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Author Details

Maxat Kulmanov
King Abdullah University of Science and Technology.
2017
18
11
PMIDPaper TitleJournal TitlePublished Year
36534832mOWL: Python library for machine learning with biomedical ontologies.Bioinformatics2023
37577579CAGI6 ID-Challenge: Assessment of phenotype and variant predictions in 415 children with Neurodevelopmental Disorders (NDDs).Res Sq2023
35758802DeepGOZero: improving protein function prediction from sequence and zero-shot learning based on ontology axioms.Bioinformatics2022
33049044Semantic similarity and machine learning with ontologies.Brief Bioinform2021
34019664DeepGOWeb: fast and accurate protein function prediction on the (Semantic) Web.Nucleic Acids Res2021
34009304DeepGOPlus: improved protein function prediction from sequence.Bioinformatics2021
31350877DeepGOPlus: improved protein function prediction from sequence.Bioinformatics2020
33206638DeepPheno: Predicting single gene loss-of-function phenotypes using an ontology-aware hierarchical classifier.PLoS Comput Biol2020
32850499Functional Pangenome Analysis Shows Key Features of E Protein Are Preserved in SARS and SARS-CoV-2.Front Cell Infect Microbiol2020
31160594PathoPhenoDB, linking human pathogens to their phenotypes in support of infectious disease research.Sci Data2019
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
30727941DeepPVP: phenotype-based prioritization of causative variants using deep learning.BMC Bioinformatics2019
29028931DeepGO: predicting protein functions from sequence and interactions using a deep ontology-aware classifier.Bioinformatics2018
30423068Ontology-based validation and identification of regulatory phenotypes.Bioinformatics2018
30279426OligoPVP: Phenotype-driven analysis of individual genomic information to prioritize oligogenic disease variants.Sci Rep2018
28729549DES-TOMATO: A Knowledge Exploration System Focused On Tomato Species.Sci Rep2017
28193260Evaluating the effect of annotation size on measures of semantic similarity.J Biomed Semantics2017
28414800Semantic prioritization of novel causative genomic variants.PLoS Comput Biol2017
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Collaborators

Robert Hoehndorf
King Abdullah University of Science and Technology
Co-authored papers 17
Paul N Schofield
University of Cambridge
Co-authored papers 5
Imane Boudellioua
King Fahd University of Petroleum and Minerals
Co-authored papers 4
Georgios V Gkoutos
Institute of Cancer and Genomic Sciences, University of Birmingham
Co-authored papers 4
Olivier Lichtarge
Baylor College of Medicine
Co-authored papers 2
Silvio C E Tosatto
University of Padova
Co-authored papers 2
Damiano Piovesan
University of Padova
Co-authored papers 2
Sean D Mooney
University of Washington
Co-authored papers 2
Pier Luigi Martelli
Department of Pharmacy and Biotechnology, University of Bologna
Co-authored papers 2
Vladimir B Bajic
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 2
Rita Casadio
Department of Pharmacy and Biotechnology, University of Bologna
Co-authored papers 2
Naihui Zhou
The First Affiliated Hospital of Soochow University
Co-authored papers 1
Sa??o D??eroski
Jozef Stefan Institute
Co-authored papers 1
Domenico Cozzetto
Imperial College London
Co-authored papers 1
Marco Mesiti
Universita degli Studi di Milano
Co-authored papers 1
Neven Sumonja
Institute of Nuclear Sciences VINCA, University of Belgrade
Co-authored papers 1
Magdalena Kotlicka-Antczak
Medical University of Lodz
Co-authored papers 1
Alan J Medlar
Co-authored papers 1
Rui Fa
University College London
Co-authored papers 1
Xin Gao
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 1
Sabeur Aridhi
Universite de Lorraine, CNRS
Co-authored papers 1
Qizhong Mao
Temple University
Co-authored papers 1
Fabio Fabris
University of Kent
Co-authored papers 1
Wei-Cheng Tseng
Taipei Veterans General Hospital
Co-authored papers 1
Christophe Dessimoz
University of Lausanne
Co-authored papers 1
Gage S Black
Brigham Young University
Co-authored papers 1
Suyang Dai
Fudan University
Co-authored papers 1
Kai Hakala
University of Turku
Co-authored papers 1
Tomislav ??muc
Ruder Boskovic Institute
Co-authored papers 1
Intikhab Alam
College of Life Sciences
Co-authored papers 1
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