
37874259Early Cancer Detection in Li-Fraumeni Syndrome with Cell-Free DNA.Cancer Discov2024
35317874Establishment of four head and neck squamous cell carcinoma cell lines: importance of reference DNA for accurate genomic characterisation.J Laryngol Otol2023
37481477Germline whole genome sequencing in adults with multiple primary tumors.Fam Cancer2023
37778229Loss of LRP1B expression drives acquired chemo and radio-resistance in HPV-positive head and neck cancer.Oral Oncol2023
37327320Identifying Mechanisms of Resistance by Circulating Tumor DNA in EVOLVE, a Phase II Trial of Cediranib Plus Olaparib for Ovarian Cancer at Time of PARP Inhibitor Progression.Clin Cancer Res2023
36833203Molecular Genetic Characteristics of <i>FANCI</i>, a Proposed New Ovarian Cancer Predisposing Gene.Genes (Basel)2023
36860651Integrated, Longitudinal Analysis of Cell-free DNA in Uveal Melanoma.Cancer Res Commun2023
34175923Serological abnormalities that predict progression to systemic autoimmune rheumatic diseases in antinuclear antibody-positive individuals.Rheumatology (Oxford)2022
35896551Author Correction: Whole-genome profiling of nasopharyngeal carcinoma reveals viral-host co-operation in inflammatory NF-κB activation and immune escape.Nat Commun2022
34234122Whole-genome profiling of nasopharyngeal carcinoma reveals viral-host co-operation in inflammatory NF-κB activation and immune escape.Nat Commun2021
32146388Sex disparities in head &amp; neck cancer driver genes: An analysis of the TCGA dataset.Oral Oncol2020
32970704Flavopiridol causes cell cycle inhibition and demonstrates anti-cancer activity in anaplastic thyroid cancer models.PLoS One2020
32277265Transgenerational epigenetic and transcriptomic effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin exposure in rat.Arch Toxicol2020
30665349BPG: Seamless, automated and interactive visualization of scientific data.BMC Bioinformatics2019
31844556Genomic and human papillomavirus profiling of an oral cancer cohort identifies TP53 as a predictor of overall survival.Cancers Head Neck2019
313866712,3,7,8-Tetrachlorodibenzo-p-dioxin modifies alternative splicing in mouse liver.PLoS One2019
31547518Rethinking Lupus Nephritis Classification on a Molecular Level.J Clin Med2019
31511937Comparative toxicoproteogenomics of mouse and rat liver identifies TCDD-resistance genes.Arch Toxicol2019
30893768Transcriptomic Impact of IMA-08401, a Novel AHR Agonist Resembling Laquinimod, on Rat Liver.Int J Mol Sci2019
30883722A readout of metabolic efficiency in arylamine N-acetyltransferase-deficient mice reveals minor energy metabolism changes.FEBS Lett2019
30626742Mutational analysis of head and neck squamous cell carcinoma stratified by smoking status.JCI Insight2019
29742110Identification of a neutrophil-related gene expression signature that is enriched in adult systemic lupus erythematosus patients with active nephritis: Clinical/pathologic associations and etiologic mechanisms.PLoS One2018
30419054Lestaurtinib is a potent inhibitor of anaplastic thyroid cancer cell line models.PLoS One2018
271368982,3,7,8 Tetrachlorodibenzo-p-dioxin-induced RNA abundance changes identify Ackr3, Col18a1, Cyb5a and Glud1 as candidate mediators of toxicity.Arch Toxicol2017
28086803Compendium of TCDD-mediated transcriptomic response datasets in mammalian model systems.BMC Genomics2017
28068672Genomic hallmarks of localized, non-indolent prostate cancer.Nature2017
27716034VennDiagramWeb: a web application for the generation of highly customizable Venn and Euler diagrams.BMC Bioinformatics2016
27716443A discrete cluster of urinary biomarkers discriminates between active systemic lupus erythematosus patients with and without glomerulonephritis.Arthritis Res Ther2016
25193804Anti-nucleosome antibodies outperform traditional biomarkers as longitudinal indicators of disease activity in systemic lupus erythematosus.Rheumatology (Oxford)2015
26290441Male and female mice show significant differences in hepatic transcriptomic response to 2,3,7,8-tetrachlorodibenzo-p-dioxin.BMC Genomics2015
26232522Transcriptional profiling of rat white adipose tissue response to 2,3,7,8-tetrachlorodibenzo-ρ-dioxin.Toxicol Appl Pharmacol2015
26005866Spatial genomic heterogeneity within localized, multifocal prostate cancer.Nat Genet2015
25703434Sex-related differences in murine hepatic transcriptional and proteomic responses to TCDD.Toxicol Appl Pharmacol2015
25529477Transcriptional profiling of rat hypothalamus response to 2,3,7,8-tetrachlorodibenzo-ρ-dioxin.Toxicology2015
24355419TCDD dysregulation of 13 AHR-target genes in rat liver.Toxicol Appl Pharmacol2014
25467400Cross-species transcriptomic analysis elucidates constitutive aryl hydrocarbon receptor activity.BMC Genomics2014
25329058Identification of reference proteins for Western blot analyses in mouse model systems of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) toxicity.PLoS One2014
23169800Systematic evaluation of medium-throughput mRNA abundance platforms.RNA2013
23791969Validating reference genes within a mouse model system of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) toxicity.Chem Biol Interact2013
23760288Long-term hemodynamic and molecular effects persist after discontinued renin-angiotensin system blockade in patients with type 1 diabetes mellitus.Kidney Int2013
22342509Inter-strain heterogeneity in rat hepatic transcriptomic responses to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD).Toxicol Appl Pharmacol2012
21215274Hepatic transcriptomic responses to TCDD in dioxin-sensitive and dioxin-resistant rats during the onset of toxicity.Toxicol Appl Pharmacol2011
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Collaborators

University of California los angeles
Co-authored papers 35
Department of Food Hygiene and Environmental Health, University of Helsinki
Co-authored papers 17
Ontario Institute for Cancer Research
Co-authored papers 14
University of Toronto
Co-authored papers 10
University of Western Ontario
Co-authored papers 7
University of Western Ontario
Co-authored papers 7
University of Western Ontario
Co-authored papers 7
Ontario Institute for Cancer Research, University of Toronto
Co-authored papers 7
University of British Columbia
Co-authored papers 6
Princess Margaret Cancer Centre, University Health Network
Co-authored papers 6
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Co-authored papers 6
University of California los angeles
Co-authored papers 6
Ontario Institute for Cancer Research
Co-authored papers 6
Princess Margaret Cancer Centre, University Health Network
Co-authored papers 5
University Health Network, University of Toronto
Co-authored papers 5
Schulich School of Medicine and Dentistry, Western University
Co-authored papers 5
College of Veterinary Medicine, Kansas State University
Co-authored papers 5
Schulich School of Medicine & Dentistry, Western University
Co-authored papers 5
Big Data Institute, University of Oxford
Co-authored papers 5
Schulich School of Medicine & Dentistry, Western University, Victoria Hospital
Co-authored papers 5
University of Toronto
Co-authored papers 5
Schroeder Arthritis Institute, Krembil Research Institute, University Health Network
Co-authored papers 5
University of California los angeles
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University Health Network and University of Toronto
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University of Western Ontario
Co-authored papers 4
Western University
Co-authored papers 4
University of Helsinki
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Schulich School of Medicine and Dentistry, Western University
Co-authored papers 4
Southern Illinois University School of Medicine
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Ontario Institute for Cancer Research
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