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Author Details

Sirarat Sarntivijai
European Bioinformatics Institute (EMBL-EBI)
2007
24
10
PMIDPaper TitleJournal TitlePublished Year
37842337ELIXIR and Toxicology: a community in development.F1000Res2023
35602243eTRANSAFE: Building a sustainable framework to share reproducible drug safety knowledge with the public domain.F1000Res2022
33637997Guidelines for FAIR sharing of preclinical safety and off-target pharmacology data.ALTEX2021
31272374Cells in ExperimentaL Life Sciences (CELLS-2018): capturing the knowledge of normal and diseased cells with ontologies.BMC Bioinformatics2019
31824649An intrinsically disordered proteins community for ELIXIR.F1000Res2019
31272389OSCI: standardized stem cell ontology representation and use cases for stem cell investigation.BMC Bioinformatics2019
27899665Open Targets: a platform for therapeutic target identification and validation.Nucleic Acids Res2017
28469412Use of Biomedical Ontologies for Integration of Biological Knowledge for Learning and Prediction of Adverse Drug Reactions.Gene Regul Syst Bio2017
29322930Ontological representation, integration, and analysis of LINCS cell line cells and their cellular responses.BMC Bioinformatics2017
29322916Cells in experimental life sciences - challenges and solution to the rapid evolution of knowledge.BMC Bioinformatics2017
29322915Comparison, alignment, and synchronization of cell line information between CLO and EFO.BMC Bioinformatics2017
29322912Usage of cell nomenclature in biomedical literature.BMC Bioinformatics2017
28682240Building bridges between cellular and molecular structural biology.Elife2017
26865945Reporting phenotypes in mouse models when considering body size as a potential confounder.J Biomed Semantics2016
27377652The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability.J Biomed Semantics2016
27042287Webulous and the Webulous Google Add-On--a web service and application for ontology building from templates.J Biomed Semantics2016
27011785Linking rare and common disease: mapping clinical disease-phenotypes to ontologies in therapeutic target validation.J Biomed Semantics2016
27003817Linking MedDRA(®)-Coded Clinical Phenotypes to Biological Mechanisms by the Ontology of Adverse Events: A Pilot Study on Tyrosine Kinase Inhibitors.Drug Saf2016
25093068OAE: The Ontology of Adverse Events.J Biomed Semantics2014
25852852CLO: The cell line ontology.J Biomed Semantics2014
25056395Use of internet search logs to evaluate potential drug adverse events.Clin Pharmacol Ther2014
23209624Ontology-based combinatorial comparative analysis of adverse events associated with killed and live influenza vaccines.PLoS One2012
18849319A bioinformatics analysis of the cell line nomenclature.Bioinformatics2008
18694200The Cell Line Ontology and its use in tagging cell line names in biomedical text.AMIA Annu Symp Proc2007
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Collaborators

Yongqun He
University of Michigan Medical School ann arbor
Co-authored papers 10
Helen Parkinson
European Bioinformatics Institute
Co-authored papers 7
Brian D Athey
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Co-authored papers 5
Alexander D Diehl
Jacobs School of Medicine and Biomedical Sciences, University at Buffalo
Co-authored papers 5
James Malone
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Co-authored papers 4
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Co-authored papers 3
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OncProTech LLC
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College of Literature, University of Michigan ann arbor
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Simon Jupp
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School of Pharmaceutical Sciences, Sun Yat-sen University
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Miller School of Medicine, University of Miami
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Tony Burdett
European Bioinformatics Institute
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John M Hancock
the University of Texas Health Science Center at Houston
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Ian Dunham
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 2
Gilbert S Omenn
and School of Public Health, University of Michigan ann arbor
Co-authored papers 2
Christopher J Mungall
International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences
Co-authored papers 2
Jie Zheng
University of Pennsylvania Perelman School of Medicine
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Matthew H Brush
University of Colorado Anschutz Medical Campus
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Melissa A Haendel
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Aleksandras Gutmanas
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Alan Bridge
carnegie mellon university
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Release 1.2