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Author Details

Benjamin E Gross
Memorial Sloan Kettering Cancer Center
2006
16
15
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
35148171Genome Nexus: A Comprehensive Resource for the Annotation and Interpretation of Genomic Variants in Cancer.JCO Clin Cancer Inform2022
33625877OncoTree: A Cancer Classification System for Precision Oncology.JCO Clin Cancer Inform2021
31647099Pathway Commons 2019 Update: integration, analysis and exploration of pathway data.Nucleic Acids Res2020
29122777Genetic Predictors of Response to Systemic Therapy in Esophagogastric Cancer.Cancer Discov2018
29664468Unifying cancer and normal RNA sequencing data from different sources.Sci Data2018
29625050Oncogenic Signaling Pathways in The Cancer Genome Atlas.Cell2018
28777785Erratum: Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients.Nat Med2017
28481359Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients.Nat Med2017
29220450CTD2 Dashboard: a searchable web interface to connect validated results from the Cancer Target Discovery and Development Network.Database (Oxford)2017
23550210Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal.Sci Signal2013
24068901Using biological pathway data with paxtools.PLoS Comput Biol2013
23685749The mutational landscape of adenoid cystic carcinoma.Nat Genet2013
22588877The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data.Cancer Discov2012
21071392Pathway Commons, a web resource for biological pathway data.Nucleic Acids Res2011
17947979Integration of biological networks and gene expression data using Cytoscape.Nat Protoc2007
17101041cPath: open source software for collecting, storing, and querying biological pathways.BMC Bioinformatics2006
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Collaborators

Nikolaus Schultz
Memorial Sloan Kettering Cancer Center
Co-authored papers 11
Chris Sander
Broad Institute of MIT and Harvard
Co-authored papers 10
Jianjiong Gao
Memorial Sloan Kettering Cancer Center
Co-authored papers 9
Ethan Cerami
Dana-Farber Cancer Institute
Co-authored papers 7
Ang??lica Ochoa-Avil??s
University of Cuenca
Co-authored papers 6
Zachary J Heins
Boston University
Co-authored papers 5
Gary D Bader
University of Toronto
Co-authored papers 5
Bülent Arman Aksoy
Co-authored papers 5
Hongxin Zhang
Memorial Sloan Kettering Cancer Center
Co-authored papers 5
Ritika Kundra
Memorial Sloan Kettering Cancer Center
Co-authored papers 5
Debyani Chakravarty
Memorial Sloan Kettering Cancer Center
Co-authored papers 4
Selcuk Onur Sumer
Co-authored papers 4
Luc G T Morris
Memorial Sloan Kettering Cancer Center
Co-authored papers 4
Barry S Taylor
Memorial Sloan Kettering Cancer Center
Co-authored papers 4
Ugur Dogrusoz
Bilkent University
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Michael F Berger
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Ozgun Babur
Houston Methodist Research Institute
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Marc Ladanyi
Memorial Sloan Kettering Cancer Center
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Abraham Ari Hakimi
Co-authored papers 3
Emek Demir
Knight Cancer Institute, Oregon Health & Science University
Co-authored papers 3
Gregory J Riely
Memorial Sloan Kettering Cancer Center
Co-authored papers 2
Augustin Luna
Harvard Medical School
Co-authored papers 2
Cyriac Kandoth
University of California los angeles
Co-authored papers 2
Francisco Vega
The University of Texas MD Anderson Cancer Center
Co-authored papers 2
Rileen Sinha
Co-authored papers 2
Wassim Abida
Memorial Sloan Kettering Cancer Center
Co-authored papers 2
Niedzica Camacho
Memorial Sloan Kettering Cancer Center
Co-authored papers 2
Yichao Sun
Co-authored papers 2
José Baselga
Co-authored papers 2
Erik Larsson
Co-authored papers 2
Release 1.2