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Author Details

Vivek Swarup
David Geffen School of Medicine, University of California los angeles
2007
50
29
PMIDPaper TitleJournal TitlePublished Year
37426759hdWGCNA identifies co-expression networks in high-dimensional transcriptomics data.Cell Rep Methods2023
37277179Integrin-Driven Axon Regeneration in the Spinal Cord Activates a Distinctive CNS Regeneration Program.J Neurosci2023
37426759hdWGCNA identifies co-expression networks in high-dimensional transcriptomics data.Cell Rep Methods2023
37045511Proteomic Data Advance Targeted Drug Development for Neurogenerative Diseases.Biol Psychiatry2023
37546983Spatial and single-nucleus transcriptomic analysis of genetic and sporadic forms of Alzheimer's Disease.bioRxiv2023
37546983Spatial and single-nucleus transcriptomic analysis of genetic and sporadic forms of Alzheimer's Disease.bioRxiv2023
37045511Proteomic Data Advance Targeted Drug Development for Neurogenerative Diseases.Biol Psychiatry2023
37277179Integrin-Driven Axon Regeneration in the Spinal Cord Activates a Distinctive CNS Regeneration Program.J Neurosci2023
34997092Cortical diurnal rhythms remain intact with microglial depletion.Sci Rep2022
35705056Absence of microglia promotes diverse pathologies and early lethality in Alzheimer's disease mice.Cell Rep2022
35755130Protocol for single-nucleus ATAC sequencing and bioinformatic analysis in frozen human brain tissue.STAR Protoc2022
35882228Molecular signatures underlying neurofibrillary tangle susceptibility in Alzheimer's disease.Neuron2022
36213002Pathway-based approach reveals differential sensitivity to E2F1 inhibition in glioblastoma.Cancer Res Commun2022
36323788Broad transcriptomic dysregulation occurs across the cerebral cortex in ASD.Nature2022
36590162Single-nuclei transcriptome analysis of Huntington disease iPSC and mouse astrocytes implicates maturation and functional deficits.iScience2022
36543778Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation.Nat Commun2022
34997092Cortical diurnal rhythms remain intact with microglial depletion.Sci Rep2022
35705056Absence of microglia promotes diverse pathologies and early lethality in Alzheimer's disease mice.Cell Rep2022
35755130Protocol for single-nucleus ATAC sequencing and bioinformatic analysis in frozen human brain tissue.STAR Protoc2022
36590162Single-nuclei transcriptome analysis of Huntington disease iPSC and mouse astrocytes implicates maturation and functional deficits.iScience2022
36543778Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation.Nat Commun2022
36213002Pathway-based approach reveals differential sensitivity to E2F1 inhibition in glioblastoma.Cancer Res Commun2022
36323788Broad transcriptomic dysregulation occurs across the cerebral cortex in ASD.Nature2022
35882228Molecular signatures underlying neurofibrillary tangle susceptibility in Alzheimer's disease.Neuron2022
32927465Pharmacokinetic, behavioral, and brain activity effects of ο<sup>9</sup>-tetrahydrocannabinol in adolescent male and female rats.Neuropsychopharmacology2021
34239132Single-nucleus chromatin accessibility and transcriptomic characterization of Alzheimer's disease.Nat Genet2021
33907024Rogue gene networks gone awry in Alzheimer's disease.Neural Regen Res2021
33893290Generation of a humanized Aβ expressing mouse demonstrating aspects of Alzheimer's disease-like pathology.Nat Commun2021
34155331Cocaine induces paradigm-specific changes to the transcriptome within the ventral tegmental area.Neuropsychopharmacology2021
33262247Unexpected Role of Physiological Estrogen in Acute Stress-Induced Memory Deficits.J Neurosci2021
32826066Atypical Neurogenesis in Induced Pluripotent Stem Cells From Autistic Individuals.Biol Psychiatry2021
32927465Pharmacokinetic, behavioral, and brain activity effects of ο<sup>9</sup>-tetrahydrocannabinol in adolescent male and female rats.Neuropsychopharmacology2021
34634459Systems biology approaches to unravel the molecular and genetic architecture of Alzheimer's disease and related tauopathies.Neurobiol Dis2021
34433559Microglial dyshomeostasis drives perineuronal net and synaptic loss in a CSF1R<sup>+/-</sup> mouse model of ALSP, which can be rescued via CSF1R inhibitors.Sci Adv2021
33907024Rogue gene networks gone awry in Alzheimer's disease.Neural Regen Res2021
33893290Generation of a humanized Aβ expressing mouse demonstrating aspects of Alzheimer's disease-like pathology.Nat Commun2021
34433559Microglial dyshomeostasis drives perineuronal net and synaptic loss in a CSF1R<sup>+/-</sup> mouse model of ALSP, which can be rescued via CSF1R inhibitors.Sci Adv2021
34634459Systems biology approaches to unravel the molecular and genetic architecture of Alzheimer's disease and related tauopathies.Neurobiol Dis2021
34155331Cocaine induces paradigm-specific changes to the transcriptome within the ventral tegmental area.Neuropsychopharmacology2021
34239132Single-nucleus chromatin accessibility and transcriptomic characterization of Alzheimer's disease.Nat Genet2021
33262247Unexpected Role of Physiological Estrogen in Acute Stress-Induced Memory Deficits.J Neurosci2021
32826066Atypical Neurogenesis in Induced Pluripotent Stem Cells From Autistic Individuals.Biol Psychiatry2021
32668255Meta-Analysis of the Alzheimer's Disease Human Brain Transcriptome and Functional Dissection in Mouse Models.Cell Rep2020
33207193Tau Pathology Drives Dementia Risk-Associated Gene Networks toward Chronic Inflammatory States and Immunosuppression.Cell Rep2020
32803238Integrative genomics approach identifies conserved transcriptomic networks in Alzheimer's disease.Hum Mol Genet2020
32951604Effects of long-term and brain-wide colonization of peripheral bone marrow-derived myeloid cells in the CNS.J Neuroinflammation2020
32668255Meta-Analysis of the Alzheimer's Disease Human Brain Transcriptome and Functional Dissection in Mouse Models.Cell Rep2020
33207193Tau Pathology Drives Dementia Risk-Associated Gene Networks toward Chronic Inflammatory States and Immunosuppression.Cell Rep2020
32803238Integrative genomics approach identifies conserved transcriptomic networks in Alzheimer's disease.Hum Mol Genet2020
32951604Effects of long-term and brain-wide colonization of peripheral bone marrow-derived myeloid cells in the CNS.J Neuroinflammation2020
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Collaborators

Daniel H Geschwind
University of California los angeles
Co-authored papers 17
Neelroop N Parikshak
Co-authored papers 6
Michael J Gandal
Perelman School of Medicine, University of Pennsylvania
Co-authored papers 4
Allan I Levey
Emory University School of Medicine
Co-authored papers 4
Eric B Dammer
Goizueta Alzheimer's Disease Research Center, Emory University School of Medicine
Co-authored papers 3
Christopher Hartl
Co-authored papers 3
Riki Kawaguchi
Co-authored papers 3
Elizabeth Head
University of California Irvine
Co-authored papers 3
James J Lah
Goizueta Alzheimer's Disease Research Center, Emory University School of Medicine
Co-authored papers 3
Mark Gerstein
Yale University
Co-authored papers 2
Larsson Omberg
Cornell University
Co-authored papers 2
John Q Trojanowski
University of Pennsylvania
Co-authored papers 2
Xue Wang
Mayo Clinic
Co-authored papers 2
Steve Horvath
David Geffen School of Medicine, University of California los angeles
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Ali Mortazavi
Co-authored papers 2
Benjamin J Blencowe
University of Toronto
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Daifeng Wang
University of Wisconsin-Madison
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Virpi Leppä
Co-authored papers 2
Mariet Allen
Mayo Clinic
Co-authored papers 2
Leslie M Thompson
Co-authored papers 2
Lara M Mangravite
Children's Hospital Oakland Research Institute
Co-authored papers 2
Ryan G Lim
Co-authored papers 2
Todd E Golde
Emory Center for Neurodegenerative Disease
Co-authored papers 2
Nil??fer Ertekin-Taner
Mayo Clinic
Co-authored papers 2
Cory C Funk
Institute for Systems Biology
Co-authored papers 2
Nathan D Price
Institute for Systems Biology
Co-authored papers 2
Paramita Chakrabarty
Center for Translational Research in Neurodegenerative Disease, University of Florida
Co-authored papers 2
Jungwoo Wren Kim
Institute for Cell Engineering, Johns Hopkins University School of Medicine
Co-authored papers 1
Heidi Martini-Stoica
Baylor College of Medicine
Co-authored papers 1
Steven A Goldman
Center for Translational Neuromedicine, University of Rochester Medical Center
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