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Author Details

Jeremy C Simpson
UCD Conway Institute of Biomolecular and Biomedical Science
1995
122
40
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36825886A universal stress protein upregulated by hypoxia has a role in Burkholderia cenocepacia intramacrophage survival: Implications for chronic infection in cystic fibrosis.Microbiologyopen2023
37572888Pseudomonas umsongensis GO16 as a platform for the in vivo synthesis of short and medium chain length polyhydroxyalkanoate blends.Bioresour Technol2023
347839792D-GolgiTrack-a semi-automated tracking system to quantify morphological changes and dynamics of the Golgi apparatus and Golgi-derived membrane tubules.Med Biol Eng Comput2022
36523508An imaging-based RNA interference screen for modulators of the Rab6-mediated Golgi-to-ER pathway in mammalian cells.Front Cell Dev Biol2022
36094851Photophysical Properties and DNA Binding of Two Intercalating Osmium Polypyridyl Complexes Showing Light-Switch Effects.Inorg Chem2022
34997141Confocal microscopy analysis reveals that only a small proportion of extracellular vesicles are successfully labelled with commonly utilised staining methods.Sci Rep2022
35080333USP17 is required for peripheral trafficking of lysosomes.EMBO Rep2022
32881632Emerging roles for Rho GTPases operating at the Golgi complex.Small GTPases2021
33504900Inactivation efficacy of atmospheric air plasma and airborne acoustic ultrasound against bacterial biofilms.Sci Rep2021
35037665A Robust Method for the Large-Scale Production of Spheroids for High-Content Screening and Analysis Applications.J Vis Exp2021
34874399Cell3: a new vision for study of the endomembrane system in mammalian cells.Biosci Rep2021
34793591Cell3: A new vision for study of the endomembrane system in mammalian cells.Biosci Rep2021
34496765A novel automated image analysis pipeline for quantifying morphological changes to the endoplasmic reticulum in cultured human cells.BMC Bioinformatics2021
34661590Multiparametric nanoparticle-induced toxicity readouts with single cell resolution in HepG2 multicellular tumour spheroids.Nanoscale2021
33397288A novel high-content screening approach for the elucidation of C. jejuni biofilm composition and integrity.BMC Microbiol2021
32142105SCLpred-EMS: subcellular localization prediction of endomembrane system and secretory pathway proteins by Deep N-to-1 Convolutional Neural Networks.Bioinformatics2020
35019342Investigation of the Cellular Destination of Fluorescently Labeled Carbon Nanohorns in Cultured Cells.ACS Appl Bio Mater2020
32059764Precise Targeting of miRNA Sites Restores CFTR Activity in CF Bronchial Epithelial Cells.Mol Ther2020
33057158Antimicrobial effects of airborne acoustic ultrasound and plasma activated water from cold and thermal plasma systems on biofilms.Sci Rep2020
32185116Characterisation of GLUT4 trafficking in HeLa cells: comparable kinetics and orthologous trafficking mechanisms to 3T3-L1 adipocytes.PeerJ2020
32244909Modification of the Mammalian Endomembrane System in Healthy and Diseased Cells.Int J Mol Sci2020
32354068RNA Interference Screening Identifies Novel Roles for RhoBTB1 and RhoBTB3 in Membrane Trafficking Events in Mammalian Cells.Cells2020
30689642Computational and experimental analysis of bioactive peptide linear motifs in the integrin adhesome.PLoS One2019
31680803NeurodegenERation: The Central Role for ER Contacts in Neuronal Function and Axonopathy, Lessons From Hereditary Spastic Paraplegias and Related Diseases.Front Neurosci2019
31408960Multitasking Rab Proteins in Autophagy and Membrane Trafficking: A Focus on Rab33b.Int J Mol Sci2019
31432619Rab35 controls cilium length, function and membrane composition.EMBO Rep2019
31419585The Challenges and Possibilities of Extracellular Vesicles as Therapeutic Vehicles.Eur J Pharm Biopharm2019
31334922A High-Throughput Automated Confocal Microscopy Platform for Quantitative Phenotyping of Nanoparticle Uptake and Transport in Spheroids.Small2019
30565853Rapid Growth Cone Uptake and Dynein-Mediated Axonal Retrograde Transport of Negatively Charged Nanoparticles in Neurons Is Dependent on Size and Cell Type.Small2019
29071510Heritable Skeletal Disorders Arising from Defects in Processing and Transport of Type I Procollagen from the ER: Perspectives on Possible Therapeutic Approaches.Handb Exp Pharmacol2018
29590755Bioinspired Star-Shaped Poly(l-lysine) Polypeptides: Efficient Polymeric Nanocarriers for the Delivery of DNA to Mesenchymal Stem Cells.Mol Pharm2018
27957805Systematic functional analysis of the Ras GTPase family unveils a conserved network required for anterograde protein trafficking.Proteomics2017
29037990Roles for the VCP co-factors Npl4 and Ufd1 in neuronal function in Drosophila melanogaster.J Genet Genomics2017
29019498Characterization of carboxylate nanoparticle adhesion with the fungal pathogen Candida albicans.Nanoscale2017
27720426Rho GTPases operating at the Golgi complex: Implications for membrane traffic and cancer biology.Tissue Cell2017
27999994Functional characterisation of the YIPF protein family in mammalian cells.Histochem Cell Biol2017
26927507Lysosome triggered near-infrared fluorescence imaging of cellular trafficking processes in real time.Nat Commun2016
27581283Genome-Wide siRNA Screening Using Forward Transfection: Identification of Modulators of Membrane Trafficking in Mammalian Cells.Methods Mol Biol2016
27374232A systematic High-Content Screening microscopy approach reveals key roles for Rab33b, OATL1 and Myo6 in nanoparticle trafficking in HeLa cells.Sci Rep2016
26884809Implementation of the Rank-Weighted Co-localization (RWC) algorithm in multiple image analysis platforms for quantitative analysis of microscopy images.Source Code Biol Med2016
26769557Accurate and semi-automated analysis of bacterial association with mammalian cells.J Microbiol Methods2016
25578701Hydroxyapatite and fluorapatite coatings on dental screws: effects of blast coating process and biological response.J Mater Sci Mater Med2015
26693811High-content analysis of Rab protein function at the ER-Golgi interface.Bioarchitecture2015
25908578High-content analysis for drug delivery and nanoparticle applications.Drug Discov Today2015
25999475A high-content screening microscopy approach to dissect the role of Rab proteins in Golgi-to-ER retrograde trafficking.J Cell Sci2015
25759509A Fluorescent Live Imaging Screening Assay Based on Translocation Criteria Identifies Novel Cytoplasmic Proteins Implicated in G Protein-coupled Receptor Signaling Pathways.Mol Cell Proteomics2015
25504748Biocompatibility of ferroelectric lithium niobate and the influence of polarization charge on osteoblast proliferation and function.J Biomed Mater Res A2015
25504742Trajectory-based co-localization measures for nanoparticle-cell interaction studies.Small2015
24405750CNIH4 interacts with newly synthesized GPCR and controls their export from the endoplasmic reticulum.Traffic2014
25233431The trials and tubule-ations of Rab6 involvement in Golgi-to-ER retrograde transport.Biochem Soc Trans2014
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Collaborators

Rainer Pepperkok
Translational Lung Research Center Heidelberg, German Center for Lung Research
Co-authored papers 33
Stefan Wiemann
Co-authored papers 11
Vasanth R Singan
US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 6
Alexander Mehrle
Co-authored papers 3
Florian Hahne
1 Preclinical Safety, Novartis Institutes for Biomedical Research
Co-authored papers 2
Heiko Rosenfelder
Co-authored papers 2
Wolfgang Huber
Technische Universitat Munchen
Co-authored papers 2
Vibor Laketa
Heidelberg University Hospital
Co-authored papers 2
Jan Ellenberg
Institute of Child Health and Human Development
Co-authored papers 2
Denis C Shields
Conway Institute of Biomolecular and Biomedical Research, University College Dublin
Co-authored papers 2
Ten Feizi
Co-authored papers 1
Michel Bouvier
Institute for Research in Immunology and Cancer, Universite de Montreal
Co-authored papers 1
Winston Hide
Harvard Medical School
Co-authored papers 1
Silke Stertz
Institute of Medical Virology, University of Zurich
Co-authored papers 1
Elton Rexhepaj
UCD Conway Institute, University College Dublin
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Albrecht von Brunn
Max-von-Pettenkofer Institute, Ludwig-Maximilians-University (LMU) Munich
Co-authored papers 1
Beate Neumann
Center for Molecular Materials, Universitat Bielefeld, Universitatsstrasse 25
Co-authored papers 1
Jens S Andersen
University of Southern Denmark
Co-authored papers 1
Oliver Hofmann
University of Melbourne
Co-authored papers 1
Ralf Zimmer
Ludwig-Maximilians-Universitat Munchen
Co-authored papers 1
William L Brown
University of Minnesota
Co-authored papers 1
Caroline C Friedel
Institute of Informatics, Ludwig-Maximilians-Universitat Munchen
Co-authored papers 1
Chun-Nan Hsu
University of California, C.N.H.) and Veterans Affairs San Diego Healthcare System
Co-authored papers 1
Fran??ois-Michel Boisvert
Centre de Recherche du Centre Hospitalier Universitaire de Sherbrooke (CRCHUS)
Co-authored papers 1
William M Gallagher
All-Island Cancer Research Institute, UCD Conway Institute, University College Dublin
Co-authored papers 1
Peer Bork
University of Wurzburg
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Georg Kochs
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Release 1.2