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Author Details

Aparna Pallavajjala
Johns Hopkins University School of Medicine
2014
26
10
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37276081Cell-free DNA measurable residual disease as a predictor of postallogeneic hematopoietic cell transplant outcomes.Blood Adv2023
34864149Validation of Long Mononucleotide Repeat Markers for Detection of Microsatellite Instability.J Mol Diagn2022
35730391Clonal hematopoiesis in men living with HIV and association with subclinical atherosclerosis.AIDS2022
35561840Utility of targeted next-generation sequencing assay to detect 1p/19q co-deletion in formalin-fixed paraffin-embedded glioma specimens.Hum Pathol2022
36162758Optimizing Insertion and Deletion Detection Using Next-Generation Sequencing in the Clinical Laboratory.J Mol Diagn2022
36376842HER2 amplification by next-generation sequencing to identify HER2-positive invasive breast cancer with negative HER2 immunohistochemistry.Cancer Cell Int2022
35312750Artificial Intelligence-Assisted Serial Analysis of Clinical Cancer Genomics Data Identifies Changing Treatment Recommendations and Therapeutic Targets.Clin Cancer Res2022
34358677Diagnostic Utility of Gene Fusion Panel to Detect Gene Fusions in Fresh and Formalin-Fixed, Paraffin-Embedded Cancer Specimens.J Mol Diagn2021
33929516IDH1 and IDH2 Mutations in Colorectal Cancers.Am J Clin Pathol2021
33577993Clinical Utility of Targeted Next-Generation Sequencing Assay to Detect Copy Number Variants Associated with Myelodysplastic Syndrome in Myeloid Malignancies.J Mol Diagn2021
34209587Germline <i>ERBB2</i>/<i>HER2</i> Coding Variants Are Associated with Increased Risk of Myeloproliferative Neoplasms.Cancers (Basel)2021
32555149CREBBP and STAT6 co-mutation and 16p13 and 1p36 loss define the t(14;18)-negative diffuse variant of follicular lymphoma.Blood Cancer J2020
29629977Clinicopathologic Features and Genetic Alterations of a Primary Osteosarcoma of the Uterine Corpus.Int J Gynecol Pathol2019
30222900Granular cell astrocytoma: an aggressive IDH-wildtype diffuse glioma with molecular genetic features of primary glioblastoma.Brain Pathol2019
31010836Lineage-Specific Alterations in Gynecologic Neoplasms with Choriocarcinomatous Differentiation: Implications for Origin and Therapeutics.Clin Cancer Res2019
31131348Genetic Alterations Detected in Cell-Free DNA Are Associated With Enzalutamide and Abiraterone Resistance in Castration-Resistant Prostate Cancer.JCO Precis Oncol2019
28573893Identification of a novel KMT2A-SEPT14 fusion in acute myeloid leukemia.Leuk Lymphoma2018
30140723Biotinylated amplicon sequencing: A method for preserving DNA samples of limited quantity.Pract Lab Med2018
29505425Next-generation Sequencing Reveals Recurrent Somatic Mutations in Small Cell Neuroendocrine Carcinoma of the Uterine Cervix.Am J Surg Pathol2018
28882084Genomic characterization of chromosome translocations in patients with T/myeloid mixed-phenotype acute leukemia.Leuk Lymphoma2018
28152506Detection fidelity of AR mutations in plasma derived cell-free DNA.Oncotarget2017
26949921Characterization of functionally active gene fusions in human papillomavirus related oropharyngeal squamous cell carcinoma.Int J Cancer2016
27060678NUP98-PHF23 fusion is recurrent in acute myeloid leukemia and shares gene expression signature of leukemic stem cells.Leuk Res2016
26031834Transflip mutations produce deletions in pancreatic cancer.Genes Chromosomes Cancer2015
25132481Haplotype counting by next-generation sequencing for ultrasensitive human DNA detection.J Mol Diagn2014
25017478False positives in multiplex PCR-based next-generation sequencing have unique signatures.J Mol Diagn2014
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Collaborators

Christopher D Gocke
Johns Hopkins University School of Medicine
Co-authored papers 11
Sarah J Wheelan
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 4
Ben Ho Park
Vanderbilt University Medical Center
Co-authored papers 3
Emmanuel S Antonarakis
The Sidney Kimmel Cancer Comprehensive Cancer Center at Johns Hopkins
Co-authored papers 2
Michael A Carducci
Johns Hopkins School of Medicine
Co-authored papers 2
Mario A Eisenberger
Johns Hopkins University
Co-authored papers 2
Channing J Paller
Johns Hopkins University School of Medicine
Co-authored papers 2
Fausto J Rodriguez
University of California Los Angeles
Co-authored papers 2
Bruce J Trock
Johns Hopkins University School of Medicine
Co-authored papers 2
Richard J Jones
Sidney Kimmel Cancer Center, Johns Hopkins University
Co-authored papers 2
Joseph B Margolick
Johns Hopkins Bloomberg School of Public Health
Co-authored papers 1
Alison R Moliterno
Johns Hopkins Hospital
Co-authored papers 1
Stefania Pittaluga
National Cancer Institute, National Institutes of Health
Co-authored papers 1
Theresa Guo
Moores Cancer Center, University of California
Co-authored papers 1
Elaine S Jaffe
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Co-authored papers 1
Michael J Considine
Johns Hopkins University School of Medicine
Co-authored papers 1
Jonathan Pevsner
Kennedy Krieger Institute, Johns Hopkins University School of Medicine
Co-authored papers 1
Donna M Williams
Johns Hopkins University School of Medicine
Co-authored papers 1
Wendy S Post
Co-authored papers 1
Matthew J Budoff
Lundquist Institute at Harbor university of california los angeles Medical Center
Co-authored papers 1
Joseph A Califano
University of California
Co-authored papers 1
Brian W Simons
Center for Comparative Medicine, Baylor College of Medicine
Co-authored papers 1
Zubair Khan
University of Texas at Houston Health Science Center
Co-authored papers 1
Justin A Bishop
UT Southwestern Medical Center
Co-authored papers 1
Nara Sobreira
Johns Hopkins University
Co-authored papers 1
Daria A Gaykalova
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 1
Tamara L Lotan
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Release 1.2