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| 36824803 | An open protocol for modeling T Cell Clonotype repertoires using TCRβ CDR3 sequences. | Res Sq | 2023 |
| 36889927 | Defining clonal hematopoiesis of indeterminate potential: evolutionary dynamics and detection under aging and inflammation. | Cold Spring Harb Mol Case Stud | 2023 |
| 36993424 | Supervised learning of high-confidence phenotypic subpopulations from single-cell data. | bioRxiv | 2023 |
| 37506692 | Population screening shows risk of inherited cancer and familial hypercholesterolemia in Oregon. | Am J Hum Genet | 2023 |
| 37506692 | Population screening shows risk of inherited cancer and familial hypercholesterolemia in Oregon. | Am J Hum Genet | 2023 |
| 36993424 | Supervised learning of high-confidence phenotypic subpopulations from single-cell data. | bioRxiv | 2023 |
| 36889927 | Defining clonal hematopoiesis of indeterminate potential: evolutionary dynamics and detection under aging and inflammation. | Cold Spring Harb Mol Case Stud | 2023 |
| 35243422 | An omic and multidimensional spatial atlas from serial biopsies of an evolving metastatic breast cancer. | Cell Rep Med | 2022 |
| 35468987 | Plasma cell-free RNA profiling distinguishes cancers from pre-malignant conditions in solid and hematologic malignancies. | NPJ Precis Oncol | 2022 |
| 35243422 | An omic and multidimensional spatial atlas from serial biopsies of an evolving metastatic breast cancer. | Cell Rep Med | 2022 |
| 35468987 | Plasma cell-free RNA profiling distinguishes cancers from pre-malignant conditions in solid and hematologic malignancies. | NPJ Precis Oncol | 2022 |
| 33466369 | The Feasibility of Patient-Specific Circulating Tumor DNA Monitoring throughout Multi-Modality Therapy for Locally Advanced Esophageal and Rectal Cancer: A Potential Biomarker for Early Detection of Subclinical Disease. | Diagnostics (Basel) | 2021 |
| 33466369 | The Feasibility of Patient-Specific Circulating Tumor DNA Monitoring throughout Multi-Modality Therapy for Locally Advanced Esophageal and Rectal Cancer: A Potential Biomarker for Early Detection of Subclinical Disease. | Diagnostics (Basel) | 2021 |
| 33886505 | The impact of tumor epithelial and microenvironmental heterogeneity on treatment responses in HER2+ breast cancer. | JCI Insight | 2021 |
| 33510149 | Proliferative polyploid cells give rise to tumors via ploidy reduction. | Nat Commun | 2021 |
| 34677363 | Plasma Lipidomic Patterns in Patients with Symptomatic Coronary Microvascular Dysfunction. | Metabolites | 2021 |
| 34381935 | Polygenic Breast Cancer Risk for Women Veterans in the Million Veteran Program. | JCO Precis Oncol | 2021 |
| 33510149 | Proliferative polyploid cells give rise to tumors via ploidy reduction. | Nat Commun | 2021 |
| 33886505 | The impact of tumor epithelial and microenvironmental heterogeneity on treatment responses in HER2+ breast cancer. | JCI Insight | 2021 |
| 34381935 | Polygenic Breast Cancer Risk for Women Veterans in the Million Veteran Program. | JCO Precis Oncol | 2021 |
| 34677363 | Plasma Lipidomic Patterns in Patients with Symptomatic Coronary Microvascular Dysfunction. | Metabolites | 2021 |
| 32565715 | Deep Functional and Molecular Characterization of a High-Risk Undifferentiated Pleomorphic Sarcoma. | Sarcoma | 2020 |
| 32144193 | Reciprocal monoallelic expression of ASAR lncRNA genes controls replication timing of human chromosome 6. | RNA | 2020 |
| 31911616 | Multiregion exome sequencing of ovarian immature teratomas reveals 2N near-diploid genomes, paucity of somatic mutations, and extensive allelic imbalances shared across mature, immature, and disseminated components. | Mod Pathol | 2020 |
| 33199705 | Transient commensal clonal interactions can drive tumor metastasis. | Nat Commun | 2020 |
| 33020547 | Diurnal stability of cell-free DNA and cell-free RNA in human plasma samples. | Sci Rep | 2020 |
| 32565715 | Deep Functional and Molecular Characterization of a High-Risk Undifferentiated Pleomorphic Sarcoma. | Sarcoma | 2020 |
| 31911616 | Multiregion exome sequencing of ovarian immature teratomas reveals 2N near-diploid genomes, paucity of somatic mutations, and extensive allelic imbalances shared across mature, immature, and disseminated components. | Mod Pathol | 2020 |
| 33199705 | Transient commensal clonal interactions can drive tumor metastasis. | Nat Commun | 2020 |
| 33020547 | Diurnal stability of cell-free DNA and cell-free RNA in human plasma samples. | Sci Rep | 2020 |
| 32144193 | Reciprocal monoallelic expression of ASAR lncRNA genes controls replication timing of human chromosome 6. | RNA | 2020 |
| 30930117 | Human Tumor-Associated Macrophage and Monocyte Transcriptional Landscapes Reveal Cancer-Specific Reprogramming, Biomarkers, and Therapeutic Targets. | Cancer Cell | 2019 |
| 30811916 | Alternative Splicing in Tumors - A Path to Immunogenicity? | N Engl J Med | 2019 |
| 30833418 | Circulating tumor DNA dynamics using patient-customized assays are associated with outcome in neoadjuvantly treated breast cancer. | Cold Spring Harb Mol Case Stud | 2019 |
| 30930117 | Human Tumor-Associated Macrophage and Monocyte Transcriptional Landscapes Reveal Cancer-Specific Reprogramming, Biomarkers, and Therapeutic Targets. | Cancer Cell | 2019 |
| 30811916 | Alternative Splicing in Tumors - A Path to Immunogenicity? | N Engl J Med | 2019 |
| 30833418 | Circulating tumor DNA dynamics using patient-customized assays are associated with outcome in neoadjuvantly treated breast cancer. | Cold Spring Harb Mol Case Stud | 2019 |
| 29331515 | MHC class I loaded ligands from breast cancer cell lines: A potential HLA-I-typed antigen collection. | J Proteomics | 2018 |
| 30232459 | Differentiation-state plasticity is a targetable resistance mechanism in basal-like breast cancer. | Nat Commun | 2018 |
| 29661779 | Report from the SWOG Radiation Oncology Committee: Research Objectives Workshop 2017. | Clin Cancer Res | 2018 |
| 29438696 | The Integrated Genomic Landscape of Thymic Epithelial Tumors. | Cancer Cell | 2018 |
| 29749794 | Molecular Cytogenetics Guides Massively Parallel Sequencing of a Radiation-Induced Chromosome Translocation in Human Cells. | Radiat Res | 2018 |
| 29550076 | Long-Term Correction of Diabetes in Mice by In Vivo Reprogramming of Pancreatic Ducts. | Mol Ther | 2018 |
| 29331515 | MHC class I loaded ligands from breast cancer cell lines: A potential HLA-I-typed antigen collection. | J Proteomics | 2018 |
| 30232459 | Differentiation-state plasticity is a targetable resistance mechanism in basal-like breast cancer. | Nat Commun | 2018 |
| 29550076 | Long-Term Correction of Diabetes in Mice by In Vivo Reprogramming of Pancreatic Ducts. | Mol Ther | 2018 |
| 29749794 | Molecular Cytogenetics Guides Massively Parallel Sequencing of a Radiation-Induced Chromosome Translocation in Human Cells. | Radiat Res | 2018 |
| 29438696 | The Integrated Genomic Landscape of Thymic Epithelial Tumors. | Cancer Cell | 2018 |
| 29661779 | Report from the SWOG Radiation Oncology Committee: Research Objectives Workshop 2017. | Clin Cancer Res | 2018 |