Author details

Full Name

Thomas H Hampton

Affiliation

Geisel School of Medicine, Dartmouth College

ORCID

Career Start Year

2007

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36661299	Community composition shapes microbial-specific phenotypes in a cystic fibrosis polymicrobial model system.	Elife	2023
37491532	Comparative effects of CFTR modulators on phagocytic, metabolic and inflammatory profiles of CF and nonCF macrophages.	Sci Rep	2023
37662412	Analysis of <i>Pseudomonas aeruginosa</i> transcription in an <i>ex vivo</i> cystic fibrosis sputum model identifies metal restriction as a gene expression stimulus.	bioRxiv	2023
37577487	An In Vitro Medium for Modeling Gut Dysbiosis Associated with Cystic Fibrosis.	bioRxiv	2023
37975659	Rocket-miR, a translational launchpad for miRNA-based antimicrobial drug development.	mSystems	2023
37256658	An rRNA fragment in extracellular vesicles secreted by human airway epithelial cells increases the fluoroquinolone sensitivity of <i>P. aeruginosa</i>.	Am J Physiol Lung Cell Mol Physiol	2023
37287312	PlmCas12e (CasX2) cleavage of CCR5: impact of guide RNA spacer length and PAM sequence on cleavage activity.	RNA Biol	2023
37404016	Development of the intestinal microbiome in cystic fibrosis in early life.	mSphere	2023
36711562	CAS12e (CASX2) CLEAVAGE OF CCR5: IMPACT OF GUIDE RNA LENGTH AND PAM SEQUENCE ON CLEAVAGE ACTIVITY.	bioRxiv	2023
36183834	Tryptophan mutations in G3BP1 tune the stability of a cellular signaling hub by weakening transient interactions with Caprin1 and USP10.	J Biol Chem	2022
35710652	CF-Seq, an accessible web application for rapid re-analysis of cystic fibrosis pathogen RNA sequencing studies.	Sci Data	2022
36259735	ESKAPE Act Plus: Pathway Activation Analysis for Bacterial Pathogens.	mSystems	2022
33471607	CF monocyte-derived macrophages have an attenuated response to extracellular vesicles secreted by airway epithelial cells.	Am J Physiol Lung Cell Mol Physiol	2021
33795318	Healthy versus inflamed lung environments differentially affect mesenchymal stromal cells.	Eur Respir J	2021
33758032	GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses.	mSystems	2021
33727344	One versus Many: Polymicrobial Communities and the Cystic Fibrosis Airway.	mBio	2021
34579569	The Burkholderia cenocepacia Type VI Secretion System Effector TecA Is a Virulence Factor in Mouse Models of Lung Infection.	mBio	2021
34544277	Model Systems to Study the Chronic, Polymicrobial Infections in Cystic Fibrosis: Current Approaches and Exploring Future Directions.	mBio	2021
34260396	Let-7b-5p in vesicles secreted by human airway cells reduces biofilm formation and increases antibiotic sensitivity of <i>P. aeruginosa</i>.	Proc Natl Acad Sci U S A	2021
34232099	Mild Cystic Fibrosis Lung Disease Is Associated with Bacterial Community Stability.	Microbiol Spectr	2021
32289118	Specificity in PDZ-peptide interaction networks: Computational analysis and review.	J Struct Biol X	2020
31685535	Availability of Zinc Impacts Interactions between Streptococcus sanguinis and Pseudomonas aeruginosa in Coculture.	J Bacteriol	2020
31980538	<i>Pseudomonas aeruginosa lasR</i> mutant fitness in microoxia is supported by an Anr-regulated oxygen-binding hemerythrin.	Proc Natl Acad Sci U S A	2020
32901521	Differential effects of the cystic fibrosis lung inflammatory environment on mesenchymal stromal cells.	Am J Physiol Lung Cell Mol Physiol	2020
32616918	Altered iron metabolism in cystic fibrosis macrophages: the impact of CFTR modulators and implications for Pseudomonas aeruginosa survival.	Sci Rep	2020
32668165	SARS-CoV-2 (COVID-19) and cystic fibrosis.	Am J Physiol Lung Cell Mol Physiol	2020
32521165	Selection of reference genes for quantitative PCR: identifying reference genes for airway epithelial cells exposed to <i>Pseudomonas aeruginosa</i>.	Am J Physiol Lung Cell Mol Physiol	2020
32238195	Lung function and microbiota diversity in cystic fibrosis.	Microbiome	2020
32514536	Single-cell RNA-seq Analysis Reveals That Prenatal Arsenic Exposure Results in Long-term, Adverse Effects on Immune Gene Expression in Response to Influenza A Infection.	Toxicol Sci	2020
30476744	Profiling microRNA expression in Atlantic killifish (Fundulus heteroclitus) gill and responses to arsenic and hyperosmotic stress.	Aquat Toxicol	2019
31270372	Functional and metabolic impairment in cigarette smoke-exposed macrophages is tied to oxidative stress.	Sci Rep	2019
29146575	Lumacaftor (VX-809) restores the ability of CF macrophages to phagocytose and kill Pseudomonas aeruginosa.	Am J Physiol Lung Cell Mol Physiol	2018
29979584	Arsenic Reduces Gene Expression Response to Changing Salinity in Killifish.	Environ Sci Technol	2018
28982736	An epoxide hydrolase secreted by Pseudomonas aeruginosa decreases mucociliary transport and hinders bacterial clearance from the lung.	Am J Physiol Lung Cell Mol Physiol	2018
27942839	Immune modulation associated with vascular endothelial growth factor (VEGF) blockade in patients with glioblastoma.	Cancer Immunol Immunother	2017
28201664	The landscape of extreme genomic variation in the highly adaptable Atlantic killifish.	Genome Biol Evol	2017
29036513	ScanGEO: parallel mining of high-throughput gene expression data.	Bioinformatics	2017
28719869	Effectiveness of table top water pitcher filters to remove arsenic from drinking water.	Environ Res	2017
27980032	Pseudomonas aeruginosa sabotages the generation of host proresolving lipid mediators.	Proc Natl Acad Sci U S A	2017
26974965	The mitogen-activated protein kinase pathway plays a critical role in regulating immunological properties of BRAF mutant cutaneous melanoma cells.	Melanoma Res	2016
27481238	Use of a Multiplex Transcript Method for Analysis of Pseudomonas aeruginosa Gene Expression Profiles in the Cystic Fibrosis Lung.	Infect Immun	2016
27295279	A Novel Mechanism of Host-Pathogen Interaction through sRNA in Bacterial Outer Membrane Vesicles.	PLoS Pathog	2016
26943329	Analysis of Lung Microbiota in Bronchoalveolar Lavage, Protected Brush and Sputum Samples from Subjects with Mild-To-Moderate Cystic Fibrosis Lung Disease.	PLoS One	2016
25618892	Regulatory T cells are not a strong predictor of survival for patients with glioblastoma.	Neuro Oncol	2015
24332997	Iron supplementation does not worsen respiratory health or alter the sputum microbiome in cystic fibrosis.	J Cyst Fibros	2014
25408892	Characterization and quantification of the fungal microbiome in serial samples from individuals with cystic fibrosis.	Microbiome	2014
25068658	The microbiota regulates susceptibility to Fas-mediated acute hepatic injury.	Lab Invest	2014
25071935	The microbiome in pediatric cystic fibrosis patients: the role of shared environment suggests a window of intervention.	Microbiome	2014
25097758	Letter to the editor.	J Immunother Cancer	2014
25158801	Natural selection canalizes expression variation of environmentally induced plasticity-enabling genes.	Mol Biol Evol	2014

1 - 50 of 68

Angela L Jones

Vanderbilt University Medical Center

Career Start Year 2015

Number of shared co-authors 0

James Fitch

The Institute for Genomic Medicine, Nationwide Children's Hospital

Career Start Year 2015

Number of shared co-authors 0

Kaitlin J Flynn

Center for Systems Immunology, Benaroya Research Institute at Virginia Mason

Career Start Year 2014

Number of shared co-authors 0

Eugene T Dillon

Conway Institute of Biomolecular and Biomedical Research

Career Start Year 2014

Number of shared co-authors 0

Brendon P Scicluna

Mater Dei Hospital, University of Malta

Career Start Year 2009

Number of shared co-authors 0

Cameron Ross MacPherson

Rigshospitalet, Copenhagen University Hospital

Career Start Year 2008

Number of shared co-authors 0

Timothy L Tickle

Broad Institute

Career Start Year 2007

Number of shared co-authors 0

Jonathan E Bard

University at Buffalo

Career Start Year 2007

Number of shared co-authors 0

Matthew C Altman

University of Washington School of Medicine, Seattle Benaroya Research Institute

Career Start Year 2007

Number of shared co-authors 0

Robert P Dickson

University of Michigan Health System ann arbor

Career Start Year 2006

Number of shared co-authors 1

Shannan J Ho Sui

Harvard T.H. Chan School of Public Health

Career Start Year 2004

Number of shared co-authors 0

Jennifer J Barb

Clinical Center, National Institutes of Health

Career Start Year 2004

Number of shared co-authors 0

Susan V Lynch

University of California san francisco

Career Start Year 2004

Number of shared co-authors 0

Ami S Bhatt

Stanford University

Career Start Year 2003

Number of shared co-authors 0

Hugh D Mitchell

Pacific Northwest National Laboratory (PNNL)

Career Start Year 2002

Number of shared co-authors 0

Robert J Freishtat

Center for Genetic Medicine Research, Children's National Research Institute

Career Start Year 2002

Number of shared co-authors 0

Harm van Bakel

Icahn School of Medicine at Mount Sinai

Career Start Year 2002

Number of shared co-authors 0

David J Lynn

South Australian Health and Medical Research Institute

Career Start Year 2002

Number of shared co-authors 0

Purvesh Khatri

University of California San Francisco

Career Start Year 2002

Number of shared co-authors 0

Erliang Zeng

College of Dentistry, University of Iowa

Career Start Year 2001

Number of shared co-authors 1

David K Crossman

University of Alabama at Birmingham

Career Start Year 2000

Number of shared co-authors 0

Karsten Hokamp

Smurfit Institute of Genetics, Trinity College of Dublin

Career Start Year 1999

Number of shared co-authors 0

Shawn Levy

HudsonAlpha Institute for Biotechnology

Career Start Year 1999

Number of shared co-authors 1

David R Powell

Biomedicine Discovery Institute, Monash University

Career Start Year 1998

Number of shared co-authors 0

Wenzhong Xiao

Stanford University

Career Start Year 1997

Number of shared co-authors 0

Anthony A Fodor

University of North Carolina at Charlotte

Career Start Year 1997

Number of shared co-authors 0

Roger E Bumgarner

University of Washington

Career Start Year 1992

Number of shared co-authors 1

Ramnik J Xavier

Broad Institute of MIT and Harvard

Career Start Year 1989

Number of shared co-authors 0

Roderick V Jensen

Virginia Tech

Career Start Year 1985

Number of shared co-authors 0

Uwe V??lker

University Medicine

Career Start Year 1974

Number of shared co-authors 0

row(s) 1 - 30 of 30

Bruce A Stanton

Dartmouth College

Co-authored papers 30

George A O'Toole

Geisel School of Medicine at Dartmouth

Co-authored papers 18

Deborah A Hogan

Geisel School of Medicine at Dartmouth

Co-authored papers 16

Mitchell L Sogin

Co-authored papers 8

Camilo E Fadul

University of Virginia Health System

Co-authored papers 8

Jiang Gui

Geisel School of Medicine at Dartmouth

Co-authored papers 5

John K Colbourne

University of Birmingham

Co-authored papers 4

Gregory J Tsongalis

Dartmouth Health and the Dartmouth Cancer Center, USA Geisel School of Medicine

Co-authored papers 3

John H Hammond

Massachusetts Institute of Technology

Co-authored papers 3

Benjamin L King

Co-authored papers 3

Juliette C Madan

Co-authored papers 3

Carolyn J Mattingly

North Carolina State University

Co-authored papers 2

Alexandra J Lee

University of Pennsylvania

Co-authored papers 2

Kathleen D Liu

University of California san francisco

Co-authored papers 2

Craig R Tomlinson

Norris Cotton Cancer Center, Geisel School of Medicine at Dartmouth

Co-authored papers 2

Casey S Greene

Dartmouth College Geisel School of Medicine, Princeton University, University of Colorado Anschutz Medical Campus, University of Pennsylvania Perelman School of Medicine

Co-authored papers 2

Georgia Doing

Geisel School of Medicine at Dartmouth

Co-authored papers 2

Michael A Matthay

Cardiovascular Research Institute, University of California san francisco

Co-authored papers 2

Britton C Goodale

Oregon State University

Co-authored papers 2

Courtney E Price

Geisel School of Medicine at Dartmouth