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Author Details

James Douglas Armstrong
University of Edinburgh
1995
103
40
PMIDPaper TitleJournal TitlePublished Year
36776967Virtual Fly Brain-An interactive atlas of the <i>Drosophila</i> nervous system.Front Physiol2023
37860105BioNAR: an integrated biological network analysis package in bioconductor.Bioinform Adv2023
38050642Computational Pipeline for Analysis of Biomedical Networks with BioNAR.Curr Protoc2023
36959177Mena regulates nesprin-2 to control actin-nuclear lamina associations, trans-nuclear membrane signalling and gene expression.Nat Commun2023
37035623Longitudinal home-cage automated assessment of climbing behavior shows sexual dimorphism and aging-related decrease in C57BL/6J healthy mice and allows early detection of motor impairment in the N171-82Q mouse model of Huntington's disease.Front Behav Neurosci2023
36699346Synaptome.db: a bioconductor package for synaptic proteomics data.Bioinform Adv2022
33976238A unified resource and configurable model of the synapse proteome and its role in disease.Sci Rep2021
34349214Author Correction: A unified resource and configurable model of the synapse proteome and its role in disease.Sci Rep2021
32438848Temporal dissociation of phencyclidine: Induced locomotor and social alterations in rats using an automated homecage monitoring system - implications for the 3Rs and preclinical drug discovery.J Psychopharmacol2020
30991030Studies on long term behavioural changes in group-housed rat models of brain and spinal cord injury using an automated home cage recording system.J Neurosci Methods2019
31681758Dissecting the Shared and Context-Dependent Pathways Mediated by the p140Cap Adaptor Protein in Cancer and in Neurons.Front Cell Dev Biol2019
30948475Regeneration of Dopaminergic Neurons in Adult Zebrafish Depends on Immune System Activation and Differs for Distinct Populations.J Neurosci2019
29198911Xpert MTB/RIF Ultra for detection of Mycobacterium tuberculosis and rifampicin resistance: a prospective multicentre diagnostic accuracy study.Lancet Infect Dis2018
29915372Monitoring brain activity and behaviour in freely moving Drosophila larvae using bioluminescence.Sci Rep2018
30071621Regional Diversity in the Postsynaptic Proteome of the Mouse Brain.Proteomes2018
28456660Assessing mouse behaviour throughout the light/dark cycle using automated in-cage analysis tools.J Neurosci Methods2018
29614333Pharmacological validation of individual animal locomotion, temperature and behavioural analysis in group-housed rats using a novel automated home cage analysis system: A comparison with the modified Irwin test.J Pharmacol Toxicol Methods2018
29618727Rule-based modelling provides an extendable framework for comparing candidate mechanisms underpinning clathrin polymerisation.Sci Rep2018
29203896Proteomic analysis of postsynaptic proteins in regions of the human neocortex.Nat Neurosci2018
28713243Synaptic Interactome Mining Reveals p140Cap as a New Hub for PSD Proteins Involved in Psychiatric and Neurological Disorders.Front Mol Neurosci2017
28092681Genomic analysis of globally diverse Mycobacterium tuberculosis strains provides insights into the emergence and spread of multidrug resistance.Nat Genet2017
29045836Arc Requires PSD95 for Assembly into Postsynaptic Complexes Involved with Neural Dysfunction and Intelligence.Cell Rep2017
28877172Automated recording of home cage activity and temperature of individual rats housed in social groups: The Rodent Big Brother project.PLoS One2017
28902596Evaluation of a Rapid Molecular Drug-Susceptibility Test for Tuberculosis.N Engl J Med2017
26865685Analytical and Clinical Evaluation of the Epistem Genedrive Assay for Detection of Mycobacterium tuberculosis.J Clin Microbiol2016
27375446Analysis of Individual Mouse Activity in Group Housed Animals of Different Inbred Strains using a Novel Automated Home Cage Analysis System.Front Behav Neurosci2016
27159505A Phase 2 Randomized Trial of a Rifapentine plus Moxifloxacin-Based Regimen for Treatment of Pulmonary Tuberculosis.PLoS One2016
27069252Functional characterisation of human synaptic genes expressed in the Drosophila brain.Biol Open2016
26856319Fluid consumption and taste novelty determines transcription temporal dynamics in the gustatory cortex.Mol Brain2016
25662454Genetic analysis of Drosophila circadian behavior in seminatural conditions.Methods Enzymol2015
26388333MEK Inhibitors Reverse cAMP-Mediated Anxiety in Zebrafish.Chem Biol2015
26186008Piezo Is Essential for Amiloride-Sensitive Stretch-Activated Mechanotransduction in Larval Drosophila Dorsal Bipolar Dendritic Sensory Neurons.PLoS One2015
26124142Drosophila circadian rhythms in seminatural environments: Summer afternoon component is not an artifact and requires TrpA1 channels.Proc Natl Acad Sci U S A2015
26176604High Genotypic Discordance of Concurrent Mycobacterium tuberculosis Isolates from Sputum and Blood of HIV-Infected Individuals.PLoS One2015
25888317Predictors and outcomes of mycobacteremia among HIV-infected smear- negative presumptive tuberculosis patients in Uganda.BMC Infect Dis2015
25653410Improving the sensitivity of the Xpert MTB/RIF assay on sputum pellets by decreasing the amount of added sample reagent: a laboratory and clinical evaluation.J Clin Microbiol2015
25698741Dynamics of elongation factor 2 kinase regulation in cortical neurons in response to synaptic activity.J Neurosci2015
24100497Sensititre MYCOTB MIC plate for testing Mycobacterium tuberculosis susceptibility to first- and second-line drugs.Antimicrob Agents Chemother2014
25222866Clinical utility of a novel molecular assay in various combination strategies with existing methods for diagnosis of HIV-related tuberculosis in Uganda.PLoS One2014
25294943Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library.Development2014
24808236Prospective cross-sectional evaluation of the small membrane filtration method for diagnosis of pulmonary tuberculosis.J Clin Microbiol2014
24559671A systematic nomenclature for the insect brain.Neuron2014
24637544Comparative performance of urinary lipoarabinomannan assays and Xpert MTB/RIF in HIV-infected individuals.AIDS2014
24675585Diagnostic accuracy of a rapid urine lipoarabinomannan test for tuberculosis in HIV-infected adults.J Acquir Immune Defic Syndr2014
24454279NMDA receptor-dependent regulation of miRNA expression and association with Argonaute during LTP in vivo.Front Cell Neurosci2014
23143269SynSysNet: integration of experimental data on synaptic protein-protein interactions with drug-target relations.Nucleic Acids Res2013
24021382A simulator for spatially extended kappa models.Bioinformatics2013
23658807Metabolic turnover of synaptic proteins: kinetics, interdependencies and implications for synaptic maintenance.PLoS One2013
21698405A model of non-elemental olfactory learning in Drosophila.J Comput Neurosci2012
22904372Consolidation and translation regulation.Learn Mem2012
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Collaborators

Makerere University.
Co-authored papers 11
Co-authored papers 3
University of Sheffield
Co-authored papers 3
European Bioinformatics Institute
Co-authored papers 3
Mary Lyon Centre at Medical Research Council
Co-authored papers 3
the Infectious Diseases Institute, College of Health Sciences, Makerere University
Co-authored papers 3
Flanders Institute for Biotechnology
Co-authored papers 2
Wellcome Sanger Institute
Co-authored papers 2
University of Cambridge
Co-authored papers 2
Co-authored papers 1
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 1
Icahn School of Medicine at Mount Sinai
Co-authored papers 1
The Hospital for Sick Children Research Institute
Co-authored papers 1
University of Cambridge
Co-authored papers 1
Data Science Institute, University of Arizona
Co-authored papers 1
University of Cambridge
Co-authored papers 1
National Institutes of Allergy and Infectious Diseases
Co-authored papers 1
The Wellcome Trust Sanger Institute
Co-authored papers 1
University of Cambridge
Co-authored papers 1
Otto-von-Guericke University of Magdeburg
Co-authored papers 1
Co-authored papers 1
Broad Institute
Co-authored papers 1
Rockefeller University
Co-authored papers 1
Co-authored papers 1
Brigham and Women's Hospital
Co-authored papers 1
Co-authored papers 1
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European Bioinformatics Institute
Co-authored papers 1
University at Buffalo
Co-authored papers 1