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Author Details

Narmada Thanki
1988
40
28
PMIDPaper TitleJournal TitlePublished Year
36477806The conserved domain database in 2023.Nucleic Acids Res2023
36350672InterPro in 2022.Nucleic Acids Res2023
33270901RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation.Nucleic Acids Res2021
33156333The InterPro protein families and domains database: 20 years on.Nucleic Acids Res2021
31777944CDD/SPARCLE: the conserved domain database in 2020.Nucleic Acids Res2020
31267135PubMed Text Similarity Model and its application to curation efforts in the Conserved Domain Database.Database (Oxford)2019
30398656InterPro in 2019: improving coverage, classification and access to protein sequence annotations.Nucleic Acids Res2019
29112715RefSeq: an update on prokaryotic genome annotation and curation.Nucleic Acids Res2018
27899635InterPro in 2017-beyond protein family and domain annotations.Nucleic Acids Res2017
27899674CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.Nucleic Acids Res2017
25414356CDD: NCBI's conserved domain database.Nucleic Acids Res2015
23197659CDD: conserved domains and protein three-dimensional structure.Nucleic Acids Res2013
21109532CDD: a Conserved Domain Database for the functional annotation of proteins.Nucleic Acids Res2011
18984618CDD: specific functional annotation with the Conserved Domain Database.Nucleic Acids Res2009
17135202CDD: a conserved domain database for interactive domain family analysis.Nucleic Acids Res2007
16426077Evaluating chemical structure similarity as an indicator of cellular growth inhibition.Journal of Chemical Information and Modeling2006
15778971Linking tumor cell cytotoxicity to mechanism of drug action: an integrated analysis of gene expression, small-molecule screening and structural databases.Proteins: Structure, Function and Bioinformatics2005
16103895Linking pathway gene expressions to the growth inhibition response from the National Cancer Institute's anticancer screen and drug mechanism of action.Pharmacogenomics Journal2005
12657727Molecular classification of cancer: unsupervised self-organizing map analysis of gene expression microarray data.Molecular Cancer Therapeutics2003
14593711Mining the NCI screening database: explorations of agents involved in cell cycle regulation.Prog Cell Cycle Res2003
12112691Crystal structure of the YjeE protein from Haemophilus influenzae: a putative Atpase involved in cell wall synthesis.Proteins: Structure, Function and Bioinformatics2002
12037327The Protein Data Bank.Acta Crystallogr D Biol Crystallogr2002
11752306The Protein Data Bank: unifying the archive.Nucleic Acids Res2002
12570740Assisting functional assignment for hypothetical Heamophilus influenzae gene products through structural genomics.Curr Drug Targets Infect Disord2002
11125095The PDB data uniformity project.Nucleic Acids Res2001
10591103The crystal structure of triosephosphate isomerase (TIM) from Thermotoga maritima: a comparative thermostability structural analysis of ten different TIM structures.Proteins: Structure, Function and Bioinformatics1999
9089815Protein engineering with monomeric triosephosphate isomerase (monoTIM): the modelling and structure verification of a seven-residue loop.Protein Eng1997
15299859Structure of monellin refined to 2.3 a resolution in the orthorhombic crystal form.Acta Crystallogr D Biol Crystallogr1997
9245397A double mutation at the tip of the dimer interface loop of triosephosphate isomerase generates active monomers with reduced stability.Biochemistry1997
8745400Active site properties of monomeric triosephosphate isomerase (monoTIM) as deduced from mutational and structural studies.Protein Science1996
7619809Structural studies on the PH domains of Db1, Sos1, IRS-1, and beta ARK1 and their differential binding to G beta gamma subunits.Biochemistry1995
7499222Structural role of extracellular domain 1 of alpha-platelet-derived growth factor (PDGF) receptor for PDGF-AA and PDGF-BB binding.J Biol Chem1995
7857921A divalent metal ion binding site in the kinase insert domain of the alpha-platelet-derived growth factor receptor regulates its association with SH2 domains.Biochemistry1995
8591044Three new crystal structures of point mutation variants of monoTIM: conformational flexibility of loop-1, loop-4 and loop-8.Structure1995
8292602Comparison of calcium-dependent conformational changes in the N-terminal SH2 domains of p85 and GAP defines distinct properties for SH2 domains.Biochemistry1994
1287652Hydration of amino acid side chains: dependence on secondary structure.1992
1304383Crystal structure of a complex of HIV-1 protease with a dihydroxyethylene-containing inhibitor: comparisons with molecular modeling.Protein Science1992
1920440Analysis of protein main-chain solvation as a function of secondary structure.Journal of Molecular Biology1991
2115163Influence of secondary structure on the hydration of serine, threonine and tyrosine residues in proteins.1990
3172231Distributions of water around amino acid residues in proteins.Journal of Molecular Biology1988
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