Skip to Main Content

Author Details

Amrita Pati
Department of Energy (DOE) Joint Genome Institute
2006
293
35
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36689692Tarlatamab, a First-in-Class DLL3-Targeted Bispecific T-Cell Engager, in Recurrent Small-Cell Lung Cancer: An Open-Label, Phase I Study.J Clin Oncol2023
35495676The Genome of the Acid Soil-Adapted Strain <i>Rhizobium favelukesii</i> OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host.Front Microbiol2022
34808872Maximum power transfer in a real metal slit: an analytic approach.Opt Express2021
31509456Correlation of ROS1 Immunohistochemistry With <i>ROS1</i> Fusion Status Determined by Fluorescence In Situ Hybridization.Arch Pathol Lab Med2020
29546662An integrated workflow for phenazine-modifying enzyme characterization.J Ind Microbiol Biotechnol2018
286046601,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.Nat Biotechnol2017
28975015High-quality draft genome sequence of <i>Ensifer meliloti</i> Mlalz-1, a microsymbiont of <i>Medicago laciniata</i> (L.) miller collected in Lanzarote, Canary Islands, Spain.Stand Genomic Sci2017
26057843ProDeGe: a computational protocol for fully automated decontamination of genomes.ISME J2016
26487573Metagenomic investigation of the geologically unique Hellenic Volcanic Arc reveals a distinctive ecosystem with unexpected physiology.Environ Microbiol2016
27617056An improved high-quality draft genome sequence of Carnobacterium inhibens subsp. inhibens strain K1(T).Stand Genomic Sci2016
27609918Genome Sequence of Marinobacter sp. Strain MCTG268 Isolated from the Cosmopolitan Marine Diatom Skeletonema costatum.Genome Announc2016
27594974High quality draft genome sequences of Pseudomonas fulva DSM 17717(T), Pseudomonas parafulva DSM 17004(T) and Pseudomonas cremoricolorata DSM 17059(T) type strains.Stand Genomic Sci2016
27491994Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton.Genome Announc2016
27313837High-quality draft genome sequence of Flavobacterium suncheonense GH29-5(T) (DSM 17707(T)) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5(T).Stand Genomic Sci2016
27340511High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India.Stand Genomic Sci2016
27274783Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050(T) (DSM 19838(T)) and Gramella portivictoriae UST040801-001(T) (DSM 23547(T)), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et al. 2014 and Gramella portivictoriae Lau et al. 2005.Stand Genomic Sci2016
26744812Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations.ISME J2016
27004084Erratum to: The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4).Stand Genomic Sci2016
26814032Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs.Nat Commun2016
26918089The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4).Stand Genomic Sci2016
25744998Complete Genome Sequence of the Opitutaceae Bacterium Strain TAV5, a Potential Facultative Methylotroph of the Wood-Feeding Termite Reticulitermes flavipes.Genome Announc2015
26439299Ten years of maintaining and expanding a microbial genome and metagenome analysis system.Trends Microbiol2015
26388968High-quality permanent draft genome sequence of the Lebeckia - nodulating Burkholderia dilworthii strain WSM3556(T).Stand Genomic Sci2015
26251504Draft Genome Sequence of Frankia sp. Strain DC12, an Atypical, Noninfective, Ineffective Isolate from Datisca cannabina.Genome Announc2015
26629308Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of Ornithopus compressus from the Greek Island of Sifnos.Stand Genomic Sci2015
26512312High-quality permanent draft genome sequence of Bradyrhizobium sp. strain WSM1743 - an effective microsymbiont of an Indigofera sp. growing in Australia.Stand Genomic Sci2015
26512310Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2(T).Stand Genomic Sci2015
26512311The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4).Stand Genomic Sci2015
26512309Partial genome sequence of Thioalkalivibrio thiocyanodenitrificans ARhD 1(T), a chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium capable of complete denitrification.Stand Genomic Sci2015
26594306Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1(T), an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake.Stand Genomic Sci2015
26566423High-quality draft genome sequence of Gracilimonas tropica CL-CB462(T) (DSM 19535(T)), isolated from a Synechococcus culture.Stand Genomic Sci2015
26380641High-Quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym.Stand Genomic Sci2015
26380640High-quality permanent draft genome sequence of the extremely osmotolerant diphenol degrading bacterium Halotalea alkalilenta AW-7(T), and emended description of the genus Halotalea.Stand Genomic Sci2015
26380638High quality draft genome sequence of Corynebacterium ulceribovis type strain IMMIB-L1395(T) (DSM 45146(T)).Stand Genomic Sci2015
26380636High quality draft genome sequence of Bacteroides barnesiae type strain BL2(T) (DSM 18169(T)) from chicken caecum.Stand Genomic Sci2015
26380634High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2(T) (DSM 21788(T)), a valuable source of polysaccharide decomposing enzymes.Stand Genomic Sci2015
26380633Toward a standard in structural genome annotation for prokaryotes.Stand Genomic Sci2015
26380632High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy.Stand Genomic Sci2015
26380038High-quality permanent draft genome sequence of Ensifer meliloti strain 4H41, an effective salt- and drought-tolerant microsymbiont of Phaseolus vulgaris.Stand Genomic Sci2015
26380037High-quality permanent draft genome sequence of Bradyrhizobium sp. Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica.Stand Genomic Sci2015
26478786High-quality permanent draft genome sequence of the Mimosa asperata - nodulating Cupriavidus sp. strain AMP6.Stand Genomic Sci2015
26478785High-quality permanent draft genome sequence of the Lebeckia ambigua-nodulating Burkholderia sp. strain WSM4176.Stand Genomic Sci2015
26284661Minimum Information about a Biosynthetic Gene cluster.Nat Chem Biol2015
26664655High-quality permanent draft genome sequence of Ensifer medicae strain WSM244, a microsymbiont isolated from Medicago polymorpha growing in alkaline soil.Stand Genomic Sci2015
26184945Genome Sequence of Halomonas sp. Strain MCTG39a, a Hydrocarbon-Degrading and Exopolymeric Substance-Producing Bacterium.Genome Announc2015
26205857Draft Genome Sequence of the Cellulolytic and Xylanolytic Thermophile Clostridium clariflavum Strain 4-2a.Genome Announc2015
26203342High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Burkholderia sp. strain UYPR1.413.Stand Genomic Sci2015
26203340High quality draft genome sequence of Brachymonas chironomi AIMA4(T) (DSM 19884(T)) isolated from a Chironomus sp. egg mass.Stand Genomic Sci2015
26203338High-quality permanent draft genome sequence of Bradyrhizobium sp. Tv2a.2, a microsymbiont of Tachigali versicolor discovered in Barro Colorado Island of Panama.Stand Genomic Sci2015
26203336High-quality permanent draft genome sequence of Bradyrhizobium sp. Th.b2, a microsymbiont of Amphicarpaea bracteata collected in Johnson City, New York.Stand Genomic Sci2015
  • 1 - 50 of 293

Recommended Authors

Los Alamos National Laboratory
Career Start Year 2012
Number of shared co-authors 8
Los Alamos National Laboratory
Career Start Year 2009
Number of shared co-authors 13
Lundbeck Foundation GeoGenetics Centre, GLOBE Institute, University of Copenhagen
Career Start Year 2006
Number of shared co-authors 12
Oak Ridge National Laboratory
Career Start Year 2005
Number of shared co-authors 11
College of Life Sciences
Career Start Year 2004
Number of shared co-authors 0
Center for Implant Dentistry, University of Florida
Career Start Year 2004
Number of shared co-authors 1
Broad Institute of MIT and Harvard
Career Start Year 2004
Number of shared co-authors 8
Institut Francois Jacob, CNRS, Universite d'Evry, Universite Paris-Saclay
Career Start Year 2003
Number of shared co-authors 2
University of Chicago
Career Start Year 2003
Number of shared co-authors 5
Lawrence Berkeley National Laboratory
Career Start Year 2002
Number of shared co-authors 4
University of Maryland
Career Start Year 2002
Number of shared co-authors 1
Lawrence Berkeley National Laboratory
Career Start Year 2001
Number of shared co-authors 13
Hope College
Career Start Year 2001
Number of shared co-authors 5
National Institute of Genetics
Career Start Year 2001
Number of shared co-authors 0
University of Exeter
Career Start Year 2000
Number of shared co-authors 0
Center for Biotechnology (CeBiTec), Bielefeld University, Universitatsstrasse 27
Career Start Year 2000
Number of shared co-authors 9
Chemistry Institute, Universidade de Sao Paulo - USP
Career Start Year 2000
Number of shared co-authors 10
Lawrence Berkeley National Laboratory
Career Start Year 2000
Number of shared co-authors 5
Institute of Biology, University of Neuchatel
Career Start Year 1998
Number of shared co-authors 15
University of Central Florida
Career Start Year 1998
Number of shared co-authors 17
Northwestern University Biomedical Informatics Center and Center for Genetic Medicine
Career Start Year 1997
Number of shared co-authors 14
The National Laboratory for Scientific Computing (LNCC)
Career Start Year 1997
Number of shared co-authors 1
Institute for Artificial Intelligence, University of Duisburg-Essen
Career Start Year 1996
Number of shared co-authors 22
Simon Fraser University
Career Start Year 1995
Number of shared co-authors 12
J. Craig Venter Institute
Career Start Year 1993
Number of shared co-authors 29
Macquarie University
Career Start Year 1992
Number of shared co-authors 25
Center for Genomic Science Innovation, University of Wisconsin-Madison
Career Start Year 1992
Number of shared co-authors 2
University of Idaho
Career Start Year 1992
Number of shared co-authors 2
National Center for Biotechnology Information, National Institutes of Health
Career Start Year 1985
Number of shared co-authors 20
University of Illinois
Career Start Year 1980
Number of shared co-authors 12

Collaborators

Co-authored papers 271
Celgene Corporation
Co-authored papers 208
Co-authored papers 207
Co-authored papers 178
Center for Algorithmic Biotechnology, Saint Petersburg State University
Co-authored papers 170
Los Alamos National Laboratory
Co-authored papers 160
Co-authored papers 160
Oak Ridge National Laboratory
Co-authored papers 152
McLean Hospital
Co-authored papers 147
DOE Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 101
Los Alamos National Laboratory
Co-authored papers 62
University of Chicago
Co-authored papers 56
Cleveland Clinic Akron General Medical Center
Co-authored papers 51
DOE Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 38
Los Alamos National Laboratory
Co-authored papers 20
Co-authored papers 14
Lawrence Livermore National Laboratory
Co-authored papers 11
Co-authored papers 11
Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 5
DOE Joint Genome Institute
Co-authored papers 5
Lawrence Berkeley National Laboratory
Co-authored papers 4
Los Alamos National Laboratory
Co-authored papers 4
Stanford University
Co-authored papers 3
Co-authored papers 3
Scripps Institution of Oceanography, University of California San Diego
Co-authored papers 2
Lerner Research Institute of the Cleveland Clinic
Co-authored papers 2
Co-authored papers 2
Harvard Medical School, Blavatnik Institute
Co-authored papers 2
Manchester Institute of Biotechnology, University of Manchester
Co-authored papers 2
DOE Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 2