Author details

Full Name

Tanggis Bohnuud

Affiliation

Amgen Inc.

ORCID

Career Start Year

2012

Papers

H Index

Expertise

CM4AI Collaborator

Andrej Sali (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36624149	Improved cytosine base editors generated from TadA variants.	Nat Biotechnol	2023
36624149	Improved cytosine base editors generated from TadA variants.	Nat Biotechnol	2023
34349202	A proteomic platform to identify off-target proteins associated with therapeutic modalities that induce protein degradation or gene silencing.	Sci Rep	2021
34349202	A proteomic platform to identify off-target proteins associated with therapeutic modalities that induce protein degradation or gene silencing.	Sci Rep	2021
31504835	Quantifying the nativeness of antibody sequences using long short-term memory networks.	Protein Eng Des Sel	2019
31504835	Quantifying the nativeness of antibody sequences using long short-term memory networks.	Protein Eng Des Sel	2019
27172383	A benchmark testing ground for integrating homology modeling and protein docking.	Proteins	2017
28430871	ClusPro PeptiDock: efficient global docking of peptide recognition motifs using FFT.	Bioinformatics	2017
27172383	A benchmark testing ground for integrating homology modeling and protein docking.	Proteins	2017
27936493	New additions to the ClusPro server motivated by CAPRI.	Proteins	2017
28236230	Detection of Peptide-Binding Sites on Protein Surfaces Using the Peptimap Server.	Methods Mol Biol	2017
28430871	ClusPro PeptiDock: efficient global docking of peptide recognition motifs using FFT.	Bioinformatics	2017
28236230	Detection of Peptide-Binding Sites on Protein Surfaces Using the Peptimap Server.	Methods Mol Biol	2017
27936493	New additions to the ClusPro server motivated by CAPRI.	Proteins	2017
26837000	Focused grid-based resampling for protein docking and mapping.	J Comput Chem	2016
26837000	Focused grid-based resampling for protein docking and mapping.	J Comput Chem	2016
27122118	Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment.	Proteins	2016
27122118	Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment.	Proteins	2016
25855957	The FTMap family of web servers for determining and characterizing ligand-binding hot spots of proteins.	Nat Protoc	2015
25855957	The FTMap family of web servers for determining and characterizing ligand-binding hot spots of proteins.	Nat Protoc	2015
25275445	Evidence of conformational selection driving the formation of ligand binding sites in protein-protein interfaces.	PLoS Comput Biol	2014
25275445	Evidence of conformational selection driving the formation of ligand binding sites in protein-protein interfaces.	PLoS Comput Biol	2014
23996272	How good is automated protein docking?	Proteins	2013
24123488	Detection of peptide-binding sites on protein surfaces: the first step toward the modeling and targeting of peptide-mediated interactions.	Proteins	2013
23996272	How good is automated protein docking?	Proteins	2013
24123488	Detection of peptide-binding sites on protein surfaces: the first step toward the modeling and targeting of peptide-mediated interactions.	Proteins	2013
22589414	FTMAP: extended protein mapping with user-selected probe molecules.	Nucleic Acids Res	2012
22705795	Computational mapping reveals dramatic effect of Hoogsteen breathing on duplex DNA reactivity with formaldehyde.	Nucleic Acids Res	2012
23053206	Application of asymmetric statistical potentials to antibody-protein docking.	Bioinformatics	2012
23053206	Application of asymmetric statistical potentials to antibody-protein docking.	Bioinformatics	2012
22589414	FTMAP: extended protein mapping with user-selected probe molecules.	Nucleic Acids Res	2012
22705795	Computational mapping reveals dramatic effect of Hoogsteen breathing on duplex DNA reactivity with formaldehyde.	Nucleic Acids Res	2012

1 - 32 of 32

Arthur O Zalevsky

University of California san francisco

Career Start Year 2015

Number of shared co-authors 2

Rosalba Lepore

Basel University Hospital and University of Basel

Career Start Year 2011

Number of shared co-authors 4

Raquel Dias

University of Florida

Career Start Year 2008

Number of shared co-authors 0

Barak Raveh

The Hebrew University of Jerusalem

Career Start Year 2007

Number of shared co-authors 6

Guillaume Launay

CNRS UMR 5086 and Universite Claude Bernard Lyon 1

Career Start Year 2007

Number of shared co-authors 3

Jacob D Durrant

University of Pittsburgh

Career Start Year 2006

Number of shared co-authors 0

Jaume Bonet

Institute of Bioengineering, Ecole Polytechnique Federale de Lausanne

Career Start Year 2006

Number of shared co-authors 7

Yang Zhang

University of Michigan ann arbor

Career Start Year 2002

Number of shared co-authors 12

Hao Fan

College of Biotechnology and Bioengineering, Zhejiang University of Technology

Career Start Year 2001

Number of shared co-authors 2

Matthew P Jacobson

Department of Pharmaceutical Chemistry, University of California san francisco

Career Start Year 1999

Number of shared co-authors 6

Heather A Carlson

University of Michigan ann arbor

Career Start Year 1999

Number of shared co-authors 0

Daron M Standley

Osaka university

Career Start Year 1998

Number of shared co-authors 40

Roberto Sanchez

Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai

Career Start Year 1996

Number of shared co-authors 3

Mallur S Madhusudhan

Indian Institute of Science Education and Research Pune

Career Start Year 1996

Number of shared co-authors 2

Haim J Wolfson

Tel Aviv University

Career Start Year 1991

Number of shared co-authors 36

Baldo Oliva

Universitat Pompeu Fabra

Career Start Year 1991

Number of shared co-authors 4

Ram Samudrala

Jacobs School of Medicine and Biomedical Sciences, University at Buffalo

Career Start Year 1990

Number of shared co-authors 1

Carlos J Camacho

University of Pittsburgh

Career Start Year 1990

Number of shared co-authors 22

Roland L Dunbrack

Fox Chase Cancer Center

Career Start Year 1989

Number of shared co-authors 23

Gerhard Klebe

Institut fur Pharmazeutische Chemie, Philipps-Universitat Marburg

Career Start Year 1988

Number of shared co-authors 2

David Baker

University of Washington

Career Start Year 1988

Number of shared co-authors 43

Herman W T van Vlijmen

Leiden Academic Centre for Drug Research (LACDR), Leiden University

Career Start Year 1988

Number of shared co-authors 1

Christopher W V Hogue

National University of Singapore

Career Start Year 1987

Number of shared co-authors 0

Michael K Gilson

University of California

Career Start Year 1985

Number of shared co-authors 1

Mark S Johnson

Abo Akademi University

Career Start Year 1985

Number of shared co-authors 1

Ruben Abagyan

Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California

Career Start Year 1981

Number of shared co-authors 3

Haruki Nakamura

Institute for Protein Research, Osaka University

Career Start Year 1980

Number of shared co-authors 40

Ruth Nussinov

Sackler School of Medicine, Tel Aviv University

Career Start Year 1980

Number of shared co-authors 10

Andras Fiser

Albert Einstein College of Medicine

Career Start Year 1968

Number of shared co-authors 5

Jens Meiler

Vanderbilt University

Career Start Year 1954

Number of shared co-authors 7

row(s) 1 - 30 of 30

Dima Kozakov

Stony Brook University

Co-authored papers 13

Sandor Vajda

Boston University

Co-authored papers 10

Dmitri Beglov

Boston University

Co-authored papers 9

David R Hall

Diamond Light Source Ltd, Harwell Science & Innovation Campus

Co-authored papers 7

Ora Schueler-Furman

Co-authored papers 5

Bing Xia

Xijing Hospital, The Fourth Military Medical University

Co-authored papers 5

Scott E Mottarella

Boston University

Co-authored papers 5

Zhiping Weng

University of Massachusetts Medical School

Co-authored papers 2

Alexandre M J J Bonvin

Bijvoet Center for Biomolecular Research, Utrecht University

Co-authored papers 2

Lingqi Luo

Co-authored papers 2

Artem B Mamonov

MGH/Harvard Medical School

Co-authored papers 2

Shoshana J Wodak

VIB-VUB Center for Structural Biology

Co-authored papers 2

Edrisse Chermak

King Abdullah University of Science and Technology (KAUST)

Co-authored papers 1

Ivan Anishchenko

University of Washington

Co-authored papers 1

Petras J Kundrotas

The University of Kansas

Co-authored papers 1

Eiichiro Ichiishi

International University of Health and Welfare (IUHV Hospital)

Co-authored papers 1

Anisah W Ghoorah

University of Mauritius

Co-authored papers 1

Neil J Bruce

Heidelberg Institute for Theoretical Studies (HITS)

Co-authored papers 1

Zhiwei Ma

Dalton Cardiovascular Research Center, University of Missouri

Co-authored papers 1

Liming Qiu

Perelman School of Medicine, University of Pennsylvania

Co-authored papers 1

Brian Jim??nez-Garc??a

Utrecht University

Co-authored papers 1

Iain H Moal

GSK Medicines Research Centre

Co-authored papers 1

Rebecca C Wade

Center for Molecular Biology (ZMBH), Heidelberg University

Co-authored papers 1

Jooyoung Lee

Korea Institute for Advanced Study

Co-authored papers 1

Bernard Maigret

Universite de Lorraine, CNRS

Co-authored papers 1

Gydo C P van Zundert

Utrecht University

Co-authored papers 1

Li C Xue

Utrecht University

Co-authored papers 1

Xiaoqin Zou

Dalton Cardiovascular Research Center, University of Missouri

Co-authored papers 1

Ilya A Vakser

The University of Kansas

Co-authored papers 1

Lenna X Peterson

Purdue University

Co-authored papers 1

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