Author details

Full Name

Davide Degli Esposti

Affiliation

ORCID

Career Start Year

2006

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37329916	Dynamic Multiple Reaction Monitoring of amphipod Gammarus fossarum caeca expands molecular information for understanding the impact of contaminants.	Sci Total Environ	2023
36113334	Development of a multi-omics extraction method for ecotoxicology: investigation of the reproductive cycle of Gammarus fossarum.	Talanta	2023
37567286	Acclimation and transgenerational plasticity support increased cadmium tolerance in Gammarus populations exposed to natural metal contamination in headwater streams.	Sci Total Environ	2023
35051048	From Extrapolation to Precision Chemical Hazard Assessment: The Ecdysone Receptor Case Study.	Toxics	2021
34283579	Subcellular Distribution of Dietary Methyl-Mercury in <i>Gammarus fossarum</i> and Its Impact on the Amphipod Proteome.	Environ Sci Technol	2021
33838495	Co-expression network analysis identifies novel molecular pathways associated with cadmium and pyriproxyfen testicular toxicity in Gammarus fossarum.	Aquat Toxicol	2021
34208581	Upper Aerodigestive Tract Squamous Cell Carcinomas Show Distinct Overall DNA Methylation Profiles and Different Molecular Mechanisms behind WNT Signaling Disruption.	Cancers	2021
33615205	Shotgun lipidomics and mass spectrometry imaging unveil diversity and dynamics in <i>Gammarus fossarum</i> lipid composition.	iScience	2021
34298834	HPV Infection Leaves a DNA Methylation Signature in Oropharyngeal Cancer Affecting Both Coding Genes and Transposable Elements.	Cancers	2021
32504001	Combining proteogenomics and metaproteomics for deep taxonomic and functional characterization of microbiomes from a non-sequenced host.	NPJ Biofilms Microbiomes	2020
32249536	Proteogenomics-Guided Evaluation of RNA-Seq Assembly and Protein Database Construction for Emergent Model Organisms.	Proteomics	2020
32630258	A "Population Dynamics" Perspective on the Delayed Life-History Effects of Environmental Contaminations: An Illustration with a Preliminary Study of Cadmium Transgenerational Effects over Three Generations in the Crustacean <i>Gammarus</i>.	Int J Mol Sci	2020
32567158	In situ isobaric lipid mapping by MALDI-ion mobility separation-mass spectrometry imaging.	J Mass Spectrom	2020
32668291	High-multiplexed monitoring of protein biomarkers in the sentinel Gammarus fossarum by targeted scout-MRM assay, a new vision for ecotoxicoproteomics.	J Proteomics	2020
30718669	The methylome of the celiac intestinal epithelium harbours genotype-independent alterations in the HLA region.	Scientific Reports	2019
31687451	Shotgun proteomics datasets acquired on <i>Gammarus pulex</i> animals sampled from the wild.	Data Brief	2019
31562330	De novo transcriptomes of 14 gammarid individuals for proteogenomic analysis of seven taxonomic groups.	Sci Data	2019
31557464	In vitro transformation of primary human hepatocytes: Epigenetic changes and stemness properties.	Experimental Cell Research	2019
30529745	Ecotoxicoproteomics: A decade of progress in our understanding of anthropogenic impact on the environment.	J Proteomics	2019
31133674	Co-expression network analysis identifies gonad- and embryo-associated protein modules in the sentinel species Gammarus fossarum.	Sci Rep	2019
31352074	Comparative proteomics in the wild: Accounting for intrapopulation variability improves describing proteome response in a Gammarus pulex field population exposed to cadmium.	Aquat Toxicol	2019
29574700	Genome-wide profiling of normal gastric mucosa identifies Helicobacter pylori- and cancer-associated DNA methylome changes.	International Journal of Cancer	2018
28836271	Roadmap for investigating epigenome deregulation and environmental origins of cancer.	Int J Cancer	2018
29969672	A transcriptomic analysis of black cohosh: Actein alters cholesterol biosynthesis pathways and synergizes with simvastatin.	Food and Chemical Toxicology	2018
29491422	Identification, expression, and endocrine-disruption of three ecdysone-responsive genes in the sentinel species Gammarus fossarum.	Sci Rep	2018
29138345	Novel Predictors of Breast Cancer Survival Derived from miRNA Activity Analysis.	Clin Cancer Res	2018
29604052	Filling the gap between chemical carcinogenesis and the hallmarks of cancer: A temporal perspective.	European Journal of Clinical Investigation	2018
29735783	Antiproliferative Effects of Epigenetic Modifier Drugs Through E-cadherin Up-regulation in Liver Cancer Cell Lines.	Annals of Hepatology	2018
29162888	miR-500a-5p regulates oxidative stress response genes in breast cancer and predicts cancer survival.	Sci Rep	2017
28381277	Unique DNA methylation signature in HPV-positive head and neck squamous cell carcinomas.	Genome Medicine	2017
28333958	Targeted deep sequencing of plasma circulating cell-free DNA reveals Vimentin and Fibulin 1 as potential epigenetic biomarkers for hepatocellular carcinoma.	PLoS ONE	2017
29099283	Lowly methylated region analysis identifies EBF1 as a potential epigenetic modifier in breast cancer.	Epigenetics	2017
26887054	Identification of novel long non-coding RNAs deregulated in hepatocellular carcinoma using RNA-sequencing.	Oncotarget	2016
25856406	Ischemic Postconditioning of the Liver Graft in Adult Liver Transplantation.	Transplantation	2015
25755686	Aberrant DNA methylation of imprinted loci in hepatocellular carcinoma and after in vitro exposure to common risk factors.	Clinical Epigenetics	2015
24464223	The protein disulfide isomerases PDIA4 and PDIA6 mediate resistance to cisplatin-induced cell death in lung adenocarcinoma.	Cell Death and Differentiation	2014
22814966	Glycogen synthase kinase 3-mediated voltage-dependent anion channel phosphorylation controls outer mitochondrial membrane permeability during lipid accumulation.	Hepatology	2013
22122481	Non-alcoholic steatohepatitis: new insights from OMICS studies.	Current Pharmaceutical Biotechnology	2012
22745910	Mitochondrial roles and cytoprotection in chronic liver injury.	Biochemistry Research International	2012
22213284	Chemopreventive potential of black cohosh on breast cancer in Sprague-Dawley rats.	Anticancer Research	2012
22198559	Pharmacological mechanisms of black cohosh in Sprague-Dawley rats.	Fitoterapia	2012
22173152	Twenty-year protocol liver biopsies: Invasive but useful for the management of liver recipients.	Journal of Hepatology	2012
21710254	Withaferin A induces apoptosis in human melanoma cells through generation of reactive oxygen species and down-regulation of Bcl-2.	Apoptosis	2011
21368883	Ischemic preconditioning induces autophagy and limits necrosis in human recipients of fatty liver grafts, decreasing the incidence of rejection episodes.	Cell Death and Disease	2011
20009565	Autophagy is induced by ischemic preconditioning in human livers formerly treated by chemotherapy to limit necrosis.		2010
20815852	Ischaemic preconditioning of the graft in adult living related right lobe liver transplantation: impact on ischaemia-reperfusion injury and clinical relevance.	HPB	2010
19765849	Concurrent induction of necrosis, apoptosis, and autophagy in ischemic preconditioned human livers formerly treated by chemotherapy.	Journal of Hepatology	2009
19527300	Actein activates stress- and statin-associated responses and is bioavailable in Sprague-Dawley rats.	Fundamental and Clinical Pharmacology	2009
18226064	Consequences of exposure to carcinogens beginning during developmental life.	Basic and Clinical Pharmacology and Toxicology	2008
17805418	Life-span exposure to low doses of aspartame beginning during prenatal life increases cancer effects in rats.	Environmental Health Perspectives	2007