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Author Details

Romain Fenouil
Universite de Toulon, CNRS
2009
22
16
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36985346Adaptation Strategies to High Hydrostatic Pressures in <i>Pseudothermotoga</i> species Revealed by Transcriptional Analyses.Microorganisms2023
37257775Peyer's patch phagocytes acquire specific transcriptional programs that influence their maturation and activation profiles.Mucosal Immunol2023
32814051Alternative Enhancer Usage and Targeted Polycomb Marking Hallmark Promoter Choice during T Cell Differentiation.Cell Rep2020
33343528Responses to the Hydrostatic Pressure of Surface and Subsurface Strains of <i>Pseudothermotoga elfii</i> Revealing the Piezophilic Nature of the Strain Originating From an Oil-Producing Well.Front Microbiol2020
30177761Influenza virus infection causes global RNAPII termination defects.Nat Struct Mol Biol2018
28475896The RNA Exosome Syncs IAV-RNAPII Transcription to Promote Viral Ribogenesis and Infectivity.Cell2017
26789921Targeting Viral Proteostasis Limits Influenza Virus, HIV, and Dengue Virus Infection.Immunity2016
26673693Dynamic recruitment of Ets1 to both nucleosome-occupied and -depleted enhancer regions mediates a transcriptional program switch during early T-cell differentiation.Nucleic Acids Res2016
27153642Pasha: a versatile R package for piling chromatin HTS data.Bioinformatics2016
27127234Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation.Science2016
26797145Lineage-specific enhancers activate self-renewal genes in macrophages and embryonic stem cells.Science2016
25732733Transcription-dependent generation of a specialized chromatin structure at the TCRβ locus.J Immunol2015
26560631The chromatin environment shapes DNA replication origin organization and defines origin classes.Genome Res2015
25615415Site- and allele-specific polycomb dysregulation in T-cell leukaemia.Nat Commun2015
24842994Tyrosine phosphorylation of RNA polymerase II CTD is associated with antisense promoter transcription and active enhancers in mammalian cells.Elife2014
24365181Divergent transcription is associated with promoters of transcriptional regulators.BMC Genomics2013
22549466Threonine-4 of mammalian RNA polymerase II CTD is targeted by Polo-like kinase 3 and required for transcriptional elongation.EMBO J2012
22961379Argonaute proteins couple chromatin silencing to alternative splicing.Nat Struct Mol Biol2012
23100115CpG islands and GC content dictate nucleosome depletion in a transcription-independent manner at mammalian promoters.Genome Res2012
21792193Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 Lys36.Nat Struct Mol Biol2011
21765417Transcription initiation platforms and GTF recruitment at tissue-specific enhancers and promoters.Nat Struct Mol Biol2011
19193731CoCAS: a ChIP-on-chip analysis suite.Bioinformatics2009
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Collaborators

Marta Gut
Universitat de Barcelona (UB)
Co-authored papers 10
Ivo Gut
Spain Universitat de Barcelona (UB)
Co-authored papers 10
Dirk Eick
Helmholtz Center Munich and Center for Integrated Protein Science Munich (CIPSM)
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Department of Computer Science and Informatics Institute, University of Missouri
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Jian Jin
Union Hospital, Tongji Medical College, Huazhong University of Science and Technology
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Minji Byun
Icahn School of Medicine at Mount Sinai
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David Jimenez-Morales
J. David Gladstone Institutes
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Jessica Sook Yuin Ho
Icahn School of Medicine at Mount Sinai, Duke-NUS Medical School
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Benjamin D Greenbaum
Memorial Sloan Kettering Cancer Center
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Giorgi Metreveli
Icahn School of Medicine at Mount Sinai
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Jennifer R Hamilton
University of California berkeley
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Sven Heinz
U.C. San Diego School of Medicine
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Matthew T Weirauch
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Release 1.2