Author details

Full Name

Andres Ramos

Affiliation

Institute of Structural and Molecular Biology (ISMB), University College London

ORCID

Career Start Year

1997

Papers

H Index

Expertise

CM4AI Collaborator

Andrej Sali (CM4AI)

PMID	Paper Title	Journal Title	Published Year
37426752	Affinity-enhanced RNA-binding domains as tools to understand RNA recognition.	Cell Rep Methods	2023
34719327	The distinct RNA-interaction modes of a small ZnF domain underlay TUT4(7) diverse action in miRNA regulation.	RNA Biol	2021
33877607	Biolayer Interferometry: Protein-RNA Interactions.	Methods Mol Biol	2021
30864660	IMP1 KH1 and KH2 domains create a structural platform with unique RNA recognition and re-modelling properties.	Nucleic Acids Res	2019
31862888	Structural basis for Fullerene geometry in a human endogenous retrovirus capsid.	Nat Commun	2019
31075098	Cyclic AMP signalling controls key components of malaria parasite host cell invasion machinery.	PLoS Biol	2019
29483512	A cryptic RNA-binding domain mediates Syncrip recognition and exosomal partitioning of miRNA targets.	Nat Commun	2018
29856909	Joining the dots - protein-RNA interactions mediating local mRNA translation in neurons.	FEBS Lett	2018
29897600	The structure of the RbBP5 Î²-propeller domain reveals a surface with potential nucleic acid binding sites.	Nucleic Acids Res	2018
27881476	Lin28a uses distinct mechanisms of binding to RNA and affects miRNA levels positively and negatively.	RNA	2017
28379442	An RRM-ZnF RNA recognition module targets RBM10 to exonic sequences to promote exon exclusion.	Nucleic Acids Res	2017
28147274	Mechanism of Î²-actin mRNA Recognition by ZBP1.	Cell Rep	2017
29150526	The devil is in the domain: understanding protein recognition of multiple RNA targets.	Biochem Soc Trans	2017
29074846	A method for the unbiased and efficient segmental labelling of RNA-binding proteins for structure and biophysics.	Sci Rep	2017
27109776	Two-Dimensional NMR Lineshape Analysis.	Sci Rep	2016
27829070	Structure of a Spumaretrovirus Gag Central Domain Reveals an Ancient Retroviral Capsid.	PLoS Pathog	2016
25586222	Protein-RNA specificity by high-throughput principal component analysis of NMR spectra.	Nucleic Acids Res	2015
25625331	KH-RNA interactions: back in the groove.	Curr Opin Struct Biol	2015
24845017	KSRP controls pleiotropic cellular functions.	Semin Cell Dev Biol	2014
25385579	H19 long noncoding RNA controls the mRNA decay promoting function of KSRP.	Proc Natl Acad Sci U S A	2014
25110032	PolyQ-mediated regulation of mRNA granules assembly.	Biochem Soc Trans	2014
23178464	Functional and molecular insights into KSRP function in mRNA decay.	Biochim Biophys Acta	2013
23863145	Terminal loop-mediated regulation of miRNA biogenesis: selectivity and mechanisms.	Biochem Soc Trans	2013
23749994	Antimalarial activity of cupredoxins: the interaction of Plasmodium merozoite surface protein 119 (MSP119) and rusticyanin.	J Biol Chem	2013
22547390	KH domains with impaired nucleic acid binding as a tool for functional analysis.	Nucleic Acids Res	2012
22955930	In support of the BMRB.	Nat Struct Mol Biol	2012
23142982	Noncanonical G recognition mediates KSRP regulation of let-7 biogenesis.	Nat Struct Mol Biol	2012
21196264	KSRP, many functions for a single protein.	Front Biosci (Landmark Ed)	2011
22027593	Selective inhibition of microRNA accessibility by RBM38 is required for p53 activity.	Nat Commun	2011
21755471	KSRP Promotes the Maturation of a Group of miRNA Precuresors.	Adv Exp Med Biol	2011
21472430	Modular protein-RNA interactions regulating mRNA metabolism: a role for NMR.	Eur Biophys J	2011
20097654	Structure of the Rna15 RRM-RNA complex reveals the molecular basis of GU specificity in transcriptional 3'-end processing factors.	Nucleic Acids Res	2010
21935887	The role of KSRP in mRNA decay and microRNA precursor maturation.	Wiley Interdiscip Rev RNA	2010
21627028	KSRP promotes the maturation of a group of miRNA precursors.	Adv Exp Med Biol	2010
20711187	Molecular basis of FIR-mediated c-myc transcriptional control.	Nat Struct Mol Biol	2010
20541937	Building RNA-protein granules: insight from the germline.	Trends Cell Biol	2010
20223209	Creating a twin STAR.	Structure	2010
20385598	Orientation of the central domains of KSRP and its implications for the interaction with the RNA targets.	Nucleic Acids Res	2010
19198587	Phosphorylation-mediated unfolding of a KH domain regulates KSRP localization via 14-3-3 binding.	Nat Struct Mol Biol	2009
19875945	How to control miRNA maturation?	RNA Biol	2009
19458619	The RNA-binding protein KSRP promotes the biogenesis of a subset of microRNAs.	Nature	2009
18684992	The sequence selectivity of KSRP explains its flexibility in the recognition of the RNA targets.	Nucleic Acids Res	2008
17437720	The structure of the C-terminal KH domains of KSRP reveals a noncanonical motif important for mRNA degradation.	Structure	2007
18058552	Structural insight into the hTERT intron 6 sequence d(GGGGTGAAAGGGG) from 1H-NMR study.	Nucleosides Nucleotides Nucleic Acids	2007
17655233	Scaffold-independent analysis of RNA-protein interactions: the Nova-1 KH3-RNA complex.	J Am Chem Soc	2007
16497660	RNA polymerase II CTD phosphopeptides compete with RNA for the interaction with Pcf11.	RNA	2006
16971472	The role of Tudor domains in germline development and polar granule architecture.	Development	2006
16407062	The structure of the N-terminal domain of the fragile X mental retardation protein: a platform for protein-protein interaction.	Structure	2006
15665873	Key features of the interaction between Pcf11 CID and RNA polymerase II CTD.	Nat Struct Mol Biol	2005
15929005	Backbone assignment of PCF11 CTD binding domain.	J Biomol NMR	2005

1 - 50 of 64

Dimitrios G Anastasakis

National Institute for Arthritis and Musculoskeletal and Skin Disease

Career Start Year 2009

Number of shared co-authors 0

Katerina Bendak

Children's Cancer Institute, Lowy Cancer Research Centre, School of Clinical Medicine

Career Start Year 2009

Number of shared co-authors 0

Markus Hafner

National Institute of Arthritis and Musculoskeletal and Skin Diseases

Career Start Year 2006

Number of shared co-authors 0

Gene W Yeo

University of California

Career Start Year 2004

Number of shared co-authors 2

Yufeng Tong

University of Windsor

Career Start Year 2002

Number of shared co-authors 0

Ludivine Wacheul

Universite libre de Bruxelles (ULB)

Career Start Year 2001

Number of shared co-authors 0

Rhiju Das

Stanford University School of Medicine

Career Start Year 2001

Number of shared co-authors 3

Stephen N Floor

University of California san francisco

Career Start Year 2001

Number of shared co-authors 3

Beata Szabo

Institute of Enzymology, HUN-REN Research Centre for Natural Sciences

Career Start Year 2000

Number of shared co-authors 0

Guillaume M Hautbergue

Sheffield Institute for Translational Neuroscience (SITraN), University of Sheffield

Career Start Year 1999

Number of shared co-authors 3

Agnes Tantos

Institute of Enzymology, HUN-REN Research Centre for Natural Sciences

Career Start Year 1999

Number of shared co-authors 0

May Khanna

College of Dentistry, New York University

Career Start Year 1999

Number of shared co-authors 2

Takashi Nagata

Institute of Advanced Energy, Kyoto University

Career Start Year 1996

Number of shared co-authors 3

Yun Bai

Carnegie Institution for Science

Career Start Year 1996

Number of shared co-authors 1

John D Gross

Department of Pharmaceutical Chemistry, University of California san francisco

Career Start Year 1995

Number of shared co-authors 4

Erica Y Jacobs

The Rockefeller University, St John's University

Career Start Year 1994

Number of shared co-authors 1

Christopher D Lima

Howard Hughes Medical Institute, Memorial Sloan Kettering Cancer Center

Career Start Year 1993

Number of shared co-authors 1

Yunyu Shi

University of Science & Technology of China

Career Start Year 1993

Number of shared co-authors 2

Patrick Gendron

University of Montreal

Career Start Year 1992

Number of shared co-authors 0

Milton H Werner

Inhibikase Therapeutics Inc.

Career Start Year 1991

Number of shared co-authors 3

Cheryl H Arrowsmith

University of Toronto

Career Start Year 1989

Number of shared co-authors 17

Anna Marie Pyle

Yale University, USA Howard Hughes Medical Institute

Career Start Year 1989

Number of shared co-authors 0

Jennifer A Doudna

Innovative Genomics Institute, University of California berkeley

Career Start Year 1987

Number of shared co-authors 3

Karla M Neugebauer

Yale University

Career Start Year 1985

Number of shared co-authors 2

Opher Gileadi

Structural Genomics Consortium Karolinska Institute Stockholm Sweden.

Career Start Year 1984

Number of shared co-authors 3

Stephen K Burley

The State University of New Jersey

Career Start Year 1982

Number of shared co-authors 8

Angus I Lamond

University of Dundee

Career Start Year 1982

Number of shared co-authors 0

Henning Urlaub

Max Planck Institute for Multidisciplinary Sciences

Career Start Year 1982

Number of shared co-authors 5

Alan D Frankel

University of California san francisco

Career Start Year 1980

Number of shared co-authors 4

Alain Laederach

University of North Carolina at Chapel Hill

Career Start Year 1972

Number of shared co-authors 1

row(s) 1 - 30 of 30

Thomas A Frenkiel

The Medical Research Council Biomedical NMR Centre, The Francis Crick Institute

Co-authored papers 5

Michael G Rosenfeld

University of California San Diego

Co-authored papers 4

Alexey L Arkov

Co-authored papers 2

Peter B Rosenthal

The Francis Crick Institute

Co-authored papers 2

Andrej Sali (CM4AI)

University of California San Francisco

Co-authored papers 1

Michael R Gryk

University of Illinois

Co-authored papers 1

Walter J Chazin

and Center for Structural Biology, Vanderbilt University

Co-authored papers 1

Bernd Reif

Technische Universitat Munchen (TUM)

Co-authored papers 1

Matthew P Crump

University of Bristol

Co-authored papers 1

Alexander P Golovanov

The University of Manchester

Co-authored papers 1

David A Case

Rutgers University

Co-authored papers 1

Oliver F Lange

Center for Integrated Protein Science, Technische Universitat Munchen

Co-authored papers 1

Gordon C K Roberts

Leicester Institute of Structural and Chemical Biology, University of Leicester

Co-authored papers 1

Josep Rizo

University of Texas Southwestern Medical Center

Co-authored papers 1

Mike P Williamson

The University of Sheffield

Co-authored papers 1

Lu-Yun Lian

Institute of Systems, The University of Liverpool

Co-authored papers 1

Igor L Barsukov

Institute of Integrative Biology, University of Liverpool

Co-authored papers 1

David E Shaw

Columbia University

Co-authored papers 1

Ad Bax

National Institutes of Health

Co-authored papers 1

Patrick C A van der Wel

Zernike Institute for Advanced Materials, University of Groningen

Co-authored papers 1

David Middleton

Co-authored papers 1

Ioannis Vakonakis

University of Oxford

Co-authored papers 1

John Christodoulou

University of Melbourne, The Royal Children's Hospital

Co-authored papers 1

Ernest D Laue

University of Cambridge

Co-authored papers 1

Gordon S Rule

Carnegie Mellon University

Co-authored papers 1

Stephen Matthews

Imperial College London

Co-authored papers 1

Chien Ho

Carnegie Mellon University

Co-authored papers 1

Toshimichi Fujiwara

Institute for Protein Research, Osaka University

Co-authored papers 1

Pei Tang

Sichuan University

Co-authored papers 1

Joern Werner

Co-authored papers 1

1 - 30

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