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Author Details

Alan K Jarmusch
2013
61
28
PMIDPaper TitleJournal TitlePublished Year
38052229Reverse metabolomics for the discovery of chemical structures from humans.Nature2024
37524076Signal Response Evaluation Applied to Untargeted Mass Spectrometry Data to Improve Data Interpretability.J Am Soc Mass Spectrom2023
37853256Author Correction: Enhancing untargeted metabolomics using metadata-based source annotation.Nat Biotechnol2023
37910202Non-targeted chemical analysis of consumer botanical products labeled as blue cohosh (Caulophyllum thalictroides), goldenseal (Hydrastis canadensis), or yohimbe bark (Pausinystalia yohimbe) by NMR and MS.2023
37371096Ferroptosis-Mediated Cell Death Induced by NCX4040, The Non-Steroidal Nitric Oxide Donor, in Human Colorectal Cancer Cells: Implications in Therapy.Cells2023
34552265Mass spectrometry-based metabolomics in microbiome investigations.Nature Reviews Microbiology2022
35881585Non-invasive skin sampling detects systemically administered drugs in humans.PLoS ONE2022
35802808Baseline microbiome and metabolome are associated with response to ITIS diet in an exploratory trial in patients with rheumatoid arthritis.Clin Transl Med2022
35798960Enhancing untargeted metabolomics using metadata-based source annotation.Nat Biotechnol2022
36563038Multifactor Quality and Safety Analysis of Antimicrobial Drugs Sold by Online Pharmacies That Do Not Require a Prescription: Multiphase Observational, Content Analysis, and Product Evaluation Study.JMIR Public Health Surveill2022
34862502GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser.Nat Methods2022
34793633Physicochemical properties determining drug detection in skin.Clin Transl Sci2022
34533933Chemical Proportionality within Molecular Networks.Anal Chem2021
33853672Assessment of the microbiome during bacteriophage therapy in combination with systemic antibiotics to treat a case of staphylococcal device infection.Microbiome2021
33959897Contribution of the Gut Microbiome to Drug Disposition, Pharmacokinetic and Pharmacodynamic Variability.Clinical Pharmacokinetics2021
34158495Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment.Nature Communications2021
33026068Gastrointestinal Surgery for Inflammatory Bowel Disease Persistently Lowers Microbiome and Metabolome Diversity.Inflamm Bowel Dis2021
34612288Advancements in capturing and mining mass spectrometry data are transforming natural products research.Natural Product Reports2021
32839597Feature-based molecular networking in the GNPS analysis environment.Nat Methods2020
31953714Mammalian ovarian lipid distributions by desorption electrospray ionization-mass spectrometry (DESI-MS) imaging.Analytical and Bioanalytical Chemistry2020
31894142Mass spectrometry searches using MASST.Nat Biotechnol2020
32405051Reproducible molecular networking of untargeted mass spectrometry data using GNPS.Nat Protoc2020
31565774Ambient Lipidomic Analysis of Single Mammalian Oocytes and Preimplantation Embryos Using Desorption Electrospray Ionization (DESI) Mass Spectrometry.Methods in Molecular Biology2020
31930757Protocol for community-created public MS/MS reference spectra within the Global Natural Products Social Molecular Networking infrastructure.Rapid Communications in Mass Spectrometry2020
32216086Enhanced Characterization of Drug Metabolism and the Influence of the Intestinal Microbiome: A Pharmacokinetic, Microbiome, and Untargeted Metabolomics Study.Clin Transl Sci2020
32817384Microbe-Metabolite Associations Linked to the Rebounding Murine Gut Microbiome Postcolonization with Vancomycin-Resistant Enterococcus faecium.mSystems2020
32807955ReDU: a framework to find and reanalyze public mass spectrometry data.Nat Methods2020
33024048Evaluating Organism-Wide Changes in the Metabolome and Microbiome following a Single Dose of Antibiotic.mSystems2020
31341288Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.Nat Biotechnol2019
30267361Computational Removal of Undesired Mass Spectral Features Possessing Repeat Units via a Kendrick Mass Filter.Journal of the American Society for Mass Spectrometry2019
31076607Metabolites and Lipids Associated with Fetal Swine Anatomy via Desorption Electrospray Ionization - Mass Spectrometry Imaging.Scientific Reports2019
31074958Initial Development toward Non-Invasive Drug Monitoring via Untargeted Mass Spectrometric Analysis of Human Skin.Analytical Chemistry2019
31399723Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.Nat Biotechnol2019
29078250Feasibility of desorption electrospray ionization mass spectrometry for diagnosis of oral tongue squamous cell carcinoma.Rapid Communications in Mass Spectrometry2018
30112439Fatty Acid Patterns Detected By Ambient Ionization Mass Spectrometry in Canine Invasive Urothelial Carcinoma From Dogs of Different Breeds.Bladder Cancer2018
29674054Direct ion generation from swabs.Talanta2018
28112301Utility of neurological smears for intrasurgical brain cancer diagnostics and tumour cell percentage by DESI-MS.Analyst2017
28984323Analysis of human gliomas by swab touch spray-mass spectrometry: applications to intraoperative assessment of surgical margins and presence of oncometabolites.Analyst2017
28628333Coupling Targeted and Untargeted Mass Spectrometry for Metabolome-Microbiome-Wide Association Studies of Human Fecal Samples.Anal Chem2017
28877920N-Acetylaspartate and 2-Hydroxyglutarate Assessed in Human Brain Tissue by Mass Spectrometry as Neuronal Markers of Oncogenesis.Clinical Chemistry2017
28656689Multiple reaction monitoring (MRM)-profiling for biomarker discovery applied to human polycystic ovarian syndrome.Rapid Communications in Mass Spectrometry2017
28607048Intraoperative assessment of tumor margins during glioma resection by desorption electrospray ionization-mass spectrometry.Proc Natl Acad Sci U S A2017
28086192From single cells to our planet-recent advances in using mass spectrometry for spatially resolved metabolomics.Current Opinion in Chemical Biology2017
27658243Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization - Mass Spectrometry Imaging.PLoS One2016
26787885Lipid and metabolite profiles of human brain tumors by desorption electrospray ionization-MS.Proc Natl Acad Sci U S A2016
27120110Lipid dynamics in zebrafish embryonic development observed by DESI-MS imaging and nanoelectrospray-MS.Molecular BioSystems2016
27206411Ambient ionization mass spectrometric analysis of human surgical specimens to distinguish renal cell carcinoma from healthy renal tissue.Analytical and Bioanalytical Chemistry2016
26467505Ambient Ionization Mass Spectrometry for Point-of-Care Diagnostics and Other Clinical Measurements.Clinical Chemistry2016
26340558Comparison of electrospray ionization and atmospheric pressure photoionization liquid chromatography mass spectrometry methods for analysis of ergot alkaloids from endophyte-infected sleepygrass (Achnatherum robustum).J Pharm Biomed Anal2016
26236993Characteristic lipid profiles of canine non-Hodgkin's lymphoma from surgical biopsy tissue sections and fine needle aspirate smears by desorption electrospray ionization--mass spectrometry.Analyst, The2015
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