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Author Details

Chaok Seok
Seoul National University
1998
106
34
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36243970HProteome-BSite: predicted binding sites and ligands in human 3D proteome.Nucleic Acids Res2023
36243970HProteome-BSite: predicted binding sites and ligands in human 3D proteome.Nucleic Acids Res2023
38062020Understanding the molecular mechanisms of odorant binding and activation of the human OR52 family.Nat Commun2023
36809651GalaxyDock2-HEME: Protein-ligand docking for heme proteins.J Comput Chem2023
36564921Atomic-level thermodynamics analysis of the binding free energy of SARS-CoV-2 neutralizing antibodies.Proteins2023
37185776Ebastine impairs metastatic spread in triple-negative breast cancer by targeting focal adhesion kinase.Cell Mol Life Sci2023
36847771Benchmarking applicability of medium-resolution cryo-EM protein structures for structure-based drug design.J Comput Chem2023
36525977Structural basis for Y2 receptor-mediated neuropeptide Y and peptide YY signaling.Structure2023
38062020Understanding the molecular mechanisms of odorant binding and activation of the human OR52 family.Nat Commun2023
37185776Ebastine impairs metastatic spread in triple-negative breast cancer by targeting focal adhesion kinase.Cell Mol Life Sci2023
36847771Benchmarking applicability of medium-resolution cryo-EM protein structures for structure-based drug design.J Comput Chem2023
36809651GalaxyDock2-HEME: Protein-ligand docking for heme proteins.J Comput Chem2023
36564921Atomic-level thermodynamics analysis of the binding free energy of SARS-CoV-2 neutralizing antibodies.Proteins2023
36525977Structural basis for Y2 receptor-mediated neuropeptide Y and peptide YY signaling.Structure2023
35165283Structural basis of neuropeptide Y signaling through Y1 receptor.Nat Commun2022
35749367GalaxyWater-CNN: Prediction of Water Positions on the Protein Structure by a 3D-Convolutional Neural Network.J Chem Inf Model2022
35662464GalaxyDomDock: An Ab Initio Domain-domain Docking Web Server for Multi-domain Protein Structure Prediction.J Mol Biol2022
36514334CSAlign and CSAlign-Dock: Structure alignment of ligands considering full flexibility and application to protein-ligand docking.Comput Struct Biotechnol J2022
36544468Evaluating GPCR modeling and docking strategies in the era of deep learning-based protein structure prediction.Comput Struct Biotechnol J2022
35217654Author Correction: Structural basis of neuropeptide Y signaling through Y1 receptor.Nat Commun2022
35165283Structural basis of neuropeptide Y signaling through Y1 receptor.Nat Commun2022
35110580Author Correction: Sclerostin inhibits Wnt signaling through tandem interaction with two LRP6 ectodomains.Nat Commun2022
35074425A pGpG-specific phosphodiesterase regulates cyclic di-GMP signaling in Vibrio cholerae.J Biol Chem2022
35662464GalaxyDomDock: An Ab Initio Domain-domain Docking Web Server for Multi-domain Protein Structure Prediction.J Mol Biol2022
35749367GalaxyWater-CNN: Prediction of Water Positions on the Protein Structure by a 3D-Convolutional Neural Network.J Chem Inf Model2022
36544468Evaluating GPCR modeling and docking strategies in the era of deep learning-based protein structure prediction.Comput Struct Biotechnol J2022
36514334CSAlign and CSAlign-Dock: Structure alignment of ligands considering full flexibility and application to protein-ligand docking.Comput Struct Biotechnol J2022
35074425A pGpG-specific phosphodiesterase regulates cyclic di-GMP signaling in Vibrio cholerae.J Biol Chem2022
35217654Author Correction: Structural basis of neuropeptide Y signaling through Y1 receptor.Nat Commun2022
35110580Author Correction: Sclerostin inhibits Wnt signaling through tandem interaction with two LRP6 ectodomains.Nat Commun2022
34048578GalaxyHeteromer: protein heterodimer structure prediction by template-based and ab initio docking.Nucleic Acids Res2021
34013268Dynamic Interactions of Fully Glycosylated SARS-CoV-2 Spike Protein with Various Antibodies.bioRxiv2021
34168770Symmetry-related residues as promising hotspots for the evolution of <i>de novo</i> oligomeric enzymes.Chem Sci2021
33689337Structure, Dynamics, Receptor Binding, and Antibody Binding of the Fully Glycosylated Full-Length SARS-CoV-2 Spike Protein in a Viral Membrane.J Chem Theory Comput2021
34048578GalaxyHeteromer: protein heterodimer structure prediction by template-based and ab initio docking.Nucleic Acids Res2021
33938216GalaxyWater-wKGB: Prediction of Water Positions on Protein Structure Using wKGB Statistical Potential.J Chem Inf Model2021
34324227Assessment of protein model structure accuracy estimation in CASP14: Old and new challenges.Proteins2021
34462960Modeling SARS-CoV-2 proteins in the CASP-commons experiment.Proteins2021
34486824Discovery of a transdermally deliverable pentapeptide for activating AdipoR1 to promote hair growth.EMBO Mol Med2021
34363243Protein oligomer structure prediction using GALAXY in CASP14.Proteins2021
34529436Dynamic Interactions of Fully Glycosylated SARS-CoV-2 Spike Protein with Various Antibodies.J Chem Theory Comput2021
34693166MOLGENGO: Finding Novel Molecules with Desired Electronic Properties by Capitalizing on Their Global Optimization.ACS Omega2021
33689337Structure, Dynamics, Receptor Binding, and Antibody Binding of the Fully Glycosylated Full-Length SARS-CoV-2 Spike Protein in a Viral Membrane.J Chem Theory Comput2021
34529436Dynamic Interactions of Fully Glycosylated SARS-CoV-2 Spike Protein with Various Antibodies.J Chem Theory Comput2021
34462960Modeling SARS-CoV-2 proteins in the CASP-commons experiment.Proteins2021
34693166MOLGENGO: Finding Novel Molecules with Desired Electronic Properties by Capitalizing on Their Global Optimization.ACS Omega2021
34486824Discovery of a transdermally deliverable pentapeptide for activating AdipoR1 to promote hair growth.EMBO Mol Med2021
33938216GalaxyWater-wKGB: Prediction of Water Positions on Protein Structure Using wKGB Statistical Potential.J Chem Inf Model2021
34324227Assessment of protein model structure accuracy estimation in CASP14: Old and new challenges.Proteins2021
34013268Dynamic Interactions of Fully Glycosylated SARS-CoV-2 Spike Protein with Various Antibodies.bioRxiv2021
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Collaborators

Lim Heo
Michigan State University
Co-authored papers 21
Hahnbeom Park
Co-authored papers 19
Minkyung Baek
Seoul National University
Co-authored papers 17
Hasup Lee
Seoul National University
Co-authored papers 16
Taeyong Park
Co-authored papers 14
Gyu Rie Lee
University of Washington
Co-authored papers 14
Junsu Ko
Co-authored papers 8
Woong-Hee Shin
Co-authored papers 8
Shoshana J Wodak
VIB-VUB Center for Structural Biology
Co-authored papers 6
Zhiping Weng
University of Massachusetts Medical School
Co-authored papers 5
Paul A Bates
The Francis Crick Institute
Co-authored papers 5
Juan Fern??ndez-Recio
Instituto de Ciencias de la Vid y del Vino (ICVV-CSIC)
Co-authored papers 5
Alexandre M J J Bonvin
Bijvoet Center for Biomolecular Research, Utrecht University
Co-authored papers 5
Sheng-You Huang
Huazhong University of Science and Technology
Co-authored papers 5
Brian G Pierce
University of Maryland Institute for Bioscience and Biotechnology Research
Co-authored papers 5
Thom Vreven
Visterra Inc.
Co-authored papers 5
Xiaoqin Zou
Dalton Cardiovascular Research Center, University of Missouri
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Iain H Moal
GSK Medicines Research Centre
Co-authored papers 5
Panagiotis L Kastritis
Interdisciplinary Research Center HALOmem, Martin Luther University Halle-Wittenberg
Co-authored papers 4
Sergei Grudinin
University Grenoble Alpes, CNRS
Co-authored papers 4
Dima Kozakov
Stony Brook University
Co-authored papers 4
Sandor Vajda
Boston University
Co-authored papers 4
Sanbo Qin
University of Illinois at Chicago
Co-authored papers 4
Marc F Lensink
University Lille, CNRS
Co-authored papers 4
Jeffrey J Gray
Johns Hopkins University
Co-authored papers 4
Sameer Velankar
European Bioinformatics Institute
Co-authored papers 4
Huan-Xiang Zhou
University of Illinois Chicago
Co-authored papers 4
Daisuke Kihara
Purdue University
Co-authored papers 4
Brian Jim??nez-Garc??a
Utrecht University
Co-authored papers 4
Jooyoung Lee
Korea Institute for Advanced Study
Co-authored papers 4
Release 1.2