Author details

Full Name

Tatyana Goldberg

Affiliation

TUM (Technical University of Munich) Department of Informatics

ORCID

Career Start Year

2012

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
33999203	PredictProtein - Predicting Protein Structure and Function for 29 Years.	Nucleic Acids Res	2021
34328525	Spectrum of Protein Location in Proteomes Captures Evolutionary Relationship Between Species.	J Mol Evol	2021
32150354	Visualizing Human Protein-Protein Interactions and Subcellular Localizations on Cell Images Through CellMap.	Curr Protoc Bioinformatics	2020
30561851	Combining multimodal imaging and treatment features improves machine learning-based prognostic assessment in patients with glioblastoma multiforme.	Cancer Med	2019
31861997	Correction to: Detailed prediction of protein sub-nuclear localization.	BMC Bioinformatics	2019
31744546	The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.	Genome Biol	2019
31014229	Detailed prediction of protein sub-nuclear localization.	BMC Bioinformatics	2019
29343218	LocText: relation extraction of protein localizations to assist database curation.	BMC Bioinformatics	2018
29728226	Radiomics in radiooncology - Challenging the medical physicist.	Phys Med	2018
29557486	Treatment-related features improve machine learning prediction of prognosis in soft tissue sarcoma patients.	Strahlenther Onkol	2018
29106588	NLSdb-major update for database of nuclear localization signals and nuclear export signals.	Nucleic Acids Res	2018
28902868	Discovery of numerous novel small genes in the intergenic regions of the Escherichia coli O157:H7 Sakai genome.	PLoS One	2017
28618195	Novel reductive dehalogenases from the marine sponge associated bacterium Desulfoluna spongiiphila.	Environ Microbiol Rep	2017
26911138	Translatomics combined with transcriptomics and proteomics reveals novel functional, recently evolved orphan genes in Escherichia coli O157:H7 (EHEC).	BMC Genomics	2016
26538599	Tools and data services registry: a community effort to document bioinformatics resources.	Nucleic Acids Res	2016
27604469	An expanded evaluation of protein function prediction methods shows an improvement in accuracy.	Genome Biol	2016
27713481	Computational prediction shines light on type III secretion origins.	Sci Rep	2016
27412096	MSAViewer: interactive JavaScript visualization of multiple sequence alignments.	Bioinformatics	2016
26862012	Corrigendum: A draft network of ligand-receptor-mediated multicellular signalling in human.	Nat Commun	2016
25991687	A Combined Omics Approach to Generate the Surface Atlas of Human Naive CD4+ T Cells during Early T-Cell Receptor Activation.	Mol Cell Proteomics	2015
26673203	Protein disorder reduced in Saccharomyces cerevisiae to survive heat shock.	F1000Res	2015
26153621	Anatomy of BioJS, an open source community for the life sciences.	Elife	2015
24848019	LocTree3 prediction of localization.	Nucleic Acids Res	2014
25476999	Evaluation and integration of functional annotation pipelines for newly sequenced organisms: the potato genome as a test case.	BMC Plant Biol	2014
25458812	LocFuse: human protein-protein interaction prediction via classifier fusion using protein localization information.	Genomics	2014
25075290	BioJS: an open source standard for biological visualisation - its status in 2014.	F1000Res	2014
24799431	PredictProtein--an open resource for online prediction of protein structural and functional features.	Nucleic Acids Res	2014
23825697	Accelerating the Original Profile Kernel.	PLoS One	2013
22962467	LocTree2 predicts localization for all domains of life.	Bioinformatics	2012

1 - 29 of 29

Ulrich Omasits

CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences

Career Start Year 2008

Number of shared co-authors 0

Kenichiro Imai

Cellular and Molecular Biotechnology Research Institute

Career Start Year 2005

Number of shared co-authors 4

Vera van Noort

Leiden University, Institute of Biology Leiden

Career Start Year 2003

Number of shared co-authors 1

Ying Xu

The China-Japan Union Hospital, Jilin University

Career Start Year 2002

Number of shared co-authors 0

Dmitry Korkin

Worcester Polytechnic Institute

Career Start Year 2002

Number of shared co-authors 1

Dariusz Przybylski

Howard Hughes Medical Institute, Brandeis University

Career Start Year 2001

Number of shared co-authors 2

Oliver Kohlbacher

Max Planck Institute for Developmental Biology

Career Start Year 2000

Number of shared co-authors 8

Olof Emanuelsson

KTH Royal Institute of Technology

Career Start Year 1999

Number of shared co-authors 4

Dong Xu

University of Missouri

Career Start Year 1998

Number of shared co-authors 8

Fabien Campagne

Weill Cornell Medical College

Career Start Year 1998

Number of shared co-authors 0

Patrick Aloy

Institucio Catalana de Recerca i Estudis Avancats (ICREA)

Career Start Year 1997

Number of shared co-authors 6

Florencio Pazos

National Centre for Biotechnology (CNB-CSIC)

Career Start Year 1997

Number of shared co-authors 7

J Lynn Fink

The University of Queensland Diamantina Institute, The University of Queensland

Career Start Year 1997

Number of shared co-authors 8

Ralf Zimmer

Ludwig-Maximilians-Universitat Munchen

Career Start Year 1995

Number of shared co-authors 2

Alex Bateman

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 1995

Number of shared co-authors 30

John-Marc Chandonia

Lawrence Berkeley National Laboratory

Career Start Year 1995

Number of shared co-authors 4

Ioannis Xenarios

University of Lausanne

Career Start Year 1994

Number of shared co-authors 34

Bonnie Berger

Massachusetts Institute of Technology

Career Start Year 1994

Number of shared co-authors 9

Jason E McDermott

Pacific Northwest National Laboratory

Career Start Year 1993

Number of shared co-authors 1

Edward M Marcotte

University of Texas

Career Start Year 1993

Number of shared co-authors 7

Bianca Habermann

Aix Marseille University, CNRS, Turing Center for Living Systems

Career Start Year 1993

Number of shared co-authors 3

Cathy H Wu

Georgetown University Medical Center

Career Start Year 1992

Number of shared co-authors 20

Martijn A Huynen

Radboud University Medical Centre Nijmegen

Career Start Year 1992

Number of shared co-authors 7

Erik L L Sonnhammer

Stockholm University

Career Start Year 1992

Number of shared co-authors 12

Paul D Thomas

University of Southern California

Career Start Year 1991

Number of shared co-authors 35

Mark Gerstein

Yale University

Career Start Year 1991

Number of shared co-authors 17

Robert B Russell

Heidelberg University

Career Start Year 1991

Number of shared co-authors 3

Peer Bork

University of Wurzburg

Career Start Year 1989

Number of shared co-authors 33

Adam Godzik

University of California Riverside

Career Start Year 1987

Number of shared co-authors 21

Shoba Ranganathan

Macquarie University

Career Start Year 1972

Number of shared co-authors 6

row(s) 1 - 30 of 30

Burkhard Rost

Technical University of Munich (TUM)

Co-authored papers 24

Ian Sillitoe

University College London

Co-authored papers 5

Tobias Hamp

Inc. San Diego

Co-authored papers 5

Yana Bromberg

Rutgers University

Co-authored papers 4

Giuseppe Profiti

University of Bologna

Co-authored papers 3

Silvio C E Tosatto

University of Padova

Co-authored papers 3

Edda Kloppmann

Institute for Advanced Study (TUM-IAS), TUM (Technische Universitat Munchen)

Co-authored papers 3

Suzanna E Lewis

Lawrence Berkeley National Laboratory

Co-authored papers 3

Tunca Do??an

Hacettepe University

Co-authored papers 3

Rita Casadio

Department of Pharmacy and Biotechnology, University of Bologna

Co-authored papers 3

Jose M Villaveces

Co-authored papers 2

Filip Ginter

University of Turku

Co-authored papers 2

Steven E Brenner

University of California berkeley

Co-authored papers 2

Jonas Reeb

AbbVie Deutschland GmbH & Co. KG

Co-authored papers 2

Leyla Garcia

European Bioinformatics Institute

Co-authored papers 2

Jos?? M Fern??ndez

Hospital Universitario y Politecnico la Fe

Co-authored papers 2

Renzhi Cao

Pacific Lutheran University

Co-authored papers 2

Indika Kahanda

University of North Florida

Co-authored papers 2

Sayoni Das

University College London

Co-authored papers 2

Chris Sander

Broad Institute of MIT and Harvard

Co-authored papers 2

Matteo Re

Universita degli Studi di Milano

Co-authored papers 2

Alfredo Benso

Italy Consorzio Interuniversitario Nazionale per l'Informatica

Co-authored papers 2

Reinhard Schneider

Co-authored papers 2

Benedikt Wiestler

Technical University

Co-authored papers 2

Kai Hakala

University of Turku

Co-authored papers 2

Christophe Dessimoz

University of Lausanne

Co-authored papers 2

Domenico Cozzetto

Imperial College London

Co-authored papers 2

Maria J Martin

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 2

Marco Mesiti

Universita degli Studi di Milano

Co-authored papers 2

Prajwal Bhat

Royal Holloway University of London

Co-authored papers 2

1 - 30

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