Author details

Full Name

Natali Gulbahce

Affiliation

Complete Genomics Inc.

ORCID

Career Start Year

2004

Papers

H Index

Expertise

CM4AI Collaborator

Andrej Sali (CM4AI)

PMID	Paper Title	Journal Title	Published Year
34825479	High levels of donor-derived cell-free DNA in a case of graft-versus-host-disease following liver transplantation.	Am J Transplant	2022
29545257	Advanced Whole-Genome Sequencing and Analysis of Fetal Genomes from Amniotic Fluid.	Clin Chem	2018
28811315	Quantitative Whole Genome Sequencing of Circulating Tumor Cells Enables Personalized Combination Therapy of Metastatic Cancer.	Cancer Res	2017
26865974	Whole genome sequence analysis of BT-474 using complete Genomics' standard and long fragment read technologies.	Gigascience	2016
27271295	Extensive sequencing of seven human genomes to characterize benchmark reference materials.	Sci Data	2016
25586491	A disease module in the interactome explains disease heterogeneity, drug response and captures novel pathways and genes in asthma.	Hum Mol Genet	2015
26118995	Global Mapping of the Inc-Human Interactome Reveals that Retromer Restricts Chlamydia Infection.	Cell Host Microbe	2015
25672852	Detection and phasing of single base de novo mutations in biopsies from human in vitro fertilized embryos by advanced whole-genome sequencing.	Genome Res	2015
25754993	Scoring Large-Scale Affinity Purification Mass Spectrometry Datasets with MiST.	Curr Protoc Bioinformatics	2015
23882023	Network-based analysis of genome wide association data provides novel candidate genes for lipid and lipoprotein traits.	Mol Cell Proteomics	2013
22371328	MicroRNA-21 integrates pathogenic signaling to control pulmonary hypertension: results of a network bioinformatics approach.	Circulation	2012
22761553	Viral perturbations of host networks reflect disease etiology.	PLoS Comput Biol	2012
22810586	Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins.	Nature	2012
22540628	Emergent criticality through adaptive information processing in boolean networks.	Phys Rev Lett	2012
20708689	Purification and characterization of HIV-human protein complexes.	Methods	2011
22190034	Global landscape of HIV-human protein complexes.	Nature	2011
21764832	Network-based methods for human disease gene prediction.	Brief Funct Genomics	2011
21078624	Comparison of an expanded ataxia interactome with patient medical records reveals a relationship between macular degeneration and ataxia.	Hum Mol Genet	2011
21164525	Network medicine: a network-based approach to human disease.	Nat Rev Genet	2011
20463949	Mapping the evolution of scientific fields.	PLoS One	2010
18277384	Predicting synthetic rescues in metabolic networks.	Mol Syst Biol	2008
18800363	The art of community detection.	Bioessays	2008
19057639	Spontaneous reaction silencing in metabolic optimization.	PLoS Comput Biol	2008
18517837	Local structure of directed networks.	Phys Rev Lett	2008
17500675	Structure of fluctuations near mean-field critical points and spinodals and its implication for physical processes.	Phys Rev E Stat Nonlin Soft Matter Phys	2007
18233497	Damage spreading and criticality in finite random dynamical networks.	Phys Rev Lett	2007
17614692	Optimization in gradient networks.	Chaos	2007
16605477	Statistical mechanics of histories: a cluster Monte Carlo algorithm.	Phys Rev E Stat Nonlin Soft Matter Phys	2006
15089373	Zeros of the partition function and pseudospinodals in long-range Ising models.	Phys Rev E Stat Nonlin Soft Matter Phys	2004

1 - 29 of 29

Vera Pancaldi

Universite de Toulouse, Inserm, CNRS, Universite Toulouse III-Paul Sabatier

Career Start Year 2009

Number of shared co-authors 0

Carlo Vittorio Cannistraci

Center for Complex Network Intelligence (CCNI), Tsinghua University

Career Start Year 2008

Number of shared co-authors 1

Anna Ritz

Reed College

Career Start Year 2007

Number of shared co-authors 1

Aleksandar Stojmirovic

Janssen Research & Development LLC

Career Start Year 2007

Number of shared co-authors 2

Edoardo M Airoldi

Temple University

Career Start Year 2007

Number of shared co-authors 1

Indika Rajapakse

University of Michigan ann arbor

Career Start Year 2006

Number of shared co-authors 0

Tommaso Mazza

Fondazione IRCCS Casa Sollievo della Sofferenza,71013

Career Start Year 2005

Number of shared co-authors 0

Tanusya M Murali

Yong Loo Lin School of Medicine, National University of Singapore

Career Start Year 2003

Number of shared co-authors 0

Andrei Zinovyev

INSERM U, Institut Curie, PSL Research University

Career Start Year 2003

Number of shared co-authors 1

Ilya Shmulevich

Institute for Systems Biology

Career Start Year 2001

Number of shared co-authors 0

Roded Sharan

Tel Aviv University

Career Start Year 2000

Number of shared co-authors 1

Frank Emmert-Streib

Tampere University

Career Start Year 2000

Number of shared co-authors 1

Gary D Bader

University of Toronto

Career Start Year 2000

Number of shared co-authors 6

Stefan Wuchty

University of Miami

Career Start Year 1999

Number of shared co-authors 1

Joel Pradines

Momenta Pharmaceuticals Inc

Career Start Year 1999

Number of shared co-authors 0

Trey Ideker (CM4AI)

University of California San Diego

Career Start Year 1996

Number of shared co-authors 25

Ron Shamir

Tel Aviv University

Career Start Year 1995

Number of shared co-authors 3

Pietro Li??

University of Cambridge

Career Start Year 1994

Number of shared co-authors 0

Bonnie Berger

Massachusetts Institute of Technology

Career Start Year 1994

Number of shared co-authors 5

Edward M Marcotte

University of Texas

Career Start Year 1993

Number of shared co-authors 1

Jesper Tegn??r

King Abdullah University of Science and Technology (KAUST)

Career Start Year 1993

Number of shared co-authors 5

Joel S Bader

Johns Hopkins University

Career Start Year 1993

Number of shared co-authors 10

Mark Gerstein

Yale University

Career Start Year 1991

Number of shared co-authors 14

Zolt??n N Oltvai

University of Rochester

Career Start Year 1991

Number of shared co-authors 2

Vesteinn Thorsson

Institute for Systems Biology

Career Start Year 1990

Number of shared co-authors 0

Gustavo Stolovitzky

IBM T.J. Watson Research Center

Career Start Year 1990

Number of shared co-authors 3

Shankar Subramaniam

University of California

Career Start Year 1989

Number of shared co-authors 1

Yuval Kluger

Yale University School of Medicine

Career Start Year 1984

Number of shared co-authors 2

Richard Bonneau

Center for Computational Biology (CCB), Flatiron Institute, Simons Foundation

Career Start Year 1983

Number of shared co-authors 3

Eytan Ruppin

National Cancer Institute

Career Start Year 1971

Number of shared co-authors 3

row(s) 1 - 30 of 30

Albert-L??szl?? Barab??si

Network Science Institute, Northeastern University

Co-authored papers 8

Nevan J Krogan (CM4AI)

University of California San Francisco

Co-authored papers 4

Stefanie J??ger

Institute of Molecular Biosciences, Goethe University Frankfurt

Co-authored papers 3

Marc Vidal

Blavatnik Institute, Harvard Medical School

Co-authored papers 3

Gwendolyn M Jang

Gladstone Institute of Data Science and Biotechnology, J. David Gladstone Institutes

Co-authored papers 3

Peter Cimermancic

Verily Life Sciences LLC

Co-authored papers 3

Alan D Frankel

University of California san francisco

Co-authored papers 2

Michael Shales

University of California, USA Quantitative Biosciences Institute (QBI) san francisco

Co-authored papers 2

Tom Alber

University of California berkeley

Co-authored papers 2

Frederick P Roth

University of Toronto

Co-authored papers 2

Jessica C Mar

Australian Institute for Bioengineering and Nanotechnology, University of Queensland

Co-authored papers 2

Orit Rozenblatt-Rosen

Co-authored papers 2

Rick Tearle

Davies Livestock Research Centre, University of Adelaide

Co-authored papers 2

John Von Dollen

University of California San Francisco

Co-authored papers 2

Jason D Fernandes

University of California san francisco

Co-authored papers 2

J??rg Menche

CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences

Co-authored papers 2

John Quackenbush

Harvard T. H. Chan School of Public Health

Co-authored papers 2

Erik Verschueren

University of California San Francisco

Co-authored papers 2

Iv??n D'Orso

University of Texas Southwestern Medical Center

Co-authored papers 2

Jeffrey R Johnson

Gladstone Institutes

Co-authored papers 2

Andrej Sali (CM4AI)

University of California San Francisco

Co-authored papers 2

Melanie L Stephens

University of California san francisco

Co-authored papers 1

John Marlett

Salk Institute for Biological Studies

Co-authored papers 1

Jennifer McDaniel

National Institute of Standards and Technology

Co-authored papers 1

Keyan Zhao

Co-authored papers 1

Srinka Ghosh

Co-authored papers 1

Michael N Starnbach

Harvard Medical School

Co-authored papers 1

Marju Orho-Melander

Co-authored papers 1

Anthony J O'Donoghue

Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California

Co-authored papers 1

Wesley I Sundquist

University of Utah School of Medicine

Co-authored papers 1

1 - 30

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