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Author Details

Kalpana Raja
Morgridge Institute for Research
1997
37
12
PMIDPaper TitleJournal TitlePublished Year
36935011Representing and utilizing clinical textual data for real world studies: An OHDSI approach.J Biomed Inform2023
37915001Serial KinderMiner (SKiM) discovers and annotates biomedical knowledge using co-occurrence and transformer models.BMC Bioinformatics2023
36935011Representing and utilizing clinical textual data for real world studies: An OHDSI approach.J Biomed Inform2023
37915001Serial KinderMiner (SKiM) discovers and annotates biomedical knowledge using co-occurrence and transformer models.BMC Bioinformatics2023
36010264Integrated Approaches to Identify miRNA Biomarkers Associated with Cognitive Dysfunction in Multiple Sclerosis Using Text Mining, Gene Expression, Pathways, and GWAS.Diagnostics (Basel)2022
35713870Extracting Significant Comorbid Diseases from MeSH Index of PubMed.Methods Mol Biol2022
35713869A Text Mining Protocol for Extracting Drug-Drug Interaction and Adverse Drug Reactions Specific to Patient Population, Pharmacokinetics, Pharmacodynamics, and Disease.Methods Mol Biol2022
35713868A Text Mining Protocol for Predicting Drug-Drug Interaction and Adverse Drug Reactions from PubMed Articles.Methods Mol Biol2022
35713861A Simple Computational Approach to Identify Potential Drugs for Multiple Sclerosis and Cognitive Disorders from Expert Curated Resources.Methods Mol Biol2022
35713856Biomedical Literature Mining and Its Components.Methods Mol Biol2022
36010264Integrated Approaches to Identify miRNA Biomarkers Associated with Cognitive Dysfunction in Multiple Sclerosis Using Text Mining, Gene Expression, Pathways, and GWAS.Diagnostics (Basel)2022
35713870Extracting Significant Comorbid Diseases from MeSH Index of PubMed.Methods Mol Biol2022
35713869A Text Mining Protocol for Extracting Drug-Drug Interaction and Adverse Drug Reactions Specific to Patient Population, Pharmacokinetics, Pharmacodynamics, and Disease.Methods Mol Biol2022
35713868A Text Mining Protocol for Predicting Drug-Drug Interaction and Adverse Drug Reactions from PubMed Articles.Methods Mol Biol2022
35713861A Simple Computational Approach to Identify Potential Drugs for Multiple Sclerosis and Cognitive Disorders from Expert Curated Resources.Methods Mol Biol2022
35713856Biomedical Literature Mining and Its Components.Methods Mol Biol2022
33544847Advancement in predicting interactions between drugs used to treat psoriasis and its comorbidities by integrating molecular and clinical resources.J Am Med Inform Assoc2021
33544847Advancement in predicting interactions between drugs used to treat psoriasis and its comorbidities by integrating molecular and clinical resources.J Am Med Inform Assoc2021
31583627Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text-Mining Protocol.Methods Mol Biol2020
31583627Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text-Mining Protocol.Methods Mol Biol2020
33091537Caenorhabditis elegans as a possible model to screen anti-Alzheimer's therapeutics.J Pharmacol Toxicol Methods2020
33091537Caenorhabditis elegans as a possible model to screen anti-Alzheimer's therapeutics.J Pharmacol Toxicol Methods2020
30641038Atopic Dermatitis Is an IL-13-Dominant Disease with Greater Molecular Heterogeneity Compared to Psoriasis.J Invest Dermatol2019
30396000Molecular dynamics simulation analysis of conessine against multi drug resistant Serratia marcescens.Infect Genet Evol2019
30342048Drug Repurposing Prediction for Immune-Mediated Cutaneous Diseases using a Word-Embedding-Based Machine Learning Approach.J Invest Dermatol2019
30641038Atopic Dermatitis Is an IL-13-Dominant Disease with Greater Molecular Heterogeneity Compared to Psoriasis.J Invest Dermatol2019
31031798Integrative Approach to Reveal Cell Type Specificity and Gene Candidates for Psoriatic Arthritis Outside the MHC.Front Genet2019
30745462Hypersensitive IFN Responses in Lupus Keratinocytes Reveal Key Mechanistic Determinants in Cutaneous Lupus.J Immunol2019
31031798Integrative Approach to Reveal Cell Type Specificity and Gene Candidates for Psoriatic Arthritis Outside the MHC.Front Genet2019
30745462Hypersensitive IFN Responses in Lupus Keratinocytes Reveal Key Mechanistic Determinants in Cutaneous Lupus.J Immunol2019
30396000Molecular dynamics simulation analysis of conessine against multi drug resistant Serratia marcescens.Infect Genet Evol2019
30342048Drug Repurposing Prediction for Immune-Mediated Cutaneous Diseases using a Word-Embedding-Based Machine Learning Approach.J Invest Dermatol2019
29031600Transcriptional determinants of individualized inflammatory responses at anatomically separate sites.J Allergy Clin Immunol2018
29031600Transcriptional determinants of individualized inflammatory responses at anatomically separate sites.J Allergy Clin Immunol2018
30301895Genetic signature to provide robust risk assessment of psoriatic arthritis development in psoriasis patients.Nat Commun2018
29728247Mining protein phosphorylation information from biomedical literature using NLP parsing and Support Vector Machines.Comput Methods Programs Biomed2018
30301895Genetic signature to provide robust risk assessment of psoriatic arthritis development in psoriasis patients.Nat Commun2018
29728247Mining protein phosphorylation information from biomedical literature using NLP parsing and Support Vector Machines.Comput Methods Programs Biomed2018
28623363Machine learning workflow to enhance predictions of Adverse Drug Reactions (ADRs) through drug-gene interactions: application to drugs for cutaneous diseases.Sci Rep2017
28623363Machine learning workflow to enhance predictions of Adverse Drug Reactions (ADRs) through drug-gene interactions: application to drugs for cutaneous diseases.Sci Rep2017
28331849A Review of Recent Advancement in Integrating Omics Data with Literature Mining towards Biomedical Discoveries.Int J Genomics2017
28331849A Review of Recent Advancement in Integrating Omics Data with Literature Mining towards Biomedical Discoveries.Int J Genomics2017
26774763Classification of clinically useful sentences in clinical evidence resources.J Biomed Inform2016
26774763Classification of clinically useful sentences in clinical evidence resources.J Biomed Inform2016
27570671Towards Evidence-based Precision Medicine: Extracting Population Information from Biomedical Text using Binary Classifiers and Syntactic Patterns.AMIA Jt Summits Transl Sci Proc2016
27570671Towards Evidence-based Precision Medicine: Extracting Population Information from Biomedical Text using Binary Classifiers and Syntactic Patterns.AMIA Jt Summits Transl Sci Proc2016
25659452HPIminer: A text mining system for building and visualizing human protein interaction networks and pathways.J Biomed Inform2015
25659452HPIminer: A text mining system for building and visualizing human protein interaction networks and pathways.J Biomed Inform2015
26958301Classification of Clinically Useful Sentences in MEDLINE.AMIA Annu Symp Proc2015
26209007Agile text mining for the 2014 i2b2/UTHealth Cardiac risk factors challenge.J Biomed Inform2015
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