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Author Details

Wenqing Shui
iHuman Institute, ShanghaiTech University
1998
81
27
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36609502Benchmarking commonly used software suites and analysis workflows for DIA proteomics and phosphoproteomics.Nat Commun2023
37252352Conformational Dynamics of the Activated GLP-1 Receptor-G<sub>s</sub> Complex Revealed by Cross-Linking Mass Spectrometry and Integrative Structure Modeling.ACS Cent Sci2023
36095215Nanobodies and chemical cross-links advance the structural and functional analysis of PI3Kα.Proc Natl Acad Sci U S A2022
35432630m<sup>6</sup>A-Related lncRNAs Are Potential Prognostic Biomarkers of Cervical Cancer and Affect Immune Infiltration.Dis Markers2022
35430417Structural optimizations and bioevaluation of N-H aporphine analogues as G<sub>q</sub>-biased and selective serotonin 5-HT<sub>2C</sub> receptor agonists.Bioorg Chem2022
35355784Post-Translational Modifications of G Protein-Coupled Receptors Revealed by Proteomics and Structural Biology.Front Chem2022
35865478Circulating Tumor DNA Characteristics Based on Next Generation Sequencing and Its Correlation With Clinical Parameters in Patients With Lymphoma.Front Oncol2022
33414387G protein-coupled receptors: structure- and function-based drug discovery.Signal Transduct Target Ther2021
34795227DeepPhospho accelerates DIA phosphoproteome profiling through in silico library generation.Nat Commun2021
34290087Multiregional profiling of the brain transmembrane proteome uncovers novel regulators of depression.Sci Adv2021
34201418Discovery of Novel Allosteric Modulators Targeting an Extra-Helical Binding Site of GLP-1R Using Structure- and Ligand-Based Virtual Screening.Biomolecules2021
33975691Corrigendum "Evaluation of chemical cross-linkers for in-depth structural analysis of G protein-coupled receptors through cross-linking mass spectrometry" [Analytica Chimica Acta 1102 (2020) 53-62].Anal Chim Acta2021
34048655Affinity Mass Spectrometry-Based Fragment Screening Identified a New Negative Allosteric Modulator of the Adenosine A<sub>2A</sub> Receptor Targeting the Sodium Ion Pocket.ACS Chem Biol2021
31606719Systematic mapping of protein-metabolite interactions with mass spectrometry-based techniques.Curr Opin Biotechnol2020
31968160Identification of Novel 1-<i>O</i>-Substituted Aporphine Analogues as Potent 5-HT<sub>2C</sub> Receptor Agonists.ACS Chem Neurosci2020
32043996Evaluation of chemical cross-linkers for in-depth structural analysis of G protein-coupled receptors through cross-linking mass spectrometry.Anal Chim Acta2020
33258587Targeted Proteomics Combined with Affinity Mass Spectrometry Analysis Reveals Antagonist E7 Acts As an Intracellular Covalent Ligand of Orphan Receptor GPR52.ACS Chem Biol2020
33177502Organized cannabinoid receptor distribution in neurons revealed by super-resolution fluorescence imaging.Nat Commun2020
32123739A Novel G Protein-Biased and Subtype-Selective Agonist for a G Protein-Coupled Receptor Discovered from Screening Herbal Extracts.ACS Cent Sci2020
32109675Hybrid Spectral Library Combining DIA-MS Data and a Targeted Virtual Library Substantially Deepens the Proteome Coverage.iScience2020
32490198Correction to "A Novel G Protein-Biased and Subtype-Selective Agonist for a G Protein-Coupled Receptor Discovered from Screening Herbal Extracts".ACS Cent Sci2020
32125824Correction to Accelerating the Throughput of Affinity Mass Spectrometry-Based Ligand Screening toward a G Protein-Coupled Receptor.Anal Chem2020
30510194Crystal structure of misoprostol bound to the labor inducer prostaglandin E<sub>2</sub> receptor.Nat Chem Biol2019
31094506Accelerating the Throughput of Affinity Mass Spectrometry-Based Ligand Screening toward a G Protein-Coupled Receptor.Anal Chem2019
30788466Efficient ligand discovery from natural herbs by integrating virtual screening, affinity mass spectrometry and targeted metabolomics.Analyst2019
30573766Publisher Correction: Crystal structure of misoprostol bound to the labor inducer prostaglandin E<sub>2</sub> receptor.Nat Chem Biol2019
30421238Dynamic <sup>13</sup>C Labeling of Fast Turnover Metabolites for Analysis of Metabolic Fluxes and Metabolite Channeling.Methods Mol Biol2019
30421229Exploiting High-Resolution Mass Spectrometry for Targeted Metabolite Quantification and <sup>13</sup>C-Labeling Metabolism Analysis.Methods Mol Biol2019
29589743Correction to Integrating MS1 and MS2 Scans in High-Resolution Parallel Reaction Monitoring Assays for Targeted Metabolite Quantification and Dynamic <sup>13</sup>C-Labeling Metabolism Analysis.Anal Chem2018
30135577Crystal structure of the Frizzled 4 receptor in a ligand-free state.Nature2018
30030164Discrimination and quantification of homologous keratins from goat and sheep with dual protease digestion and PRM assays.J Proteomics2018
29907290Comprehensive evaluation of untargeted metabolomics data processing software in feature detection, quantification and discriminating marker selection.Anal Chim Acta2018
30442403Corrigendum to "Comprehensive evaluation of untargeted metabolomics data processing software in feature detection, quantification and discriminating marker selection" [ACA 1029, (2018) 50-57].Anal Chim Acta2018
29611422Distinct Proteome Remodeling of Industrial Saccharomyces cerevisiae in Response to Prolonged Thermal Stress or Transient Heat Shock.J Proteome Res2018
29577069Identification of natural products as novel ligands for the human 5-HT<sub>2C</sub> receptor.Biophys Rep2018
29732102High-throughput identification of G protein-coupled receptor modulators through affinity mass spectrometry screening.Chem Sci2018
27995803Optimization of Acquisition and Data-Processing Parameters for Improved Proteomic Quantification by Sequential Window Acquisition of All Theoretical Fragment Ion Mass Spectrometry.J Proteome Res2017
28287394Quantitative proteomics reveal proteins enriched in tubular endoplasmic reticulum of <i>Saccharomyces cerevisiae</i>.Elife2017
28011284Phosphorylation of Tudor-SN, a novel substrate of JNK, is involved in the efficient recruitment of Tudor-SN into stress granules.Biochim Biophys Acta Mol Cell Res2017
27966897Integrating MS1 and MS2 Scans in High-Resolution Parallel Reaction Monitoring Assays for Targeted Metabolite Quantification and Dynamic <sup>13</sup>C-Labeling Metabolism Analysis.Anal Chem2017
26810586An NGS-Independent Strategy for Proteome-Wide Identification of Single Amino Acid Polymorphisms by Mass Spectrometry.Anal Chem2016
27768894Crystal Structure of the Human Cannabinoid Receptor CB<sub>1</sub>.Cell2016
27721984ASK1 controls spindle orientation and positioning by phosphorylating EB1 and stabilizing astral microtubules.Cell Discov2016
27403722Novel Chemical Ligands to Ebola Virus and Marburg Virus Nucleoproteins Identified by Combining Affinity Mass Spectrometry and Metabolomics Approaches.Sci Rep2016
26789629Combining Untargeted and Targeted Proteomic Strategies for Discrimination and Quantification of Cashmere Fibers.PLoS One2016
26894684Targeted cofactor quantification in metabolically engineered E. coli using solid phase extraction and hydrophilic interaction liquid chromatography-mass spectrometry.J Chromatogr B Analyt Technol Biomed Life Sci2016
25311840Proteomic identification and functional characterization of MYH9, Hsc70, and DNAJA1 as novel substrates of HDAC6 deacetylase activity.Protein Cell2015
26320641Multiple ligand detection and affinity measurement by ultrafiltration and mass spectrometry analysis applied to fragment mixture screening.Anal Chim Acta2015
26581825New HDAC6-mediated deacetylation sites of tubulin in the mouse brain identified by quantitative mass spectrometry.Sci Rep2015
26445615Identification of novel microtubule-binding proteins by taxol-mediated microtubule stabilization and mass spectrometry analysis.Thorac Cancer2015
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Collaborators

Suwen Zhao
ShanghaiTech University, China iHuman Institute
Co-authored papers 13
Bingjie Zhang
JiangYuan Hospital Affiliated to Jiangsu Institute of Nuclear Medicine
Co-authored papers 10
Raymond C Stevens
iHuman Institute, ShanghaiTech University
Co-authored papers 8
Pengyuan Yang
Co-authored papers 8
Carolyn R Bertozzi
Stanford University
Co-authored papers 5
Guisheng Zhong
ShanghaiTech University
Co-authored papers 5
Jay D Keasling
University of California berkeley
Co-authored papers 4
Xian Chen
Co-authored papers 4
Gye Won Han
Bridge Institute, University of Southern California
Co-authored papers 4
Xiaoguang Lei
Peking-Tsinghua Center for Life Sciences, Peking University
Co-authored papers 3
Petr Popov
Skolkovo Institute of Science and Technology
Co-authored papers 3
Yaoyang Zhang
Co-authored papers 3
Kenneth A Jacobson
National Institutes of Health
Co-authored papers 2
Xi-Ping Huang
University of North Carolina School of Medicine
Co-authored papers 2
Kate L White
Lawrence Berkeley National Laboratory
Co-authored papers 2
Christopher J Petzold
Joint BioEnergy Institute
Co-authored papers 2
Zhan-Guo Gao
National Institutes of Health
Co-authored papers 2
Fan Wu
ShanghaiTech University
Co-authored papers 1
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 1
Zhihua Wang
Co-authored papers 1
Alyssa M Redding
Lawrence Berkeley National Laboratory, Joint BioEnergy Institute
Co-authored papers 1
Zihe Rao
Nankai University
Co-authored papers 1
Liping Sun
iHuman Institute, ShanghaiTech University
Co-authored papers 1
Shijia Yuan
iHuman Institute, ShanghaiTech University
Co-authored papers 1
Raymond C Stevens
iHuman Institute, ShanghaiTech University
Co-authored papers 1
Fangzhi Tan
Zhongda Hospital, Advanced Institute for Life and Health, Southeast University
Co-authored papers 1
Huizhi Fan
Co-authored papers 1
Bryan L Roth
UNC Chapel Hill School of Medicine
Co-authored papers 1
Peter K Vogt
Co-authored papers 1
Chenxi Wang
iHuman Institute, ShanghaiTech University
Co-authored papers 1
Release 1.2