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Author Details

Artem S Kasianov
Institute for Information Transmission Problems of the Russian Academy of Sciences
2011
47
13
PMIDPaper TitleJournal TitlePublished Year
36626392Interspecific comparison of gene expression profiles using machine learning.PLoS Comput Biol2023
37375978Aerobiological Monitoring and Metabarcoding of Grass Pollen.Plants (Basel)2023
33479001Draft Genome Sequence of Rhodococcus erythropolis HX7, a Psychrotolerant Soil-Derived Oil Degrader.Microbiol Resour Announc2021
33815435High-Resolution Transcriptome Atlas and Improved Genome Assembly of Common Buckwheat, <i>Fagopyrum esculentum</i>.Front Plant Sci2021
33707335Complete Genome Sequence of <i>Rhodococcus</i> sp. Strain M8, a Platform Strain for Acrylic Monomer Production.Microbiol Resour Announc2021
34913710Draft Genome Sequence of Rhodococcus qingshengii (Formerly <i>erythropolis</i>) TA37, a First-Generation Biocatalyst for Synthesis of Functionalized Acrylamides.Microbiol Resour Announc2021
34966594Transcriptome atlas of <i>Phalaenopsis equestris</i>.PeerJ2021
34899769<i>lepidium-like</i>, a Naturally Occurring Mutant of <i>Capsella bursa-pastoris</i>, and Its Implications on the Evolution of Petal Loss in Cruciferae.Front Plant Sci2021
34072144Molecular Insights into the Role of Cysteine-Rich Peptides in Induced Resistance to <i>Fusarium oxysporum</i> Infection in Tomato Based on Transcriptome Profiling.Int J Mol Sci2021
32295185Signaling Pathways Potentially Responsible for Foam Cell Formation: Cholesterol Accumulation or Inflammatory Response-What is First?Int J Mol Sci2020
33082395Expression of SARS-CoV-2 entry factors in lung epithelial stem cells and its potential implications for COVID-19.Sci Rep2020
33304352Gene Networks Underlying the Resistance of <i>Bifidobacterium longum</i> to Inflammatory Factors.Front Immunol2020
33012225New ancient Eastern European <i>Yersinia pestis</i> genomes illuminate the dispersal of plague in Europe.Philos Trans R Soc Lond B Biol Sci2020
32698877Correction to: Draft genome sequences of Hirudo medicinalis and salivary transcriptome of three closely related medicinal leeches.BMC Genomics2020
32276324Assembly and Analysis of the Complete Mitochondrial Genome of <i>Capsella bursa-pastoris</i>.Plants (Basel)2020
32243532Rapid Accumulation of Mutations in Growing Mycelia of a Hypervariable Fungus Schizophyllum commune.Mol Biol Evol2020
32109377Restraining Lysosomal Activity Preserves Hematopoietic Stem Cell Quiescence and Potency.Cell Stem Cell2020
32545455Toxin-Antitoxin Systems: A Tool for Taxonomic Analysis of Human Intestinal Microbiota.Toxins (Basel)2020
32408719Mitochondrial Genome of <i>Fagopyrum esculentum</i> and the Genetic Diversity of Extranuclear Genomes in Buckwheat.Plants (Basel)2020
32349672Draft genome sequences of Hirudo medicinalis and salivary transcriptome of three closely related medicinal leeches.BMC Genomics2020
30643692Defensin-like peptides in wheat analyzed by whole-transcriptome sequencing: a focus on structural diversity and role in induced resistance.PeerJ2019
31694319Non-Specific Lipid Transfer Proteins in <i>Triticum kiharae</i> Dorof. et Migush.: Identification, Characterization and Expression Profiling in Response to Pathogens and Resistance Inducers.Pathogens2019
31299889The effects of desynchronosis on the gut microbiota composition and physiological parameters of rats.BMC Microbiol2019
31511888Novel bioinformatics quality control metric for next-generation sequencing experiments in the clinical context.Nucleic Acids Res2019
30813912An update to database TraVA: organ-specific cold stress response in Arabidopsis thaliana.BMC Plant Biol2019
30863681Employing toxin-antitoxin genome markers for identification of <i>Bifidobacterium</i> and <i>Lactobacillus</i> strains in human metagenomes.PeerJ2019
30376122Changes in Biological Pathways During 6,000 Years of Civilization in Europe.Mol Biol Evol2019
30650673Comparative Analysis of Developmental Transcriptome Maps of Arabidopsis thaliana and Solanum lycopersicum.Genes (Basel)2019
29439044Draft Genome Sequence of <i>Rhodococcus</i> sp. Strain M8, Which Can Degrade a Broad Range of Nitriles.Genome Announc2018
33250120The complete genome of the oil emulsifying strain Thalassolituus oleivorans K-188 from the Barents Sea.Mar Genomics2018
29386992Intracerebroventricular Administration of <sup>192</sup>IgG-Saporin Alters Expression of Microglia-Associated Genes in the Dorsal But Not Ventral Hippocampus.Front Mol Neurosci2018
29492861Analysis of Housekeeping Genes for Accurate Normalization of qPCR Data During Early Postnatal Brain Development.J Mol Neurosci2018
29163058Adaptive Changes in the Vestibular System of Land Snail to a 30-Day Spaceflight and Readaptation on Return to Earth.Front Cell Neurosci2017
28387959High-quality genome assembly of Capsella bursa-pastoris reveals asymmetry of regulatory elements at early stages of polyploid genome evolution.Plant J2017
28321364Effect of method of deduplication on estimation of differential gene expression using RNA-seq.PeerJ2017
29297306De novo assembling and primary analysis of genome and transcriptome of gray whale Eschrichtius robustus.BMC Evol Biol2017
27549386A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA-seq profiling.Plant J2016
26586801HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models.Nucleic Acids Res2016
27790092Upstream Open Reading Frames Located in the Leader of Protein Kinase Mζ mRNA Regulate Its Translation.Front Mol Neurosci2016
25894918Complete Genome Sequence of Bifidobacterium longum GT15: Identification and Characterization of Unique and Global Regulatory Genes.Microb Ecol2015
24670764A promoter-level mammalian expression atlas.Nature2014
25477406Draft Genome Sequence of Streptomyces fradiae ATCC 19609, a Strain Highly Sensitive to Antibiotics.Genome Announc2014
25523785Complete Genome Sequence of Bifidobacterium longum GT15: Unique Genes for Russian Strains.Genome Announc2014
23175603HOCOMOCO: a comprehensive collection of human transcription factor binding sites models.Nucleic Acids Res2013
21232141De novo sequencing and characterization of floral transcriptome in two species of buckwheat (Fagopyrum).BMC Genomics2011
21442895[Preferred distances between DNA binding sites for factors regulating transcription initiation].Biofizika2011
21852305A deeper look into transcription regulatory code by preferred pair distance templates for transcription factor binding sites.Bioinformatics2011
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Collaborators

Vavilov Institute of General Genetics, Russian Academy of Sciences
Co-authored papers 12
Vavilov Institute of General Genetics, Russian Academy of Sciences
Co-authored papers 8
Research Center of Biotechnology RAS, Russian Academy of Sciences
Co-authored papers 4
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 3
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Co-authored papers 3
Co-authored papers 2
University of Copenhagen
Co-authored papers 1
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Co-authored papers 1
International Institute of Molecular and Cell Biology in Warsaw
Co-authored papers 1
Harvard Medical School
Co-authored papers 1
Kyungpook National University, Kyungpook National University Hospital
Co-authored papers 1
Leiden University Medical Center
Co-authored papers 1
Tohoku University Graduate School of Medicine
Co-authored papers 1
South African Medical Research Council (SAMRC), University of Cape Town
Co-authored papers 1
Australian Institute for Bioengineering and Nanotechnology, University of Queensland
Co-authored papers 1
German Center for Neurodegenerative Diseases (DZNE).
Co-authored papers 1
Harvard School of Public Health
Co-authored papers 1
International Centre for Genetic Engineering and Biotechnology
Co-authored papers 1
Istituto Italiano di Tecnologia
Co-authored papers 1
RIKEN Research Center for Allergy and Immunology
Co-authored papers 1
Yokohama National University
Co-authored papers 1
International Research Center for Medical Sciences (IRCMS), Kumamoto University
Co-authored papers 1
RIKEN Yokohama Institute
Co-authored papers 1
International Centre for Genetic Engineering and Biotechnology
Co-authored papers 1
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Center for Molecular Medicine and Genetics, Wayne State University
Co-authored papers 1
Institute of Genetics and Cancer, University of Edinburgh
Co-authored papers 1
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Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences
Co-authored papers 1