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Author Details

Ren?? B??ttcher
Universitat Pompeu Fabra
2012
28
15
PMIDPaper TitleJournal TitlePublished Year
37165099Schlafen 12 restricts HIV-1 latency reversal by a codon-usage dependent post-transcriptional block in CD4+ T cells.Commun Biol2023
35265837Data-driven identification of inherent features of eukaryotic stress-responsive genes.NAR Genom Bioinform2022
35953468CHIKV infection reprograms codon optimality to favor viral RNA translation by altering the tRNA epitranscriptome.Nat Commun2022
34083438LRRC8A-containing chloride channel is crucial for cell volume recovery and survival under hypertonic conditions.Proc Natl Acad Sci U S A2021
34891161Fusion transcripts and their genomic breakpoints in polyadenylated and ribosomal RNA-minus RNA sequencing data.Gigascience2021
34556735Network neighbors of viral targets and differentially expressed genes in COVID-19 are drug target candidates.Sci Rep2021
32764824Host-derived circular RNAs display proviral activities in Hepatitis C virus-infected cells.PLoS Pathog2020
32064518A genetic analysis reveals novel histone residues required for transcriptional reprogramming upon stress.Nucleic Acids Res2020
33381834Probabilistic graphlets capture biological function in probabilistic molecular networks.Bioinformatics2020
30523037Rapid reversible changes in compartments and local chromatin organization revealed by hyperosmotic shock.Genome Res2019
30899024The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins.Nat Commun2019
30995481Functional Network Analysis Reveals the Relevance of SKIIP in the Regulation of Alternative Splicing by p38 SAPK.Cell Rep2019
29295717Cribriform and intraductal prostate cancer are associated with increased genomic instability and distinct genomic alterations.BMC Cancer2018
29921693Epithelial-Mesenchymal Transition in Human Prostate Cancer Demonstrates Enhanced Immune Evasion Marked by IDO1 Expression.Cancer Res2018
27907910A mononucleotide repeat in PRRT2 is an important, frequent target of mismatch repair deficiency in cancer.Oncotarget2017
29155810Regulation of transcription elongation in response to osmostress.PLoS Genet2017
26762204Identification of Patients with Recurrent Glioblastoma Who May Benefit from Combined Bevacizumab and CCNU Therapy: A Report from the BELOB Trial.Cancer Res2016
26656567FuMa: reporting overlap in RNA-seq detected fusion genes.Bioinformatics2016
27738172Evolution of protein phosphorylation across 18 fungal species.Science2016
27683107Human PDE4D isoform composition is deregulated in primary prostate cancer and indicative for disease progression and development of distant metastases.Oncotarget2016
27537383Loss of SLCO1B3 drives taxane resistance in prostate cancer.Br J Cancer2016
27292189Secreted Phospholipases A2 Are Intestinal Stem Cell Niche Factors with Distinct Roles in Homeostasis, Inflammation, and Cancer.Cell Stem Cell2016
27191985Gene-expression analysis of gleason grade 3 tumor glands embedded in low- and high-risk prostate cancer.Oncotarget2016
24488012Next-generation sequencing reveals novel rare fusion events with functional implication in prostate cancer.Oncogene2015
26575822Human phosphodiesterase 4D7 (PDE4D7) expression is increased in TMPRSS2-ERG-positive primary prostate cancer and independently adds to a reduced risk of post-surgical disease progression.Br J Cancer2015
25686826Novel long non-coding RNAs are specific diagnostic and prognostic markers for prostate cancer.Oncotarget2015
24373479Long noncoding RNA in prostate, bladder, and kidney cancer.Eur Urol2014
22581774Using a priori knowledge to align sequencing reads to their exact genomic position.Nucleic Acids Res2012
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Collaborators

Guido Jenster
Erasmus University Medical Center
Co-authored papers 11
Geert J L H van Leenders
Erasmus MC Cancer Institute, University Medical Center
Co-authored papers 7
Francesc Posas
Universitat Pompeu Fabra
Co-authored papers 7
Eul??lia de Nadal
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Co-authored papers 6
Carme Sol??
Universitat Pompeu Fabra (UPF)
Co-authored papers 4
Esther I Verhoef
Erasmus University Medical Center
Co-authored papers 4
Youri Hoogstrate
Erasmus MC Cancer Institute
Co-authored papers 3
Agnes Marije Hoogland
Erasmus Medical Center
Co-authored papers 2
Baldo Oliva
Universitat Pompeu Fabra
Co-authored papers 2
Charlotte F Kweldam
Anser Prostate Operation Clinic, Maasstad Hospital
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Paul C Boutros
University of California los angeles
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Pim J French
Erasmus MC Cancer Institute
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University of Toronto
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Pablo Latorre
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Alex Sparreboom
Ohio State University
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Michael Fraser
Princess Margaret Cancer Centre, University Health Network
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Robert G Bristow
University of Toronto
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Gerard Mart??nez-Cebri??n
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Johan M Kros
Erasmus MC Cancer Institute, University Medical Center Rotterdam
Co-authored papers 1
Fouad Yousif
Ontario Institute for Cancer Research
Co-authored papers 1
Peter Sarnow
Stanford University School of Medicine
Co-authored papers 1
Constance H Li
National Cancer Centre
Co-authored papers 1
Ronald de Wit
Erasmus MC Cancer Institute
Co-authored papers 1
Gerrit A Meijer
The Netherlands Cancer Institute
Co-authored papers 1
Michael David
Co-authored papers 1
Tapio Visakorpi
Prostate Cancer Research Center, Tampere University and Tays Cancer Center
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Kelsey M Haas
J. David Gladstone Institutes
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Ali Shilatifard
Northwestern University Feinberg School of Medicine
Co-authored papers 1
Sebasti??n Ch??vez
Universidad de Sevilla
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