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Author Details

Kristen Lee
Altius Institute for Biomedical Sciences
2006
18
16
Nathan Sheffield (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
32460018Global Regulatory DNA Potentiation by SMARCA4 Propagates to Selective Gene Expression Programs via Domain-Level Remodeling.Cell Rep2020
32460018Global Regulatory DNA Potentiation by SMARCA4 Propagates to Selective Gene Expression Programs via Domain-Level Remodeling.Cell Rep2020
32579918Global Regulatory DNA Potentiation by SMARCA4 Propagates to Selective Gene Expression Programs via Domain-Level Remodeling.Cell Rep2020
32728250Global reference mapping of human transcription factor footprints.Nature2020
32728217Index and biological spectrum of human DNase I hypersensitive sites.Nature2020
32579918Global Regulatory DNA Potentiation by SMARCA4 Propagates to Selective Gene Expression Programs via Domain-Level Remodeling.Cell Rep2020
32728250Global reference mapping of human transcription factor footprints.Nature2020
32728217Index and biological spectrum of human DNase I hypersensitive sites.Nature2020
30202056Integrative detection and analysis of structural variation in cancer genomes.Nat Genet2018
30202056Integrative detection and analysis of structural variation in cancer genomes.Nat Genet2018
26257180Role of DNA Methylation in Modulating Transcription Factor Occupancy.Cell Rep2015
26257180Role of DNA Methylation in Modulating Transcription Factor Occupancy.Cell Rep2015
25409825Conservation of trans-acting circuitry during mammalian regulatory evolution.Nature2014
25411453Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution.Science2014
25409824A comparative encyclopedia of DNA elements in the mouse genome.Nature2014
25409825Conservation of trans-acting circuitry during mammalian regulatory evolution.Nature2014
25411453Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution.Science2014
25409824A comparative encyclopedia of DNA elements in the mouse genome.Nature2014
23821440Genome-scale mapping of DNase I hypersensitivity.Curr Protoc Mol Biol2013
23821440Genome-scale mapping of DNase I hypersensitivity.Curr Protoc Mol Biol2013
22955617The accessible chromatin landscape of the human genome.Nature2012
22955980Widespread plasticity in CTCF occupancy linked to DNA methylation.Genome Res2012
22955828Systematic localization of common disease-associated variation in regulatory DNA.Science2012
22955618An expansive human regulatory lexicon encoded in transcription factor footprints.Nature2012
22955617The accessible chromatin landscape of the human genome.Nature2012
22955980Widespread plasticity in CTCF occupancy linked to DNA methylation.Genome Res2012
22955828Systematic localization of common disease-associated variation in regulatory DNA.Science2012
22955618An expansive human regulatory lexicon encoded in transcription factor footprints.Nature2012
22056677Rapid empirical discovery of optimal peptides for targeted proteomics.Nat Methods2011
22056677Rapid empirical discovery of optimal peptides for targeted proteomics.Nat Methods2011
19055709Assaying the regulatory potential of mammalian conserved non-coding sequences in human cells.Genome Biol2008
19055709Assaying the regulatory potential of mammalian conserved non-coding sequences in human cells.Genome Biol2008
17571346Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.Nature2007
17571346Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.Nature2007
16791208Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays.Nat Methods2006
16791208Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays.Nat Methods2006
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Collaborators

John A Stamatoyannopoulos
Altius Institute for Biomedical Sciences
Co-authored papers 17
Richard Sandstrom
Altius Institute for Biomedical Sciences
Co-authored papers 12
Morgan Diegel
Altius Institute for Biomedical Sciences
Co-authored papers 11
Fidencio Neri
Altius Institute for Biomedical Sciences
Co-authored papers 11
Robert E Thurman
University of Washington
Co-authored papers 10
Peter J Sabo
University of Washington
Co-authored papers 10
Rajinder Kaul
Altius Institute for Biomedical Sciences
Co-authored papers 10
Theresa K Canfield
University of Washington
Co-authored papers 9
Douglas Dunn
Altius Institute for Biomedical Sciences
Co-authored papers 9
Audra K Johnson
Altius Institute for Biomedical Sciences
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Eric Haugen
Altius Institute for Biomedical Sciences
Co-authored papers 8
Hao Wang
Altius Institute for Biomedical Sciences
Co-authored papers 8
Alex P Reynolds
Altius Institute for Biomedical Sciences
Co-authored papers 8
Jeff Vierstra
Altius Institute for Biomedical Sciences
Co-authored papers 8
Richard Humbert
University of Washington
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Eric Rynes
Altius Institute for Biomedical Sciences
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Shane Neph
Altius Institute for Biomedical Sciences
Co-authored papers 7
Molly Weaver
University of Kentucky
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Daniel Bates
Altius Institute for Biomedical Sciences
Co-authored papers 7
Erika Giste
University of Washington
Co-authored papers 6
R S Hansen
University of Washington
Co-authored papers 6
Anthony Shafer
University of Washington
Co-authored papers 6
Shinny Vong
University of Washington
Co-authored papers 6
Matthew T Maurano
Institute for Systems Genetics, NYU School of Medicine
Co-authored papers 5
Michael O Dorschner
University of Washington
Co-authored papers 4
Jessica Halow
Co-authored papers 4
Sam John
National Cancer Institute
Co-authored papers 4
Andrew B Stergachis
University of Washington School of Medicine
Co-authored papers 4
Tanya Kutyavin
Altius Institute for Biomedical Sciences
Co-authored papers 4
Ross C Hardison
Co-authored papers 3
Release 1.2