Author details

Full Name

Stephen J O'Brien

Affiliation

ORCID

Career Start Year

1971

Papers

771

H Index

118

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36980891	Chromosome-Length Assembly of the Baikal Seal (<i>Pusa sibirica</i>) Genome Reveals a Historically Large Population Prior to Isolation in Lake Baikal.	Genes (Basel)	2023
37599670	A novel video compendium of real surgical patient interactions for medical students.		2023
37919451	Single-haplotype comparative genomics provides insights into lineage-specific structural variation during cat evolution.	Nat Genet	2023
37652999	Ancient DNA reveals genetic admixture in China during tiger evolution.		2023
36797369	The case for the reintroduction of cheetahs to India.		2023
37043058	Chromosome-length genome assemblies and cytogenomic analyses of pangolins reveal remarkable chromosome counts and plasticity.		2023
36788967	Taxonomic species recognition should be consistent.		2022
35701371	A decade of GigaScience: A perspective on conservation genetics.	GigaScience	2022
36085557	The Pioneer Advantage: Filling the blank spots on the map of genome diversity in Europe.	Gigascience	2022
34782459	Genome-wide association study reveals genetic variants associated with HIV-1C infection in a Botswana study population.	Proceedings of the National Academy of Sciences of the United States of America	2021
33911273	Towards complete and error-free genome assemblies of all vertebrate species.	Nature	2021
33848458	African and Asian leopards are highly differentiated at the genomic level.	Current Biology	2021
33736632	Genome-wide association study identifies new loci associated with risk of HBV infection and disease progression.	BMC Medical Genomics	2021
34146095	Draft de novo Genome Assembly of the Elusive Jaguarundi, Puma yagouaroundi.	J Hered	2021
34250173	Return to Sport After Bone-Patellar Tendon-Bone Autograft ACL Reconstruction in High School-Aged Athletes.	Orthopaedic Journal of Sports Medicine	2021
33305796	Ultracontinuous Single Haplotype Genome Assemblies for the Domestic Cat (Felis catus) and Asian Leopard Cat (Prionailurus bengalensis).	J Hered	2021
33141232	Return to Play After Biceps Tenodesis and Transfer in a Young, Athletic Population.	Orthopedics	2021
34671691	Application of Machine Learning Algorithms to Predict Clinically Meaningful Improvement After Arthroscopic Anterior Cruciate Ligament Reconstruction.	Orthopaedic Journal of Sports Medicine	2021
30902755	Genome-wide sequence analyses of ethnic populations across Russia.	Genomics	2020
31743063	A Beautiful Life: High Risk-High Payoff in Genetic Science.	Annual Review of Animal Biosciences	2020
32366643	The evolutionary history of extinct and living lions.	Proc Natl Acad Sci U S A	2020
32297155	New Gene Variants Associated with the Risk of Chronic HBV Infection.		2020
32112099	GADMA: Genetic algorithm for inferring demographic history of multiple populations from allele frequency spectrum data.	GigaScience	2020
32463100	halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments.	Gigascience	2020
33082320	Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines.	Scientific data	2020
33228033	Mapping of Diabetes Susceptibility Loci in a Domestic Cat Breed with an Unusually High Incidence of Diabetes Mellitus.	Genes	2020
33065008	Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens.	Curr Biol	2020
33110926	Physiologic Long Head Biceps Tendon Excursion Throughout Shoulder Range of Motion: A Cadaveric Study.	Orthopaedic Journal of Sports Medicine	2020
33396320	Genomic Variations in Drug Resistant <i>Mycobacterium tuberculosis</i> Strains Collected from Patients with Different Localization of Infection.	Antibiotics (Basel)	2020
33321928	Karyotype Evolution in 10 Pinniped Species: Variability of Heterochromatin versus High Conservatism of Euchromatin as Revealed by Comparative Molecular Cytogenetics.	Genes	2020
30782839	White shark genome reveals ancient elasmobranch adaptations associated with wound healing and the maintenance of genome stability.	Proceedings of the National Academy of Sciences of the United States of America	2019
31628318	Puma genomes from North and South America provide insights into the genomic consequences of inbreeding.	Nature Communications	2019
31671864	Comparative Chromosome Mapping of Musk Ox and the X Chromosome among Some Bovidae Species.	Genes	2019
31754100	Author Correction: Puma genomes from North and South America provide insights into the genomic consequences of inbreeding.	Nature Communications	2019
31289599	Integrated analysis of competing endogenous RNA network revealing potential prognostic biomarkers of hepatocellular carcinoma.	J Cancer	2019
30760546	Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks.	Genome Res	2019
31437278	Precision nomenclature for the new genomics.	Gigascience	2019
31000506	Whole Genome Sequencing and Re-sequencing of the Sable Antelope (): A Resource for Monitoring Diversity in and Populations.	G3: Genes, Genomes, Genetics	2019
30687668	Trifurcate Origin of Long Head of Biceps Brachii: A Case Report and Literature Review.		2018
28951974	New high copy tandem repeat in the content of the chicken W chromosome.	Chromosoma	2018
30104754	Author Correction: Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours.	Nat Ecol Evol	2018
30482605	Genome-Wide Evolutionary Analysis of Natural History and Adaptation in the World's Tigers.	Current Biology	2018
29995946	Analytical "bake-off" of whole genome sequencing quality for the Genome Russia project using a small cohort for autoimmune hepatitis.	PLoS ONE	2018
30082739	Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours.	Nat Ecol Evol	2018
29402215	Adaptive genomic evolution of opsins reveals that early mammals flourished in nocturnal environments.	BMC Genomics	2018
29398992	Long Head of Biceps Tendon Management: a Survey of the American Shoulder and Elbow Surgeons.	HSS Journal	2018
29140441	The Complete Phylogeny of Pangolins: Scaling Up Resources for the Molecular Tracing of the Most Trafficked Mammals on Earth.	Journal of Heredity	2018
29718205	Innovative assembly strategy contributes to understanding the evolution and conservation genetics of the endangered Solenodon paradoxus from the island of Hispaniola.	Gigascience	2018
29692627	Marker of proliferation Ki-67 expression is associated with transforming growth factor beta 1 and can predict the prognosis of patients with hepatic B virus-related hepatocellular carcinoma.	Cancer Management and Research	2018
29460750	Whole-Genome Analysis of Mycobacterium tuberculosis from Patients with Tuberculous Spondylitis, Russia.	Emerging Infectious Diseases	2018