Skip to Main Content

Author Details

Siyuan John Liu
University of California San Francisco.
2010
25
19
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36993679Merlin<sup>S13</sup> phosphorylation controls meningioma Wnt signaling and magnetic resonance imaging features.Res Sq2023
37292686Spatial genomic, biochemical, and cellular mechanisms drive meningioma heterogeneity and evolution.Res Sq2023
35061986Resection with intraoperative cesium-131 brachytherapy as salvage therapy for recurrent brain tumors.J Neurosurg2022
35534562Meningioma DNA methylation groups identify biological drivers and therapeutic vulnerabilities.Nat Genet2022
36381608Dual genome-wide coding and lncRNA screens in neural induction of induced pluripotent stem cells.Cell Genom2022
33326085Genome-Scale Perturbation of Long Noncoding RNA Expression Using CRISPR Interference.Methods Mol Biol2021
33758101miRNA-independent function of long noncoding pri-miRNA loci.Proc Natl Acad Sci U S A2021
33953369Long noncoding RNAs in cancer metastasis.Nat Rev Cancer2021
31901251Outer Radial Glia-like Cancer Stem Cells Contribute to Heterogeneity of Glioblastoma.Cell Stem Cell2020
31112699The Long Noncoding RNA Pnky Is a Trans-acting Regulator of Cortical Development In Vivo.Dev Cell2019
29731168Promoter of lncRNA Gene PVT1 Is a Tumor-Suppressor DNA Boundary Element.Cell2018
30206764Reirradiation and PD-1 inhibition with nivolumab for the treatment of recurrent diffuse intrinsic pontine glioma: a single-institution experience.J Neurooncol2018
29897414CONICS integrates scRNA-seq with DNA sequencing to map gene expression to tumor sub-clones.Bioinformatics2018
30467236Modulating the expression of long non-coding RNAs for functional studies.EMBO Rep2018
27980086CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells.Science2017
29217575Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex.Science2017
29262845Single-cell profiling of human gliomas reveals macrophage ontogeny as a basis for regional differences in macrophage activation in the tumor microenvironment.Genome Biol2017
27081004Single-cell analysis of long non-coding RNAs in the developing human neocortex.Genome Biol2016
27888226Single-cell sequencing maps gene expression to mutational phylogenies in PDGF- and EGF-driven gliomas.Mol Syst Biol2016
27153637SCell: integrated analysis of single-cell RNA-seq data.Bioinformatics2016
25800779The long noncoding RNA Pnky regulates neuronal differentiation of embryonic and postnatal neural stem cells.Cell Stem Cell2015
26406371Molecular identity of human outer radial glia during cortical development.Cell2015
25176653Activation of neuronal gene expression by the JMJD3 demethylase is required for postnatal and adult brain neurogenesis.Cell Rep2014
21663792Pluripotency factors in embryonic stem cells regulate differentiation into germ layers.Cell2011
20194121Logic integration of mRNA signals by an RNAi-based molecular computer.Nucleic Acids Res2010
  • 1 - 25 of 25

Recommended Authors

Kimaada Allette
Icahn School of Medicine at Mount Sinai
Career Start Year 2016
Number of shared co-authors 1
Brian L Gudenas
St Jude Children's Research Hospital
Career Start Year 2015
Number of shared co-authors 0
Komal S Rathi
Center for Data-Driven Discovery in Biomedicine, Children's Hospital of Philadelphia
Career Start Year 2014
Number of shared co-authors 2
Rabi Murad
Sanford Burnham Prebys Medical Discovery Institute
Career Start Year 2014
Number of shared co-authors 1
Emily C Wheeler
University of California
Career Start Year 2014
Number of shared co-authors 0
Daria Merkurjev
University of California
Career Start Year 2013
Number of shared co-authors 0
Ruben Dries
Boston University School of Medicine
Career Start Year 2011
Number of shared co-authors 0
Asha A Nair
Mayo Clinic
Career Start Year 2010
Number of shared co-authors 0
Rahul K Kollipara
McDermott Center for Human Growth and Development.
Career Start Year 2010
Number of shared co-authors 0
Jeremy M Simon
University of North Carolina
Career Start Year 2010
Number of shared co-authors 0
Anca Sorana Morrissy
Cumming School of Medicine, University of Calgary
Career Start Year 2009
Number of shared co-authors 5
Christian Huisman
Pape Family Pediatric Research Institute, Oregon Health & Science University
Career Start Year 2008
Number of shared co-authors 0
Richard Mitter
The Francis Crick Institute
Career Start Year 2008
Number of shared co-authors 1
Raj Chari
The National Institutes of Health
Career Start Year 2006
Number of shared co-authors 0
Igor Ulitsky
Weizmann Institute of Science
Career Start Year 2006
Number of shared co-authors 3
Henry Yang
Cancer Science Institute of Singapore, National University of Singapore
Career Start Year 2005
Number of shared co-authors 0
Yongjun Zhao
Canada British Columbia Cancer Research Centre, University of British Columbia
Career Start Year 2005
Number of shared co-authors 5
Maggie Cam
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Career Start Year 2005
Number of shared co-authors 0
Loyal A Goff
Johns Hopkins University School of Medicine
Career Start Year 2004
Number of shared co-authors 0
Jay W Shin
Genome Institute of Singapore (GIS)
Career Start Year 2004
Number of shared co-authors 2
Zhandong Liu
Jan and Dan Duncan Neurological Research Institute at Texas Children's Hospital
Career Start Year 2003
Number of shared co-authors 3
Pavel Sumazin
Baylor College of Medicine
Career Start Year 2003
Number of shared co-authors 1
Fuchou Tang
College of Life Sciences
Career Start Year 2002
Number of shared co-authors 0
Marcel E Dinger
The University of Sydney
Career Start Year 2000
Number of shared co-authors 1
Sven Diederichs
Medical Center - University of Freiburg, University of Freiburg
Career Start Year 1999
Number of shared co-authors 0
Xiang Chen
St. Jude Children's Research Hospital
Career Start Year 1999
Number of shared co-authors 0
Sten Linnarsson
Karolinska Institute
Career Start Year 1995
Number of shared co-authors 2
Alistair R R Forrest
RIKEN Center for Integrative Medical Sciences
Career Start Year 1994
Number of shared co-authors 1
Marco A Marra
University of British Columbia
Career Start Year 1993
Number of shared co-authors 11
Aviv Regev
Broad Institute of MIT and Harvard
Career Start Year 1987
Number of shared co-authors 9

Collaborators

Daniel A Lim
University of California san francisco
Co-authored papers 18
Aaron Diaz
University of California san francisco
Co-authored papers 8
Arnold R Kriegstein
University of California san francisco
Co-authored papers 8
Tomasz J Nowakowski
University of California san francisco
Co-authored papers 7
Max A Horlbeck
Broad Institute of MIT and Harvard
Co-authored papers 5
Jonathan S Weissman
Whitehead Institute for Biomedical Research
Co-authored papers 5
David R Raleigh
University of California san francisco
Co-authored papers 5
Stephen T Magill
Feinberg School of Medicine, Northwestern University
Co-authored papers 4
Harish N Vasudevan
University of California San Francisco
Co-authored papers 4
Calixto-Hope G Lucas
University of California San Francisco
Co-authored papers 4
Daniel He
Co-authored papers 3
Abrar Choudhury
University of California San Francisco
Co-authored papers 3
Steve E Braunstein
University of California san francisco
Co-authored papers 3
Arie Perry
University of California san francisco
Co-authored papers 2
Penny K Sneed
University of California San Francisco
Co-authored papers 2
Kyounghee Seo
University of California san francisco
Co-authored papers 2
Javier E Villanueva-Meyer
University of California san francisco
Co-authored papers 2
Danielle L Swaney
J. David Gladstone Institutes
Co-authored papers 2
David A Solomon
University of California san francisco
Co-authored papers 2
Gary Kohanbash
Co-authored papers 2
Howard Y Chang
Center for Personal Dynamic Regulomes, Stanford University
Co-authored papers 2
Joseph F Costello
University of California san francisco
Co-authored papers 2
Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 2
Joanna J Phillips
University of California san francisco
Co-authored papers 2
Manish K Aghi
University of California san francisco
Co-authored papers 2
Seung Woo Cho
Center for Genomic Integrity, Institute for Basic Science
Co-authored papers 2
Michael W McDermott
University of California san francisco
Co-authored papers 2
Cassie Kline
Children's Hospital of Philadelphia
Co-authored papers 1
Bruce R Conklin
Gladstone Institutes
Co-authored papers 1
Julien Spatazza
Neurona Therapeutics Inc.
Co-authored papers 1
Release 1.2