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Author Details

Shamira J Shallom
Clinical Center
1998
28
16
PMIDPaper TitleJournal TitlePublished Year
37221835Evolution of <i>Mycobacterium abscessus</i> in the human lung: Cumulative mutations and genomic rearrangement of porin genes in patient isolates.Virulence2023
35313731Detection of Mixed Populations of Clarithromycin-Susceptible and -Resistant Mycobacterium abscessus Strains.J Clin Microbiol2022
36197094Disulfiram Is Effective against Drug-Resistant Mycobacterium abscessus in a Zebrafish Embryo Infection Model.Antimicrob Agents Chemother2022
33356838Tissue specific diversification, virulence and immune response to <i>Mycobacterium bovis</i> BCG in a patient with an IFN-γ R1 deficiency.Virulence2020
31149626Amikacin exposure and susceptibility of macrolide-resistant <i>Mycobacterium abscessus</i>.ERJ Open Res2019
31807607Patients with Idiopathic Pulmonary Nontuberculous Mycobacterial Disease Have Normal Th1/Th2 Cytokine Responses but Diminished Th17 Cytokine and Enhanced Granulocyte-Macrophage Colony-Stimulating Factor Production.Open Forum Infect Dis2019
28915071Transcriptional Response of Respiratory Epithelium to Nontuberculous Mycobacteria.Am J Respir Cell Mol Biol2018
26292297Clonal Diversification and Changes in Lipid Traits and Colony Morphology in Mycobacterium abscessus Clinical Isolates.J Clin Microbiol2015
26269619New Real-Time PCR Assays for Detection of Inducible and Acquired Clarithromycin Resistance in the Mycobacterium abscessus Group.J Clin Microbiol2015
24460437Inhaled amikacin for treatment of refractory pulmonary nontuberculous mycobacterial disease.Ann Am Thorac Soc2014
24565502High-level relatedness among Mycobacterium abscessus subsp. massiliense strains from widely separated outbreaks.Emerg Infect Dis2014
23804391New rapid scheme for distinguishing the subspecies of the Mycobacterium abscessus group and identifying Mycobacterium massiliense isolates with inducible clarithromycin resistance.J Clin Microbiol2013
22275106Complete genome sequence of Brucella suis VBI22, isolated from bovine milk.J Bacteriol2012
22967795Improved variation calling via an iterative backbone remapping and local assembly method for bacterial genomes.Genomics2012
22967710Comparison of genome diversity of Brucella spp. field isolates using Universal Bio-signature Detection Array and whole genome sequencing reveals limitations of current diagnostic methods.Gene2012
21447378Investigating the genome diversity of B. cereus and evolutionary aspects of B. anthracis emergence.Genomics2011
22038969Revised genome sequence of Brucella suis 1330.J Bacteriol2011
21672191A species independent universal bio-detection microarray for pathogen forensics and phylogenetic classification of unknown microorganisms.BMC Microbiol2011
20400544Host-interactive genes in Amerindian Helicobacter pylori diverge from their Old World homologs and mediate inflammatory responses.J Bacteriol2010
17703947A correlation analysis of protein characteristics associated with genome-wide high throughput expression and solubility of Streptococcus pneumoniae proteins.Protein Expr Purif2007
15994558Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes.Science2005
14679236Formation and composition of the Bacillus anthracis endospore.J Bacteriol2004
12368865Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii.Nature2002
12270624Functional characterization of the acyl carrier protein (PfACP) and beta-ketoacyl ACP synthase III (PfKASIII) from Plasmodium falciparum.Mol Biochem Parasitol2002
12368864Genome sequence of the human malaria parasite Plasmodium falciparum.Nature2002
12368868Sequence of Plasmodium falciparum chromosomes 2, 10, 11 and 14.Nature2002
10608839Essential protein-protein interactions between Plasmodium falciparum thymidylate synthase and dihydrofolate reductase domains.J Biol Chem1999
9804551Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum.Science1998
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Collaborators

Claire M Fraser
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 6
Malcolm J Gardner
J. Craig Venter Institute
Co-authored papers 6
Mihaela Pertea
Center for Computational Biology, Johns Hopkins University
Co-authored papers 5
Steven L Salzberg
Center for Computational Biology, Johns Hopkins University
Co-authored papers 5
J C Venter
The J. Craig Venter Institute
Co-authored papers 5
Owen White
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 5
Bernard Suh
Center for Biomolecular Science and Engineering, University of California
Co-authored papers 4
Daniel J Carucci
US Military Malaria Vaccine Program, Naval Medical Research Center
Co-authored papers 4
Stephen L Hoffman
Inc., 9800 Medical Center Drive
Co-authored papers 4
Jonathan E Allen
The Institute for Genomic Research
Co-authored papers 4
Jane M Carlton
Center for Genomics and Systems Biology
Co-authored papers 4
Leda M Cummings
Institute for Genome Research
Co-authored papers 4
Samuel V Angiuoli
Personal Genome Diagnostics Inc.
Co-authored papers 4
Vishvanath Nene
International Livestock Research Institute (ILRI)
Co-authored papers 3
Hamilton O Smith
J. Craig Venter Institute
Co-authored papers 3
Jeremy Peterson
The Institute for Genomic Research, 9712 Medical Center Drive
Co-authored papers 3
Jeremy D Selengut
Craig Venter Institute, 9704 Medical Center Drive
Co-authored papers 3
Ian T Paulsen
Macquarie University
Co-authored papers 2
Arnab Pain
King Abdullah University of Science and Technology
Co-authored papers 2
Mark D Adams
Case Western Reserve University School of Medicine
Co-authored papers 2
Akhil B Vaidya
Center for Molecular Parasitology, Drexel University College of Medicine
Co-authored papers 2
John R Yates
TheScripps Research Institute
Co-authored papers 2
Neil Hall
Earlham Institute
Co-authored papers 2
Stuart A Ralph
Bio21 Molecular Science and Biotechnology Institute, University of Melbourne
Co-authored papers 2
Matthew Berriman
Wellcome Sanger Institute
Co-authored papers 2
Carmen C Brewer
Co-authored papers 1
Michael W Mather
Center for Molecular Parasitology, Drexel University College of Medicine
Co-authored papers 1
John Quackenbush
Harvard T. H. Chan School of Public Health
Co-authored papers 1
David M A Martin
University of Dundee
Co-authored papers 1
David S Roos
University of Pennsylvania
Co-authored papers 1
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