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Author Details

Samuel Kaplan
The University of Texas Medical School
1964
218
56
Christopher Churas (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
23291753Transcriptome response to nitrosative stress in Rhodobacter sphaeroides 2.4.1.Biosci Biotechnol Biochem2013
23291753Transcriptome response to nitrosative stress in Rhodobacter sphaeroides 2.4.1.Biosci Biotechnol Biochem2013
19572507Revealing linear aggregates of light harvesting antenna proteins in photosynthetic membranes.Langmuir2010
19572507Revealing linear aggregates of light harvesting antenna proteins in photosynthetic membranes.Langmuir2010
19411326Half-Site DNA sequence and spacing length contributions to PrrA binding to PrrA site 2 of RSP3361 in Rhodobacter sphaeroides 2.4.1.J Bacteriol2009
19411327Regulation of gene expression by PrrA in Rhodobacter sphaeroides 2.4.1: role of polyamines and DNA topology.J Bacteriol2009
19411326Half-Site DNA sequence and spacing length contributions to PrrA binding to PrrA site 2 of RSP3361 in Rhodobacter sphaeroides 2.4.1.J Bacteriol2009
19411327Regulation of gene expression by PrrA in Rhodobacter sphaeroides 2.4.1: role of polyamines and DNA topology.J Bacteriol2009
17965166Transcriptome dynamics during the transition from anaerobic photosynthesis to aerobic respiration in Rhodobacter sphaeroides 2.4.1.J Bacteriol2008
17965166Transcriptome dynamics during the transition from anaerobic photosynthesis to aerobic respiration in Rhodobacter sphaeroides 2.4.1.J Bacteriol2008
18689484The use of chromatin immunoprecipitation to define PpsR binding activity in Rhodobacter sphaeroides 2.4.1.J Bacteriol2008
18487335Role of the global transcriptional regulator PrrA in Rhodobacter sphaeroides 2.4.1: combined transcriptome and proteome analysis.J Bacteriol2008
18442284A computational strategy to analyze label-free temporal bottom-up proteomics data.J Proteome Res2008
18487335Role of the global transcriptional regulator PrrA in Rhodobacter sphaeroides 2.4.1: combined transcriptome and proteome analysis.J Bacteriol2008
18689484The use of chromatin immunoprecipitation to define PpsR binding activity in Rhodobacter sphaeroides 2.4.1.J Bacteriol2008
18442284A computational strategy to analyze label-free temporal bottom-up proteomics data.J Proteome Res2008
17172323Genome analyses of three strains of Rhodobacter sphaeroides: evidence of rapid evolution of chromosome II.J Bacteriol2007
17660296Novel heme-based oxygen sensor with a revealing evolutionary history.J Biol Chem2007
17172323Genome analyses of three strains of Rhodobacter sphaeroides: evidence of rapid evolution of chromosome II.J Bacteriol2007
17704227Proteomic characterization of the Rhodobacter sphaeroides 2.4.1 photosynthetic membrane: identification of new proteins.J Bacteriol2007
17557830Dominant role of the cbb3 oxidase in regulation of photosynthesis gene expression through the PrrBA system in Rhodobacter sphaeroides 2.4.1.J Bacteriol2007
17506668Postgenomic adventures with Rhodobacter sphaeroides.Annu Rev Microbiol2007
17676874Comparative genomics and site-directed mutagenesis support the existence of only one input channel for protons in the C-family (cbb3 oxidase) of heme-copper oxygen reductases.Biochemistry2007
17557830Dominant role of the cbb3 oxidase in regulation of photosynthesis gene expression through the PrrBA system in Rhodobacter sphaeroides 2.4.1.J Bacteriol2007
17676874Comparative genomics and site-directed mutagenesis support the existence of only one input channel for protons in the C-family (cbb3 oxidase) of heme-copper oxygen reductases.Biochemistry2007
17704227Proteomic characterization of the Rhodobacter sphaeroides 2.4.1 photosynthetic membrane: identification of new proteins.J Bacteriol2007
17660296Novel heme-based oxygen sensor with a revealing evolutionary history.J Biol Chem2007
17506668Postgenomic adventures with Rhodobacter sphaeroides.Annu Rev Microbiol2007
16889416Application of the accurate mass and time tag approach to the proteome analysis of sub-cellular fractions obtained from Rhodobacter sphaeroides 2.4.1. Aerobic and photosynthetic cell cultures.J Proteome Res2006
16849810Interacting specificity of a histidine kinase and its cognate response regulator: the PrrBA system of Rhodobacter sphaeroides.Microbiology (Reading)2006
16889416Application of the accurate mass and time tag approach to the proteome analysis of sub-cellular fractions obtained from Rhodobacter sphaeroides 2.4.1. Aerobic and photosynthetic cell cultures.J Proteome Res2006
16828186Comparison of aerobic and photosynthetic Rhodobacter sphaeroides 2.4.1 proteomes.J Microbiol Methods2006
16828186Comparison of aerobic and photosynthetic Rhodobacter sphaeroides 2.4.1 proteomes.J Microbiol Methods2006
16849810Interacting specificity of a histidine kinase and its cognate response regulator: the PrrBA system of Rhodobacter sphaeroides.Microbiology (Reading)2006
15667262Interacting regulatory networks in the facultative photosynthetic bacterium, Rhodobacter sphaeroides 2.4.1.Biochem Soc Trans2005
15667262Interacting regulatory networks in the facultative photosynthetic bacterium, Rhodobacter sphaeroides 2.4.1.Biochem Soc Trans2005
15746409An open letter to Elias Zerhouni.Science2005
16207904Combining microarray and genomic data to predict DNA binding motifs.Microbiology (Reading)2005
16207904Combining microarray and genomic data to predict DNA binding motifs.Microbiology (Reading)2005
15746409An open letter to Elias Zerhouni.Science2005
14662761Effects of oxygen and light intensity on transcriptome expression in Rhodobacter sphaeroides 2.4.1. Redox active gene expression profile.J Biol Chem2004
14662761Effects of oxygen and light intensity on transcriptome expression in Rhodobacter sphaeroides 2.4.1. Redox active gene expression profile.J Biol Chem2004
15028685DNA sequence duplication in Rhodobacter sphaeroides 2.4.1: evidence of an ancient partnership between chromosomes I and II.J Bacteriol2004
15231807Construction and validation of the Rhodobacter sphaeroides 2.4.1 DNA microarray: transcriptome flexibility at diverse growth modes.J Bacteriol2004
15196036Reconstitution of the Rhodobacter sphaeroides cbb3-PrrBA signal transduction pathway in vitro.Biochemistry2004
14999403Oxygen intervention in the regulation of gene expression: the photosynthetic bacterial paradigm.Cell Mol Life Sci2004
15231807Construction and validation of the Rhodobacter sphaeroides 2.4.1 DNA microarray: transcriptome flexibility at diverse growth modes.J Bacteriol2004
15196036Reconstitution of the Rhodobacter sphaeroides cbb3-PrrBA signal transduction pathway in vitro.Biochemistry2004
14999403Oxygen intervention in the regulation of gene expression: the photosynthetic bacterial paradigm.Cell Mol Life Sci2004
15028685DNA sequence duplication in Rhodobacter sphaeroides 2.4.1: evidence of an ancient partnership between chromosomes I and II.J Bacteriol2004
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Collaborators

Timothy J Donohue
University of Wisconsin
Co-authored papers 28
Jesus M Eraso
Co-authored papers 19
Jung Hyeob Roh
Co-authored papers 14
Madhusudan Choudhary
ICAR-Central Soil Salinity Research Institute
Co-authored papers 13
Chris Mackenzie
McGovern Medical School
Co-authored papers 11
Nigel J Mouncey
US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 7
Mary S Lipton
Pacific Northwest National Laboratory
Co-authored papers 5
Richard D Smith
Pacific Northwest National Laboratory
Co-authored papers 3
Erica Sodergren
The Genome Institute at Washington University
Co-authored papers 3
George M Weinstock
The Genome Center at Washington University, Washington University School of Medicine
Co-authored papers 3
Harold Varmus
Co-authored papers 2
Andrew B Onderdonk
Brigham and Women's Hospital, Harvard Medical School
Co-authored papers 2
Melvin I Simon
Co-authored papers 1
Carol A Gross
University of California san francisco
Co-authored papers 1
David C Schwartz
University of Wisconsin-Madison
Co-authored papers 1
Robert Landick
University of Wisconsin-Madison
Co-authored papers 1
Erika Kvikstad
University of Oxford
Co-authored papers 1
Jessica Severin
Center for Integrative Medical Sciences
Co-authored papers 1
Seth A Darst
The Rockefeller University
Co-authored papers 1
Shiguo Zhou
Sage Science Inc.
Co-authored papers 1
Matthew E Monroe
Pacific Northwest National Laboratory
Co-authored papers 1
Joshua N Adkins
Co-authored papers 1
Stephen J Elledge
Howard Hughes Medical Institute, Brigham and Women's Hospital, Harvard Medical School
Co-authored papers 1
Rod Runnheim
Co-authored papers 1
Xiuxia Du
Co-authored papers 1
Christopher Churas (CM4AI)
University of California San Diego
Co-authored papers 1
Linyong Mao
Co-authored papers 1
Jason W Hickman
University of Washington
Co-authored papers 1
Steven L Salzberg
Center for Computational Biology, Johns Hopkins University
Co-authored papers 1
Dan Forrest
Co-authored papers 1
Release 1.2