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Author Details

Kristoffer Vitting-Seerup
Technical University of Denmark
2014
31
18
PMIDPaper TitleJournal TitlePublished Year
36794762The HOPX and BLBP landscape and gliogenic regions in developing human brain.J Anat2023
37858135Expression and splicing mediate distinct biological signals.BMC Biol2023
37745975Most protein domains exist as variants with distinct functions across cells, tissues and diseases.NAR Genom Bioinform2023
35608632Non-metabolic functions of phosphofructokinase-1 orchestrate tumor cellular invasion and genome maintenance under bevacizumab therapy.Neuro Oncol2023
36255229Progression of the pluripotent epiblast depends upon the NMD factor UPF2.Development2022
35545054PTBP1 promotes hematopoietic stem cell maintenance and red blood cell development by ensuring sufficient availability of ribosomal constituents.Cell Rep2022
35517855Editorial: Alternative Splicing in Health and Disease.Front Mol Biosci2022
35919495Target isoforms are an overlooked challenge and opportunity in chimeric antigen receptor cell therapy.Immunother Adv2022
33023892The RNA m6A Reader YTHDF2 Maintains Oncogene Expression and Is a Targetable Dependency in Glioblastoma Stem Cells.Cancer Discov2021
33779510Perspective: targeting VEGF-A and YKL-40 in glioblastoma - matter matters.Cell Cycle2021
34286278Plasma IL-8 and ICOSLG as prognostic biomarkers in glioblastoma.Neurooncol Adv2021
33274667Personalized B cell response to the <i>Lactobacillus rhamnosus GG</i> probiotic in healthy human subjects: a randomized trial.Gut Microbes2020
30901080Astrogliogenesis in human fetal brain: complex spatiotemporal immunoreactivity patterns of GFAP, S100, AQP4 and YKL-40.J Anat2019
31722198A Functional Link between Nuclear RNA Decay and Transcriptional Control Mediated by the Polycomb Repressive Complex 2.Cell Rep2019
31585526CAGEfightR: analysis of 5'-end data using R/Bioconductor.BMC Bioinformatics2019
31309149Mutant CEBPA directly drives the expression of the targetable tumor-promoting factor CD73 in AML.Sci Adv2019
30989184IsoformSwitchAnalyzeR: analysis of changes in genome-wide patterns of alternative splicing and its functional consequences.Bioinformatics2019
29311636Loss-of-function variants in ADCY3 increase risk of obesity and type 2 diabetes.Nat Genet2018
29360266Targeting glioma stem-like cell survival and chemoresistance through inhibition of lysine-specific histone demethylase KDM2B.Mol Oncol2018
29695774Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies.Nat Commun2018
28584021The Landscape of Isoform Switches in Human Cancers.Mol Cancer Res2017
28420326Transcriptional changes induced by bevacizumab combination therapy in responding and non-responding recurrent glioblastoma patients.BMC Cancer2017
28345861Identification of Gene Transcription Start Sites and Enhancers Responding to Pulmonary Carbon Nanotube Exposure in Vivo.ACS Nano2017
28829439An integrated expression atlas of miRNAs and their promoters in human and mouse.Nat Biotechnol2017
27149259UPF2-Dependent Nonsense-Mediated mRNA Decay Pathway Is Essential for Spermatogenesis by Selectively Eliminating Longer 3'UTR Transcripts.PLoS Genet2016
28025337On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase.Database (Oxford)2016
27871484Identification of a Nuclear Exosome Decay Pathway for Processed Transcripts.Mol Cell2016
25678556Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells.Science2015
25652644Amplification of pico-scale DNA mediated by bacterial carrier DNA for small-cell-number transcription factor ChIP-seq.BMC Genomics2015
24655717spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data.BMC Bioinformatics2014
25092792UBL5 is essential for pre-mRNA splicing and sister chromatid cohesion in human cells.EMBO Rep2014
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Collaborators

Albin Sandelin
University of Copenhagen
Co-authored papers 12
Robin Andersson
University of Copenhagen
Co-authored papers 6
Yun Chen
Hospital of Obstetrics and Gynecology, Fudan University
Co-authored papers 5
Jette Bornholdt
University of Copenhagen
Co-authored papers 4
Morana Vitezic
University of Copenhagen
Co-authored papers 4
Berit Lilje
Statens Serum Institut
Co-authored papers 3
Yoshihide Hayashizaki
Center for Integrative Medical Sciences
Co-authored papers 3
Mette Boyd
University of Copenhagen
Co-authored papers 3
Dave S B Hoon
Saint John's Cancer Institute at Saint John's Health Center
Co-authored papers 3
Timo Lassmann
Telethon Kids Institute, University of Western Australia
Co-authored papers 3
Piero Carninci
RIKEN Center for Integrative Medical Sciences
Co-authored papers 3
Nicolas Rapin
Rigshospitalet, University of Copenhagen
Co-authored papers 3
Hideya Kawaji
RIKEN Center for Integrative Medical Sciences
Co-authored papers 3
Alistair R R Forrest
RIKEN Center for Integrative Medical Sciences
Co-authored papers 3
Peter Zhang
Child and Family Research Institute, University of British Columbia
Co-authored papers 2
Hiroki Sato
Institute of Industrial Science, The University of Tokyo
Co-authored papers 2
Nicolas Bertin
University Bordeaux, CNRS
Co-authored papers 2
Peter Arner
Karolinska Institutet at Karolinska Hospital-Huddinge
Co-authored papers 2
Takeya Kasukawa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 2
Jeremy N Rich
UPMC Hillman Cancer Center, University of Pittsburgh Medical Center
Co-authored papers 2
Kim M Summers
Mater Research Institute-University of Queensland, Translational Research Institute
Co-authored papers 2
Marina Lizio
Cerevance Ltd
Co-authored papers 2
Yuri Ishizu
RIKEN Center for Life Science Technologies
Co-authored papers 2
Jayson Harshbarger
RIKEN Center for Integrative Medical Sciences
Co-authored papers 2
Misako Yoneda
Institute of Industrial Science, The University of Tokyo
Co-authored papers 2
Svend Peter Klinken
Harry Perkins Institute of Medical Research
Co-authored papers 2
Akira Hasegawa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 2
Dan Goldowitz
University of British Columbia
Co-authored papers 2
Carsten O Daub
International Institute of Molecular and Cell Biology in Warsaw
Co-authored papers 2
Michael Detmar
Institute of Pharmaceutical Sciences, ETH Zurich
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