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Author Details

Tapio Pahikkala
University of Turku
2003
55
18
PMIDPaper TitleJournal TitlePublished Year
37018586Budget-Based Classification of Parkinson's Disease From Resting State EEG.IEEE J Biomed Health Inform2023
34227169Detection of Prostate Cancer Using Biparametric Prostate MRI, Radiomics, and Kallikreins: A Retrospective Multicenter Study of Men With a Clinical Suspicion of Prostate Cancer.J Magn Reson Imaging2022
32418878Negative Predictive Value of Biparametric Prostate Magnetic Resonance Imaging in Excluding Significant Prostate Cancer: A Pooled Data Analysis Based on Clinical Data from Four Prospective, Registered Studies.Eur Urol Focus2021
34571438Adaptive risk prediction system with incremental and transfer learning.Comput Biol Med2021
34252952Modeling drug combination effects via latent tensor reconstruction.Bioinformatics2021
33077284Effect of oat β-glucan of different molecular weights on fecal bile acids, urine metabolites and pressure in the digestive tract - A human cross over trial.Food Chem2021
30329015Algebraic shortcuts for leave-one-out cross-validation in supervised network inference.Brief Bioinform2020
31783311Cost-effective survival prediction for patients with advanced prostate cancer using clinical trial and real-world hospital registry datasets.Int J Med Inform2020
31750988Qualitative and Quantitative Reporting of a Unique Biparametric MRI: Towards Biparametric MRI-Based Nomograms for Prediction of Prostate Biopsy Outcome in Men With a Clinical Suspicion of Prostate Cancer (IMPROD and MULTI-IMPROD Trials).J Magn Reson Imaging2020
33262326Leveraging multi-way interactions for systematic prediction of pre-clinical drug combination effects.Nat Commun2020
33261368Optimized reference spectrum for rating the façade sound insulation.J Acoust Soc Am2020
32890978GeFeS: A generalized wrapper feature selection approach for optimizing classification performance.Comput Biol Med2020
32885818Synthetic minority oversampling of vital statistics data with generative adversarial networks.J Am Med Inform Assoc2020
32645045Developing a pain intensity prediction model using facial expression: A feasibility study with electromyography.PLoS One2020
32523075Prediction of prostate cancer aggressiveness using <sup>18</sup>F-Fluciclovine (FACBC) PET and multisequence multiparametric MRI.Sci Rep2020
31588660Prostate Cancer Risk Stratification in Men With a Clinical Suspicion of Prostate Cancer Using a Unique Biparametric MRI and Expression of 11 Genes in Apparently Benign Tissue: Evaluation Using Machine-Learning Techniques.J Magn Reson Imaging2020
31501082Prebiopsy IMPROD Biparametric Magnetic Resonance Imaging Combined with Prostate-Specific Antigen Density in the Diagnosis of Prostate Cancer: An External Validation Study.Eur Urol Oncol2020
31566845Prediction of biochemical recurrence in prostate cancer patients who underwent prostatectomy using routine clinical prostate multiparametric MRI and decipher genomic score.J Magn Reson Imaging2020
30903647IMPROD biparametric MRI in men with a clinical suspicion of prostate cancer (IMPROD Trial): Sensitivity for prostate cancer detection in correlation with whole-mount prostatectomy sections and implications for focal therapy.J Magn Reson Imaging2019
31946628Skin Conductance Response to Gradual-Increasing Experimental Pain.Annu Int Conf IEEE Eng Med Biol Soc2019
30126322Tournament leave-pair-out cross-validation for receiver operating characteristic analysis.Stat Methods Med Res2019
31283771Radiomics and machine learning of multisequence multiparametric prostate MRI: Towards improved non-invasive prostate cancer characterization.PLoS One2019
28783645Fast Kronecker Product Kernel Methods via Generalized Vec Trick.IEEE Trans Neural Netw Learn Syst2018
29949975Learning with multiple pairwise kernels for drug bioactivity prediction.Bioinformatics2018
29894652A Comparative Study of Pairwise Learning Methods Based on Kernel Ridge Regression.Neural Comput2018
30371266Molecular Atlas of Postnatal Mouse Heart Development.J Am Heart Assoc2018
29513001Time-Gated Raman Spectroscopy for Quantitative Determination of Solid-State Forms of Fluorescent Pharmaceuticals.Anal Chem2018
29758452Evaluation of machine learning algorithms for improved risk assessment for Down's syndrome.Comput Biol Med2018
26924552Fitting methods for intravoxel incoherent motion imaging of prostate cancer on region of interest level: Repeatability and gleason score prediction.Magn Reson Med2017
28194955Luminometric Label Array for Counting and Differentiation of Bacteria.Anal Chem2017
28988802A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines.Cell Syst2017
28764102Assessment of metal ion concentration in water with structured feature selection.Chemosphere2017
28838273Switching maintenance infliximab therapy to biosimilar infliximab in inflammatory bowel disease patients.Scand J Gastroenterol2017
28787438Computational-experimental approach to drug-target interaction mapping: A case study on kinase inhibitors.PLoS Comput Biol2017
27864015Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open clinical trial data.Lancet Oncol2017
26900011Comparison of automatic summarisation methods for clinical free text notes.Artif Intell Med2016
27362289Circulating Cytokines Predict the Development of Insulin Resistance in a Prospective Finnish Population Cohort.J Clin Endocrinol Metab2016
27086705Luminometric Label Array for Quantification and Identification of Metal Ions.Anal Chem2016
24723570Toward more realistic drug-target interaction predictions.Brief Bioinform2015
26220861Diffusion-weighted imaging of prostate cancer: effect of b-value distribution on repeatability and cancer characterization.Magn Reson Imaging2015
25329932Mathematical models for diffusion-weighted imaging of prostate cancer using b values up to 2000 s/mm(2) : correlation with Gleason score and repeatability of region of interest analysis.Magn Reson Med2015
24726853Predicting patient acuity from electronic patient records.J Biomed Inform2014
26357052Identification of Functionally Related Enzymes by Learning-to-Rank Methods.IEEE/ACM Trans Comput Biol Bioinform2014
25393026Regularized machine learning in the genetic prediction of complex traits.PLoS Genet2014
25339087High performance pattern matching on heterogeneous platform.J Integr Bioinform2014
23448398Genetic variants and their interactions in disease risk prediction - machine learning and network perspectives.BioData Min2013
22551170Wrapper-based selection of genetic features in genome-wide association studies through fast matrix operations.Algorithms Mol Biol2012
19025688All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning.BMC Bioinformatics2008
17084481Inspiratory flow shape clustering: an automated method to monitor upper airway performance during sleep.Comput Methods Programs Biomed2007
17309051Computer-assisted identification of multitrace electrophoretic patterns in differential display experiments.Electrophoresis2007
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Collaborators

Antti Airola
University of Turku
Co-authored papers 22
Tero Aittokallio
Institute for Molecular Medicine Finland (FIMM), University of Helsinki
Co-authored papers 14
Tapio Salakoski
University of Turku
Co-authored papers 10
Sanna Salanter??
60654University of Turku
Co-authored papers 6
Filip Ginter
University of Turku
Co-authored papers 3
Gustavo Stolovitzky
IBM T.J. Watson Research Center
Co-authored papers 2
Peddinti Gopalacharyulu
Technical Research Centre of Finland
Co-authored papers 2
Krister Wennerberg
University of Copenhagen
Co-authored papers 2
Yang Xie
Quantitative Biomedical Research Center
Co-authored papers 2
Suleiman A Khan
Helsinki Institute for Information Technology (HIIT), Aalto University
Co-authored papers 2
Hanna Suominen
Australian National University, University of Turku
Co-authored papers 2
Tao Wang
University of Texas Southwestern Medical Center
Co-authored papers 2
Jing Tang
University of Helsinki
Co-authored papers 2
Thea Norman
Bill & Melinda Gates Foundation
Co-authored papers 2
Guanghua Xiao
The University of Texas Southwestern Medical Center
Co-authored papers 1
Yulia Newton
University of California, Santa Cruz Genomics Institute
Co-authored papers 1
Olli T Raitakari
Co-authored papers 1
Masayuki Karasuyama
Nagoya Institute of Technology
Co-authored papers 1
Alden Deran
University of California Santa Cruz
Co-authored papers 1
Jesse S Boehm
Broad Institute of Harvard and MIT
Co-authored papers 1
Sirpa Jalkanen
Co-authored papers 1
Yuanfang Guan
University of Michigan ann arbor
Co-authored papers 1
Vladislav Uzunangelov
University of California
Co-authored papers 1
Elias Chaibub Neto
University of Wisconsin-Madison.
Co-authored papers 1
Barbara A Weir
Janssen Research and Development LLC
Co-authored papers 1
Daniel Marbach
Roche Pharma Research and Early Development
Co-authored papers 1
Thomas Yu
Co-authored papers 1
Samuel Kaski
Aalto University
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Adrian Bivol
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