Author details

Full Name

Robert J Dodson

Affiliation

Northwestern University Biomedical Informatics Center and Center for Genetic Medicine

ORCID

Career Start Year

1997

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
31840793	dictyBase and the Dicty Stock Center (version 2.0) - a progress report.	Int J Dev Biol	2019
31840793	dictyBase and the Dicty Stock Center (version 2.0) - a progress report.	Int J Dev Biol	2019
26088819	dictyBase 2015: Expanding data and annotations in a new software environment.	Genesis	2015
26088819	dictyBase 2015: Expanding data and annotations in a new software environment.	Genesis	2015
23327936	An overview of the BioCreative 2012 Workshop Track III: interactive text mining task.	Database (Oxford)	2013
23172289	DictyBase 2013: integrating multiple Dictyostelid species.	Nucleic Acids Res	2013
23327936	An overview of the BioCreative 2012 Workshop Track III: interactive text mining task.	Database (Oxford)	2013
23494302	One stop shop for everything Dictyostelium: dictyBase and the Dicty Stock Center in 2012.	Methods Mol Biol	2013
23494302	One stop shop for everything Dictyostelium: dictyBase and the Dicty Stock Center in 2012.	Methods Mol Biol	2013
23172289	DictyBase 2013: integrating multiple Dictyostelid species.	Nucleic Acids Res	2013
22140108	CharProtDB: a database of experimentally characterized protein annotations.	Nucleic Acids Res	2012
23160413	Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR.	Database (Oxford)	2012
22140108	CharProtDB: a database of experimentally characterized protein annotations.	Nucleic Acids Res	2012
23160413	Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR.	Database (Oxford)	2012
21087999	dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa.	Nucleic Acids Res	2011
21087999	dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa.	Nucleic Acids Res	2011
20107499	Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7.	PLoS One	2010
19843611	Pathema: a clade-specific bioinformatics resource center for pathogen research.	Nucleic Acids Res	2010
20107499	Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7.	PLoS One	2010
19843611	Pathema: a clade-specific bioinformatics resource center for pathogen research.	Nucleic Acids Res	2010
19201974	Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.	Appl Environ Microbiol	2009
19201974	Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.	Appl Environ Microbiol	2009
18654632	Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice.	PLoS Genet	2008
19077236	Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications.	BMC Genomics	2008
18654632	Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice.	PLoS Genet	2008
19077236	Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications.	BMC Genomics	2008
16980487	Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus.	J Bacteriol	2006
16938853	Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment.	Proc Natl Acad Sci U S A	2006
16980487	Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus.	J Bacteriol	2006
16825665	Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens.	Genome Res	2006
16825665	Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens.	Genome Res	2006
16938853	Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment.	Proc Natl Acad Sci U S A	2006
15774886	Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain.	J Bacteriol	2005
16159782	Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition.	J Bacteriol	2005
15774886	Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain.	J Bacteriol	2005
15660156	Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species.	PLoS Biol	2005
15980861	Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5.	Nat Biotechnol	2005
15637277	Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes.	Science	2005
16172379	Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome".	Proc Natl Acad Sci U S A	2005
16043709	The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.	Proc Natl Acad Sci U S A	2005
16311624	Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901.	PLoS Genet	2005
16159782	Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition.	J Bacteriol	2005
16172379	Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome".	Proc Natl Acad Sci U S A	2005
16311624	Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901.	PLoS Genet	2005
16043709	The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.	Proc Natl Acad Sci U S A	2005
15980861	Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5.	Nat Biotechnol	2005
15637277	Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes.	Science	2005
15660156	Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species.	PLoS Biol	2005
15064399	Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes.	Proc Natl Acad Sci U S A	2004
15602564	Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment.	Nature	2004

1 - 50 of 106

Yan Xu

Los Alamos National Laboratory

Career Start Year 2013

Number of shared co-authors 1

Neha Varghese

Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory

Career Start Year 2011

Number of shared co-authors 3

Corey M Hudson

Informatics Institute, University of Missouri

Career Start Year 2011

Number of shared co-authors 0

Karen W Davenport

Los Alamos National Laboratory

Career Start Year 2010

Number of shared co-authors 4

Chien-Chi Lo

Los Alamos National Laboratory

Career Start Year 2009

Number of shared co-authors 1

Shweta Deshpande

Cleveland Clinic Akron General Medical Center

Career Start Year 2007

Number of shared co-authors 5

Amrita Pati

Department of Energy (DOE) Joint Genome Institute

Career Start Year 2006

Number of shared co-authors 14

Katherine Huang

Broad Institute of MIT and Harvard

Career Start Year 2004

Number of shared co-authors 4

Morgan N Price

Lawrence Berkeley National Laboratory

Career Start Year 2004

Number of shared co-authors 3

Marisa F Nicol??s

Career Start Year 2004

Number of shared co-authors 1

Luiz Gonzaga Paula de Almeida

Center for Implant Dentistry, University of Florida

Career Start Year 2004

Number of shared co-authors 2

David Vallenet

Institut Francois Jacob, CNRS, Universite d'Evry, Universite Paris-Saclay

Career Start Year 2003

Number of shared co-authors 4

Ivan Erill

University of Maryland

Career Start Year 2002

Number of shared co-authors 5

Aaron A Best

Hope College

Career Start Year 2001

Number of shared co-authors 3

Paramvir S Dehal

Lawrence Berkeley National Laboratory

Career Start Year 2001

Number of shared co-authors 5

Patrick S G Chain

Los Alamos National Laboratory

Career Start Year 2000

Number of shared co-authors 14

Jo??o C Setubal

Chemistry Institute, Universidade de Sao Paulo - USP

Career Start Year 2000

Number of shared co-authors 13

Karen Moore

University of Exeter

Career Start Year 2000

Number of shared co-authors 0

Ana Tereza Ribeiro de Vasconcelos

The National Laboratory for Scientific Computing (LNCC)

Career Start Year 1997

Number of shared co-authors 2

Tbk Reddy

DOE Joint Genome Institute, Lawrence Berkeley National Laboratory

Career Start Year 1997

Number of shared co-authors 8

Konstantinos Mavromatis

Celgene Corporation

Career Start Year 1997

Number of shared co-authors 4

Folker Meyer

Institute for Artificial Intelligence, University of Duisburg-Essen

Career Start Year 1996

Number of shared co-authors 15

Fiona S L Brinkman

Simon Fraser University

Career Start Year 1995

Number of shared co-authors 5

Sandra W Clifton

Garvan Institute of Medical Research

Career Start Year 1994

Number of shared co-authors 19

Nicole T Perna

Center for Genomic Science Innovation, University of Wisconsin-Madison

Career Start Year 1992

Number of shared co-authors 2

Lee Ann McCue

Pacific Northwest National Laboratory

Career Start Year 1991

Number of shared co-authors 0

Istv??n Nagy

Institute of Biochemistry, HUN-REN Biological Research Centre

Career Start Year 1991

Number of shared co-authors 0

Miriam Land

Oak Ridge National Laboratory

Career Start Year 1990

Number of shared co-authors 10

Alla Lapidus

Center for Algorithmic Biotechnology, Saint Petersburg State University

Career Start Year 1982

Number of shared co-authors 15

Peter J A Cock

James Hutton Institute

Career Start Year 1974

Number of shared co-authors 1

row(s) 1 - 30 of 30

Claire M Fraser

Institute for Genome Sciences, University of Maryland School of Medicine

Co-authored papers 33

William C Nelson

Pacific Northwest National Laboratory

Co-authored papers 31

Daniel H Haft

National Center for Biotechnology Information, National Institutes of Health

Co-authored papers 27

Karen E Nelson

J. Craig Venter Institute, 9605 Medical Center Drive

Co-authored papers 25

Owen White

Institute for Genome Sciences, University of Maryland School of Medicine

Co-authored papers 24

Jonathan A Eisen

McLean Hospital

Co-authored papers 23

Ian T Paulsen

Macquarie University

Co-authored papers 23

Michelle Giglio

University of Maryland School of Medicine, Institute for Genome Sciences

Co-authored papers 22

Jeremy Peterson

The Institute for Genomic Research, 9712 Medical Center Drive

Co-authored papers 19

J C Venter

The J. Craig Venter Institute

Co-authored papers 12

Tanja M Davidsen

Co-authored papers 12

Steven L Salzberg

Center for Computational Biology, Johns Hopkins University

Co-authored papers 12

Jeremy D Selengut

Craig Venter Institute, 9704 Medical Center Drive

Co-authored papers 11

Hamilton O Smith

J. Craig Venter Institute

Co-authored papers 10

Karen A Ketchum

Yale University School of Medicine

Co-authored papers 9

Petra Fey

Center for Genetic Medicine, Northwestern University.

Co-authored papers 7

Delwood Richardson

Co-authored papers 7

Jessica Vamathevan

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 7

Jonathan H Badger

Center for Cancer Research, National Cancer Institute, National Institutes of Health

Co-authored papers 6

Rex L Chisholm

Center for Genetic Medicine, Feinberg School of Medicine, Northwestern University

Co-authored papers 6

Siddhartha Basu

West Bengal University of Animal and Fishery Sciences

Co-authored papers 6

Granger G Sutton

J. Craig Venter Institute

Co-authored papers 5

Samuel V Angiuoli

Personal Genome Diagnostics Inc.

Co-authored papers 4

Anthony R Kerlavage

National Cancer Institute

Co-authored papers 3

Mark D Adams

Case Western Reserve University School of Medicine

Co-authored papers 3

Granger Sutton

J. Craig Venter Institute

Co-authored papers 3

John Quackenbush

Harvard T. H. Chan School of Public Health

Co-authored papers 3

Jonathan Crabtree

Institute for Genome Sciences, University of Maryland School of Medicine

Co-authored papers 3

Jeannine D Gocayne

National Institute of Neurological and Communicative Disorders and Stroke

Co-authored papers 3

Erik Holtzapple

University of Saskatchewan

Co-authored papers 3

1 - 30

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