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Author Details

Jason M Brenchley
National Institute of Allergy and Infectious Diseases, National Institutes of Health
2000
195
76
Sarah J Ratcliffe (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
38048388Ongoing production of tissue-resident macrophages from hematopoietic stem cells in healthy adult macaques.Blood Adv2024
36848230Experimental bacterial dysbiosis with consequent immune alterations increase intrarectal SIV acquisition susceptibility.Cell Rep2023
37425787The Host Adapted Fungal Pathogens of <i>Pneumocystis</i> Genus Utilize Genic Regional Centromeres.bioRxiv2023
37075022Correction: Mitigation of endemic GI-tract pathogen-mediated inflammation through development of multimodal treatment regimen and its impact on SIV acquisition in rhesus macaques.PLoS Pathog2023
373383422-Hydroxypropyl-β-Cyclodextrin Treatment Induces Modest Immune Activation in Healthy Rhesus Macaques.J Virol2023
37129981Selective IgA2 deficiency in a patient with small intestinal Crohn's disease.J Clin Invest2023
36997122sCD14 and Intestinal Fatty Acid Binding Protein Are Elevated in the Serum of Patients With Idiopathic Anaphylaxis.J Allergy Clin Immunol Pract2023
36813761Prolonged experimental CD4<sup>+</sup> T-cell depletion does not cause disease progression in SIV-infected African green monkeys.Nat Commun2023
36475838Host Genetics and Environment Shape the Composition of the Gastrointestinal Microbiome in Nonhuman Primates.Microbiol Spectr2023
34969255A Summary of the Sixth International Workshop on Microbiome in HIV Pathogenesis, Prevention, and Treatment.AIDS Res Hum Retroviruses2022
35649361CD4 T cells are rapidly depleted from tuberculosis granulomas following acute SIV co-infection.Cell Rep2022
35797339Multiple modes of antigen exposure induce clonotypically diverse epitope-specific CD8+ T cells across multiple tissues in nonhuman primates.PLoS Pathog2022
35523797Butyrate administration is not sufficient to improve immune reconstitution in antiretroviral-treated SIV-infected macaques.Sci Rep2022
35750337Epigenetic Reprogramming Leads to Downregulation of CD4 and Functional Changes in African Green Monkey Memory CD4<sup>+</sup> T Cells.J Immunol2022
36605190Barcode clonal tracking of tissue-resident immune cells in rhesus macaque highlights distinct clonal distribution pattern of tissue NK cells.Front Immunol2022
35867722The role of CD101-expressing CD4 T cells in HIV/SIV pathogenesis and persistence.PLoS Pathog2022
36172119IL-10 suppresses T cell expansion while promoting tissue-resident memory cell formation during SARS-CoV-2 infection in rhesus macaques.bioRxiv2022
36032119I've looked at gut from both sides now: Gastrointestinal tract involvement in the pathogenesis of SARS-CoV-2 and HIV/SIV infections.Front Immunol2022
36028574mTOR regulation of metabolism limits LPS-induced monocyte inflammatory and procoagulant responses.Commun Biol2022
35976997The systemic anti-microbiota IgG repertoire can identify gut bacteria that translocate across gut barrier surfaces.Sci Transl Med2022
33259149A study of microbial translocation markers in mastocytosis.Clin Exp Allergy2021
33686174Genomic insights into the host specific adaptation of the Pneumocystis genus.Commun Biol2021
33731830Luminal microvesicles uniquely influence translocating bacteria after SIV infection.Mucosal Immunol2021
33861500FRugally Optimized DNA Octomer (FRODO) qPCR Measurement of HIV and SIV in Human and Nonhuman Primate Samples.Curr Protoc2021
34888397A Randomized, Placebo-Controlled Trial Assessing the Effect of VISBIOME ES Probiotic in People With HIV on Antiretroviral Therapy.Open Forum Infect Dis2021
34735686Microbiome Studies in Non-human Primates.Curr HIV/AIDS Rep2021
34756073The Vaginal Microbiome of Nonhuman Primates Can Be Only Transiently Altered to Become <i>Lactobacillus</i> Dominant without Reducing Inflammation.Microbiol Spectr2021
34449812Increased homeostatic cytokines and stability of HIV-infected memory CD4 T-cells identify individuals with suboptimal CD4 T-cell recovery on-ART.PLoS Pathog2021
34237254Translocated microbiome composition determines immunological outcome in treated HIV infection.Cell2021
33970966Mitigation of endemic GI-tract pathogen-mediated inflammation through development of multimodal treatment regimen and its impact on SIV acquisition in rhesus macaques.PLoS Pathog2021
33351785TCF-1 regulates HIV-specific CD8+ T cell expansion capacity.JCI Insight2021
32127451Diversity and Complexity of the Large Surface Protein Family in the Compacted Genomes of Multiple <i>Pneumocystis</i> Species.mBio2020
31661461SIV-specific CD8+ T cells are clonotypically distinct across lymphoid and mucosal tissues.J Clin Invest2020
32014111Discovery of several thousand highly diverse circular DNA viruses.Elife2020
32066947HIV-1-induced cytokines deplete homeostatic innate lymphoid cells and expand TCF7-dependent memory NK cells.Nat Immunol2020
33115950Nonhuman primates exposed to Zika virus in utero are not protected against reinfection at 1 year postpartum.Sci Transl Med2020
32777940A Summary of the Fifth Annual Virology Education HIV Microbiome Workshop.AIDS Res Hum Retroviruses2020
33006329Corrigendum to: Impact of Acute HIV Infection and Early Antiretroviral Therapy on the Human Gut Microbiome.Open Forum Infect Dis2020
32841214Epigenetic silencing of CD4 expression in nonpathogenic SIV infection in African green monkeys.JCI Insight2020
32282850Fatal progression of experimental visceral leishmaniasis is associated with intestinal parasitism and secondary infection by commensal bacteria, and is delayed by antibiotic prophylaxis.PLoS Pathog2020
32426577Biomarkers of Cellular Stress Do Not Associate with sCD14 in Progressive HIV and SIV Infections <i>in Vivo</i>.Pathog Immun2020
32317323Simian Immunodeficiency Virus-Infected Memory CD4<sup>+</sup> T Cells Infiltrate to the Site of Infected Macrophages in the Neuroparenchyma of a Chronic Macaque Model of Neurological Complications of AIDS.mBio2020
31104270Innate Lymphoid Cells: Their Contributions to Gastrointestinal Tissue Homeostasis and HIV/SIV Disease Pathology.Curr HIV/AIDS Rep2019
31796542Simian Immunodeficiency Virus Infection of Rhesus Macaques Results in Delayed Zika Virus Clearance.mBio2019
33324725Impact of Acute HIV Infection and Early Antiretroviral Therapy on the Human Gut Microbiome.Open Forum Infect Dis2019
31270225Antiretroviral Therapy Administration in Healthy Rhesus Macaques Is Associated with Transient Shifts in Intestinal Bacterial Diversity and Modest Immunological Perturbations.J Virol2019
30787150Simian Immunodeficiency Virus Infects Functionally Polarized Memory CD4 T Cells Equivalently <i>In Vivo</i>.J Virol2019
29028666Microbial translocation: translating simian immunodeficiency virus to HIV.Curr Opin HIV AIDS2018
30186879Type I/II Interferon in HIV-1-Infected Patients: Expression in Gut Mucosa and in Peripheral Blood Mononuclear Cells and Its Modification upon Probiotic Supplementation.J Immunol Res2018
30061696Experimental microbial dysbiosis does not promote disease progression in SIV-infected macaques.Nat Med2018
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Collaborators

Jacob D Estes
Vaccine and Gene Therapy Institute, Oregon Health & Science University
Co-authored papers 30
Jeffrey D Lifson
Frederick National Laboratory
Co-authored papers 12
Yasmine Belkaid
National Institute of Allergy and Infectious Diseases
Co-authored papers 12
Steven G Deeks
University of California san francisco
Co-authored papers 9
Steven E Bosinger
Co-authored papers 7
Michael M Lederman
Co-authored papers 7
Jeffrey N Martin
Co-authored papers 7
Ivan Vujkovic-Cvijin
Cedars-Sinai Medical Center, USA F. Widjaja Inflammatory Bowel Disease Institute
Co-authored papers 6
Fan Wu
Co-authored papers 6
Peter W Hunt
Co-authored papers 6
Louis J Picker
Vaccine and Gene Therapy Institute, Oregon Health & Science University
Co-authored papers 5
Mark Connors
National Institute of Allergy and Infectious Diseases, National Institutes of Health
Co-authored papers 5
Frederick M Hecht
Co-authored papers 5
Nicolas Bouladoux
National Institute of Allergy and Infectious Diseases
Co-authored papers 4
Margery Smelkinson
National Institute of Allergy and Infectious Diseases.
Co-authored papers 4
Ronald G Collman
University of Pennsylvania School of Medicine
Co-authored papers 4
Oliver J Harrison
University Hospital Southampton
Co-authored papers 4
Brandon F Keele
Co-authored papers 4
Seong-Ji Han
National Institute of Allergy and Infectious Diseases
Co-authored papers 4
Stephen A Migueles
National Institute of Allergy and Infectious Diseases, National Institutes of Health
Co-authored papers 4
Allyson L Byrd
Genentech Inc.
Co-authored papers 4
Rafick-Pierre Sekaly
Pathology Advanced Translational Research Unit, Emory University School of Medicine
Co-authored papers 4
Elizabeth Sinclair
Co-authored papers 3
Giorgio Trinchieri
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Co-authored papers 3
Alessandro Sette
Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology
Co-authored papers 3
John J O'Shea
National Institute of Arthritis, National Institutes of Health
Co-authored papers 3
Joshua D Milner
Columbia University
Co-authored papers 3
Amiran Dzutsev
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Co-authored papers 2
Ian Frank
IF School of Medicine, University of Pennsylvania
Co-authored papers 2
Dan H Barouch
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Release 1.2