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Author Details

Tomas Babak
Queen's University
2004
34
24
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
34238941Author Correction: A one-step tRNA-CRISPR system for genome-wide genetic interaction mapping in mammalian cells.Sci Rep2021
33665563<i>Cis-</i>regulatory mutations with driver hallmarks in major cancers.iScience2021
33723044Lineage-specific selection and the evolution of virulence in the <i>Candida</i> clade.Proc Natl Acad Sci U S A2021
34816127Identifying tumorigenic non-coding mutations through altered <i>cis</i>-regulation.STAR Protoc2021
31601883A one-step tRNA-CRISPR system for genome-wide genetic interaction mapping in mammalian cells.Sci Rep2019
26850229Erratum to: Dynamics of gene silencing during X inactivation using allele-specific RNA-seq.Genome Biol2016
25848752Genetic conflict reflected in tissue-specific maps of genomic imprinting in human and mouse.Nat Genet2015
26235224Dynamics of gene silencing during X inactivation using allele-specific RNA-seq.Genome Biol2015
24244203Oct4 is required ~E7.5 for proliferation in the primitive streak.PLoS Genet2013
22615574Global analysis of the evolution and mechanism of echinocandin resistance in Candida glabrata.PLoS Pathog2012
22907492Identification of imprinted loci by transcriptome sequencing.Methods Mol Biol2012
22454233A quantitative atlas of polyadenylation in five mammals.Genome Res2012
22479196Critical evaluation of imprinted gene expression by RNA-Seq: a new perspective.PLoS Genet2012
21483757Systematic detection of polygenic cis-regulatory evolution.PLoS Genet2011
21317536NSR-seq transcriptional profiling enables identification of a gene signature of Plasmodium falciparum parasites infecting children.J Clin Invest2011
20363980Global survey of escape from X inactivation by RNA-sequencing in mouse.Genome Res2010
20707912Genetic validation of whole-transcriptome sequencing for mapping expression affected by cis-regulatory variation.BMC Genomics2010
19246989Prediction and verification of mouse tRNA gene families.RNA Biol2009
19668204Digital transcriptome profiling using selective hexamer priming for cDNA synthesis.Nat Methods2009
19789211A systematic characterization of Cwc21, the yeast ortholog of the human spliceosomal protein SRm300.RNA2009
19371447Conservation of core gene expression in vertebrate tissues.J Biol2009
18204908miRNA and piRNA localization in the male mammalian meiotic nucleus.Chromosome Res2008
19026546Global survey of genomic imprinting by transcriptome sequencing.Curr Biol2008
17199047SMAUG is a major regulator of maternal mRNA destabilization in Drosophila and its translation is activated by the PAN GU kinase.Dev Cell2007
17923096Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function.Cell2007
18026111Using expression profiling data to identify human microRNA targets.Nat Methods2007
17565696Functional coordination of alternative splicing in the mammalian central nervous system.Genome Biol2007
17263882Considerations in the identification of functional RNA structural elements in genomic alignments.BMC Bioinformatics2007
16938557Microarray analysis of RNA processing and modification.Methods Enzymol2006
15640439Detection and discovery of RNA modifications using microarrays.Nucleic Acids Res2005
15920104Global analysis of yeast RNA processing identifies new targets of RNase III and uncovers a link between tRNA 5' end processing and tRNA splicing.Nucleic Acids Res2005
16083503A systematic search for new mammalian noncoding RNAs indicates little conserved intergenic transcription.BMC Genomics2005
15496526Probing microRNAs with microarrays: tissue specificity and functional inference.RNA2004
15610736Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform.Mol Cell2004
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Collaborators

Timothy R Hughes
University of Toronto
Co-authored papers 14
Benjamin J Blencowe
University of Toronto
Co-authored papers 8
Quaid Morris
Sloan Kettering Institute
Co-authored papers 5
Derek van der Kooy
University of Toronto
Co-authored papers 5
Ronghua Chen
Co-authored papers 3
Wen Zhang
Nanjing Agricultural University
Co-authored papers 3
Gordon Chua
University of Calgary
Co-authored papers 3
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University of Toronto College Street
Co-authored papers 3
Brendan J Frey
University of Toronto
Co-authored papers 3
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Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital
Co-authored papers 2
Qun Pan
University of Toronto
Co-authored papers 2
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University of Toronto
Co-authored papers 2
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Co-authored papers 2
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Co-authored papers 2
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Icahn School of Medicine at Mount Sinai
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Co-authored papers 2
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Indiana University School of Medicine
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Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences
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Bin Zhang
Graduate School of Medicine, The University of Tokyo
Co-authored papers 1
Rui Zhang
Co-authored papers 1
Grace Guo
Co-authored papers 1
Andrew Emili
Boston University School of Medicine, Boston University
Co-authored papers 1
Michael Brudno
University of Toronto
Co-authored papers 1
Kevin S Smith
Stanford University
Co-authored papers 1
Margarete Mehrabian
Co-authored papers 1
Emily K Tsang
Co-authored papers 1
Adnan Derti
Co-authored papers 1
Harm van Bakel
Icahn School of Medicine at Mount Sinai
Co-authored papers 1
Peter W Zandstra
Co-authored papers 1
Release 1.2